GO Enrichment Analysis of Co-expressed Genes with
AT3G05970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001881: receptor recycling | 0.00E+00 |
| 2 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 7.22E-10 |
| 4 | GO:0018279: protein N-linked glycosylation via asparagine | 4.47E-06 |
| 5 | GO:0046686: response to cadmium ion | 6.62E-06 |
| 6 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 6.91E-06 |
| 7 | GO:0071586: CAAX-box protein processing | 4.88E-05 |
| 8 | GO:0019628: urate catabolic process | 4.88E-05 |
| 9 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 4.88E-05 |
| 10 | GO:0035494: SNARE complex disassembly | 4.88E-05 |
| 11 | GO:0006144: purine nucleobase metabolic process | 4.88E-05 |
| 12 | GO:0080120: CAAX-box protein maturation | 4.88E-05 |
| 13 | GO:0051603: proteolysis involved in cellular protein catabolic process | 9.55E-05 |
| 14 | GO:0000162: tryptophan biosynthetic process | 1.07E-04 |
| 15 | GO:0006695: cholesterol biosynthetic process | 1.20E-04 |
| 16 | GO:0010372: positive regulation of gibberellin biosynthetic process | 1.20E-04 |
| 17 | GO:0051788: response to misfolded protein | 1.20E-04 |
| 18 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.63E-04 |
| 19 | GO:0009411: response to UV | 1.79E-04 |
| 20 | GO:0008333: endosome to lysosome transport | 2.06E-04 |
| 21 | GO:0010359: regulation of anion channel activity | 2.06E-04 |
| 22 | GO:0009647: skotomorphogenesis | 3.01E-04 |
| 23 | GO:0010483: pollen tube reception | 4.04E-04 |
| 24 | GO:0010363: regulation of plant-type hypersensitive response | 4.04E-04 |
| 25 | GO:0006564: L-serine biosynthetic process | 5.13E-04 |
| 26 | GO:0009826: unidimensional cell growth | 5.32E-04 |
| 27 | GO:0043248: proteasome assembly | 6.29E-04 |
| 28 | GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity | 6.29E-04 |
| 29 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 7.50E-04 |
| 30 | GO:0000054: ribosomal subunit export from nucleus | 7.50E-04 |
| 31 | GO:0048528: post-embryonic root development | 8.75E-04 |
| 32 | GO:0007050: cell cycle arrest | 8.75E-04 |
| 33 | GO:0045454: cell redox homeostasis | 9.09E-04 |
| 34 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.01E-03 |
| 35 | GO:0006402: mRNA catabolic process | 1.01E-03 |
| 36 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.01E-03 |
| 37 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 1.14E-03 |
| 38 | GO:0006526: arginine biosynthetic process | 1.14E-03 |
| 39 | GO:0009809: lignin biosynthetic process | 1.23E-03 |
| 40 | GO:2000652: regulation of secondary cell wall biogenesis | 1.75E-03 |
| 41 | GO:0072593: reactive oxygen species metabolic process | 1.75E-03 |
| 42 | GO:0006820: anion transport | 1.91E-03 |
| 43 | GO:0006829: zinc II ion transport | 2.08E-03 |
| 44 | GO:0009735: response to cytokinin | 2.15E-03 |
| 45 | GO:0034605: cellular response to heat | 2.26E-03 |
| 46 | GO:0007034: vacuolar transport | 2.26E-03 |
| 47 | GO:0007031: peroxisome organization | 2.44E-03 |
| 48 | GO:0042744: hydrogen peroxide catabolic process | 2.45E-03 |
| 49 | GO:0034976: response to endoplasmic reticulum stress | 2.62E-03 |
| 50 | GO:0042023: DNA endoreduplication | 2.62E-03 |
| 51 | GO:0006487: protein N-linked glycosylation | 2.81E-03 |
| 52 | GO:0055085: transmembrane transport | 3.26E-03 |
| 53 | GO:0040007: growth | 3.61E-03 |
| 54 | GO:0055114: oxidation-reduction process | 3.75E-03 |
| 55 | GO:0009561: megagametogenesis | 3.82E-03 |
| 56 | GO:0009306: protein secretion | 3.82E-03 |
| 57 | GO:0010089: xylem development | 3.82E-03 |
| 58 | GO:0042147: retrograde transport, endosome to Golgi | 4.04E-03 |
| 59 | GO:0010118: stomatal movement | 4.26E-03 |
| 60 | GO:0006606: protein import into nucleus | 4.26E-03 |
| 61 | GO:0008360: regulation of cell shape | 4.48E-03 |
| 62 | GO:0048868: pollen tube development | 4.48E-03 |
| 63 | GO:0061025: membrane fusion | 4.71E-03 |
| 64 | GO:0006623: protein targeting to vacuole | 4.94E-03 |
| 65 | GO:0048825: cotyledon development | 4.94E-03 |
| 66 | GO:0016132: brassinosteroid biosynthetic process | 5.18E-03 |
| 67 | GO:0031047: gene silencing by RNA | 5.42E-03 |
| 68 | GO:0030163: protein catabolic process | 5.66E-03 |
| 69 | GO:0009567: double fertilization forming a zygote and endosperm | 5.91E-03 |
| 70 | GO:0016579: protein deubiquitination | 6.42E-03 |
| 71 | GO:0016126: sterol biosynthetic process | 6.67E-03 |
| 72 | GO:0010311: lateral root formation | 8.31E-03 |
| 73 | GO:0006811: ion transport | 8.60E-03 |
| 74 | GO:0006499: N-terminal protein myristoylation | 8.60E-03 |
| 75 | GO:0006397: mRNA processing | 8.67E-03 |
| 76 | GO:0010119: regulation of stomatal movement | 8.88E-03 |
| 77 | GO:0010043: response to zinc ion | 8.88E-03 |
| 78 | GO:0030001: metal ion transport | 1.04E-02 |
| 79 | GO:0006855: drug transmembrane transport | 1.26E-02 |
| 80 | GO:0009664: plant-type cell wall organization | 1.33E-02 |
| 81 | GO:0009736: cytokinin-activated signaling pathway | 1.40E-02 |
| 82 | GO:0006096: glycolytic process | 1.57E-02 |
| 83 | GO:0045893: positive regulation of transcription, DNA-templated | 1.70E-02 |
| 84 | GO:0009553: embryo sac development | 1.76E-02 |
| 85 | GO:0009624: response to nematode | 1.79E-02 |
| 86 | GO:0018105: peptidyl-serine phosphorylation | 1.83E-02 |
| 87 | GO:0006413: translational initiation | 2.52E-02 |
| 88 | GO:0040008: regulation of growth | 2.56E-02 |
| 89 | GO:0009651: response to salt stress | 2.72E-02 |
| 90 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.87E-02 |
| 91 | GO:0007166: cell surface receptor signaling pathway | 2.91E-02 |
| 92 | GO:0009617: response to bacterium | 3.00E-02 |
| 93 | GO:0071555: cell wall organization | 3.00E-02 |
| 94 | GO:0006979: response to oxidative stress | 3.02E-02 |
| 95 | GO:0009723: response to ethylene | 4.01E-02 |
| 96 | GO:0048366: leaf development | 4.06E-02 |
| 97 | GO:0046777: protein autophosphorylation | 4.41E-02 |
| 98 | GO:0006886: intracellular protein transport | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 2 | GO:0009918: sterol delta7 reductase activity | 0.00E+00 |
| 3 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 4 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 5 | GO:0047598: 7-dehydrocholesterol reductase activity | 0.00E+00 |
| 6 | GO:0004298: threonine-type endopeptidase activity | 2.33E-08 |
| 7 | GO:0008233: peptidase activity | 3.90E-06 |
| 8 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 4.47E-06 |
| 9 | GO:0036402: proteasome-activating ATPase activity | 6.91E-06 |
| 10 | GO:0004048: anthranilate phosphoribosyltransferase activity | 4.88E-05 |
| 11 | GO:0015157: oligosaccharide transmembrane transporter activity | 4.88E-05 |
| 12 | GO:0017025: TBP-class protein binding | 9.42E-05 |
| 13 | GO:0008517: folic acid transporter activity | 1.20E-04 |
| 14 | GO:0004640: phosphoribosylanthranilate isomerase activity | 1.20E-04 |
| 15 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.20E-04 |
| 16 | GO:0004848: ureidoglycolate hydrolase activity | 2.06E-04 |
| 17 | GO:0004557: alpha-galactosidase activity | 2.06E-04 |
| 18 | GO:0052692: raffinose alpha-galactosidase activity | 2.06E-04 |
| 19 | GO:0005483: soluble NSF attachment protein activity | 2.06E-04 |
| 20 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.01E-04 |
| 21 | GO:0019905: syntaxin binding | 4.04E-04 |
| 22 | GO:0004601: peroxidase activity | 5.57E-04 |
| 23 | GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity | 6.29E-04 |
| 24 | GO:0030332: cyclin binding | 6.29E-04 |
| 25 | GO:0051920: peroxiredoxin activity | 7.50E-04 |
| 26 | GO:0004656: procollagen-proline 4-dioxygenase activity | 7.50E-04 |
| 27 | GO:0015288: porin activity | 1.01E-03 |
| 28 | GO:0016209: antioxidant activity | 1.01E-03 |
| 29 | GO:0003843: 1,3-beta-D-glucan synthase activity | 1.14E-03 |
| 30 | GO:0008308: voltage-gated anion channel activity | 1.14E-03 |
| 31 | GO:0004743: pyruvate kinase activity | 1.43E-03 |
| 32 | GO:0030955: potassium ion binding | 1.43E-03 |
| 33 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.59E-03 |
| 34 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.75E-03 |
| 35 | GO:0008559: xenobiotic-transporting ATPase activity | 1.75E-03 |
| 36 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.08E-03 |
| 37 | GO:0004175: endopeptidase activity | 2.26E-03 |
| 38 | GO:0031418: L-ascorbic acid binding | 2.81E-03 |
| 39 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 3.20E-03 |
| 40 | GO:0003756: protein disulfide isomerase activity | 3.82E-03 |
| 41 | GO:0000287: magnesium ion binding | 4.47E-03 |
| 42 | GO:0003713: transcription coactivator activity | 4.48E-03 |
| 43 | GO:0046873: metal ion transmembrane transporter activity | 4.48E-03 |
| 44 | GO:0016853: isomerase activity | 4.71E-03 |
| 45 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 5.18E-03 |
| 46 | GO:0004518: nuclease activity | 5.42E-03 |
| 47 | GO:0008237: metallopeptidase activity | 6.16E-03 |
| 48 | GO:0016597: amino acid binding | 6.42E-03 |
| 49 | GO:0005524: ATP binding | 6.74E-03 |
| 50 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 7.20E-03 |
| 51 | GO:0004683: calmodulin-dependent protein kinase activity | 7.48E-03 |
| 52 | GO:0003924: GTPase activity | 8.31E-03 |
| 53 | GO:0004222: metalloendopeptidase activity | 8.60E-03 |
| 54 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.47E-03 |
| 55 | GO:0016887: ATPase activity | 1.29E-02 |
| 56 | GO:0051287: NAD binding | 1.30E-02 |
| 57 | GO:0015035: protein disulfide oxidoreductase activity | 1.83E-02 |
| 58 | GO:0008026: ATP-dependent helicase activity | 1.87E-02 |
| 59 | GO:0005516: calmodulin binding | 2.23E-02 |
| 60 | GO:0005525: GTP binding | 2.44E-02 |
| 61 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.52E-02 |
| 62 | GO:0016301: kinase activity | 2.67E-02 |
| 63 | GO:0003743: translation initiation factor activity | 2.96E-02 |
| 64 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.14E-02 |
| 65 | GO:0003729: mRNA binding | 4.45E-02 |
| 66 | GO:0020037: heme binding | 4.71E-02 |
| 67 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 1.35E-11 |
| 2 | GO:0005839: proteasome core complex | 2.33E-08 |
| 3 | GO:0005773: vacuole | 4.30E-08 |
| 4 | GO:0005774: vacuolar membrane | 8.87E-07 |
| 5 | GO:0008250: oligosaccharyltransferase complex | 4.47E-06 |
| 6 | GO:0031597: cytosolic proteasome complex | 1.00E-05 |
| 7 | GO:0031595: nuclear proteasome complex | 1.39E-05 |
| 8 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.66E-05 |
| 9 | GO:0016442: RISC complex | 4.88E-05 |
| 10 | GO:0030176: integral component of endoplasmic reticulum membrane | 9.42E-05 |
| 11 | GO:0005829: cytosol | 1.02E-04 |
| 12 | GO:0001673: male germ cell nucleus | 1.20E-04 |
| 13 | GO:0030904: retromer complex | 6.29E-04 |
| 14 | GO:0005771: multivesicular body | 6.29E-04 |
| 15 | GO:0005794: Golgi apparatus | 1.05E-03 |
| 16 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.14E-03 |
| 17 | GO:0000148: 1,3-beta-D-glucan synthase complex | 1.14E-03 |
| 18 | GO:0046930: pore complex | 1.14E-03 |
| 19 | GO:0010494: cytoplasmic stress granule | 1.28E-03 |
| 20 | GO:0005635: nuclear envelope | 1.31E-03 |
| 21 | GO:0005783: endoplasmic reticulum | 1.61E-03 |
| 22 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.75E-03 |
| 23 | GO:0048471: perinuclear region of cytoplasm | 1.75E-03 |
| 24 | GO:0048046: apoplast | 1.89E-03 |
| 25 | GO:0005886: plasma membrane | 1.97E-03 |
| 26 | GO:0005618: cell wall | 2.19E-03 |
| 27 | GO:0005741: mitochondrial outer membrane | 3.20E-03 |
| 28 | GO:0009504: cell plate | 4.94E-03 |
| 29 | GO:0016020: membrane | 5.30E-03 |
| 30 | GO:0009506: plasmodesma | 5.67E-03 |
| 31 | GO:0000932: P-body | 6.67E-03 |
| 32 | GO:0009505: plant-type cell wall | 7.84E-03 |
| 33 | GO:0009507: chloroplast | 8.80E-03 |
| 34 | GO:0000325: plant-type vacuole | 8.88E-03 |
| 35 | GO:0005789: endoplasmic reticulum membrane | 1.01E-02 |
| 36 | GO:0031201: SNARE complex | 1.07E-02 |
| 37 | GO:0031902: late endosome membrane | 1.07E-02 |
| 38 | GO:0005730: nucleolus | 1.15E-02 |
| 39 | GO:0005654: nucleoplasm | 2.06E-02 |
| 40 | GO:0005623: cell | 2.14E-02 |
| 41 | GO:0005622: intracellular | 2.63E-02 |
| 42 | GO:0009536: plastid | 3.68E-02 |
| 43 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.86E-02 |
| 44 | GO:0009941: chloroplast envelope | 4.13E-02 |