Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G05660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019481: L-alanine catabolic process, by transamination0.00E+00
2GO:0009958: positive gravitropism2.03E-05
3GO:1902066: regulation of cell wall pectin metabolic process2.19E-05
4GO:0048586: regulation of long-day photoperiodism, flowering3.99E-05
5GO:0032922: circadian regulation of gene expression3.99E-05
6GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process3.99E-05
7GO:1901672: positive regulation of systemic acquired resistance3.99E-05
8GO:0010104: regulation of ethylene-activated signaling pathway6.14E-05
9GO:0006465: signal peptide processing1.12E-04
10GO:0006486: protein glycosylation1.35E-04
11GO:0048827: phyllome development1.41E-04
12GO:0006491: N-glycan processing2.37E-04
13GO:0048766: root hair initiation2.37E-04
14GO:0006487: protein N-linked glycosylation6.66E-04
15GO:2000022: regulation of jasmonic acid mediated signaling pathway7.99E-04
16GO:0051028: mRNA transport9.38E-04
17GO:0009789: positive regulation of abscisic acid-activated signaling pathway9.38E-04
18GO:0048364: root development9.77E-04
19GO:0048825: cotyledon development1.13E-03
20GO:0016579: protein deubiquitination1.45E-03
21GO:0001666: response to hypoxia1.50E-03
22GO:0035556: intracellular signal transduction1.71E-03
23GO:0048767: root hair elongation1.85E-03
24GO:0009631: cold acclimation1.97E-03
25GO:0006511: ubiquitin-dependent protein catabolic process2.19E-03
26GO:0006897: endocytosis2.36E-03
27GO:0009926: auxin polar transport2.49E-03
28GO:0042546: cell wall biogenesis2.56E-03
29GO:0008643: carbohydrate transport2.62E-03
30GO:0018105: peptidyl-serine phosphorylation3.94E-03
31GO:0006970: response to osmotic stress8.00E-03
32GO:0080167: response to karrikin8.82E-03
33GO:0046777: protein autophosphorylation9.25E-03
34GO:0009873: ethylene-activated signaling pathway1.39E-02
35GO:0009734: auxin-activated signaling pathway1.48E-02
36GO:0006457: protein folding2.09E-02
37GO:0006468: protein phosphorylation2.50E-02
38GO:0006355: regulation of transcription, DNA-templated2.79E-02
39GO:0009733: response to auxin3.13E-02
40GO:0015031: protein transport3.42E-02
41GO:0046686: response to cadmium ion3.95E-02
42GO:0007275: multicellular organism development4.67E-02
RankGO TermAdjusted P value
1GO:0008092: cytoskeletal protein binding0.00E+00
2GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity6.14E-05
3GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity6.14E-05
4GO:0004559: alpha-mannosidase activity1.71E-04
5GO:0005543: phospholipid binding4.19E-04
6GO:0008378: galactosyltransferase activity4.58E-04
7GO:0004175: endopeptidase activity5.39E-04
8GO:0036459: thiol-dependent ubiquitinyl hydrolase activity7.53E-04
9GO:0008514: organic anion transmembrane transporter activity8.91E-04
10GO:0004843: thiol-dependent ubiquitin-specific protease activity1.18E-03
11GO:0009931: calcium-dependent protein serine/threonine kinase activity1.62E-03
12GO:0004683: calmodulin-dependent protein kinase activity1.67E-03
13GO:0008236: serine-type peptidase activity1.73E-03
14GO:0005509: calcium ion binding2.99E-03
15GO:0016758: transferase activity, transferring hexosyl groups4.42E-03
16GO:0004672: protein kinase activity4.73E-03
17GO:0008233: peptidase activity8.71E-03
18GO:0003924: GTPase activity1.16E-02
19GO:0005516: calmodulin binding2.33E-02
20GO:0005525: GTP binding2.48E-02
21GO:0004842: ubiquitin-protein transferase activity3.63E-02
22GO:0003729: mRNA binding3.83E-02
RankGO TermAdjusted P value
1GO:0005794: Golgi apparatus7.67E-05
2GO:0009986: cell surface2.04E-04
3GO:0000139: Golgi membrane5.09E-04
4GO:0005905: clathrin-coated pit7.53E-04
5GO:0030136: clathrin-coated vesicle9.38E-04
6GO:0005856: cytoskeleton2.69E-03
7GO:0005768: endosome2.91E-03
8GO:0005654: nucleoplasm4.42E-03
9GO:0009534: chloroplast thylakoid1.99E-02
10GO:0005783: endoplasmic reticulum2.26E-02
11GO:0005802: trans-Golgi network2.44E-02
12GO:0005789: endoplasmic reticulum membrane3.90E-02
13GO:0005730: nucleolus4.19E-02
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Gene type



Gene DE type