Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G05360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
3GO:2000630: positive regulation of miRNA metabolic process0.00E+00
4GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
5GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
6GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
9GO:0009312: oligosaccharide biosynthetic process0.00E+00
10GO:0046865: terpenoid transport0.00E+00
11GO:0033587: shikimate biosynthetic process0.00E+00
12GO:2000636: positive regulation of primary miRNA processing0.00E+00
13GO:0032499: detection of peptidoglycan0.00E+00
14GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
15GO:0009751: response to salicylic acid6.76E-06
16GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.51E-05
17GO:0045227: capsule polysaccharide biosynthetic process1.01E-04
18GO:0033358: UDP-L-arabinose biosynthetic process1.01E-04
19GO:0010200: response to chitin1.06E-04
20GO:0042742: defense response to bacterium1.41E-04
21GO:0009737: response to abscisic acid1.57E-04
22GO:0009643: photosynthetic acclimation2.23E-04
23GO:0031930: mitochondria-nucleus signaling pathway3.00E-04
24GO:0009753: response to jasmonic acid3.12E-04
25GO:0031348: negative regulation of defense response3.18E-04
26GO:0015760: glucose-6-phosphate transport4.13E-04
27GO:0019567: arabinose biosynthetic process4.13E-04
28GO:0015969: guanosine tetraphosphate metabolic process4.13E-04
29GO:0006562: proline catabolic process4.13E-04
30GO:1901183: positive regulation of camalexin biosynthetic process4.13E-04
31GO:0032491: detection of molecule of fungal origin4.13E-04
32GO:1990542: mitochondrial transmembrane transport4.13E-04
33GO:0045010: actin nucleation4.85E-04
34GO:0010150: leaf senescence6.44E-04
35GO:0010112: regulation of systemic acquired resistance7.09E-04
36GO:0006470: protein dephosphorylation8.15E-04
37GO:1900426: positive regulation of defense response to bacterium8.37E-04
38GO:0010618: aerenchyma formation8.93E-04
39GO:0006527: arginine catabolic process8.93E-04
40GO:1902066: regulation of cell wall pectin metabolic process8.93E-04
41GO:0009727: detection of ethylene stimulus8.93E-04
42GO:0010115: regulation of abscisic acid biosynthetic process8.93E-04
43GO:0044419: interspecies interaction between organisms8.93E-04
44GO:0043066: negative regulation of apoptotic process8.93E-04
45GO:0015865: purine nucleotide transport8.93E-04
46GO:0015712: hexose phosphate transport8.93E-04
47GO:0010271: regulation of chlorophyll catabolic process8.93E-04
48GO:0019725: cellular homeostasis8.93E-04
49GO:0009446: putrescine biosynthetic process8.93E-04
50GO:0080183: response to photooxidative stress8.93E-04
51GO:0010155: regulation of proton transport8.93E-04
52GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.93E-04
53GO:0010133: proline catabolic process to glutamate8.93E-04
54GO:0009408: response to heat1.06E-03
55GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.45E-03
56GO:0015692: lead ion transport1.45E-03
57GO:0031022: nuclear migration along microfilament1.45E-03
58GO:0015714: phosphoenolpyruvate transport1.45E-03
59GO:0080168: abscisic acid transport1.45E-03
60GO:0048586: regulation of long-day photoperiodism, flowering1.45E-03
61GO:0032922: circadian regulation of gene expression1.45E-03
62GO:0010498: proteasomal protein catabolic process1.45E-03
63GO:0006954: inflammatory response1.45E-03
64GO:1901672: positive regulation of systemic acquired resistance1.45E-03
65GO:0034051: negative regulation of plant-type hypersensitive response1.45E-03
66GO:0035436: triose phosphate transmembrane transport1.45E-03
67GO:2000028: regulation of photoperiodism, flowering1.45E-03
68GO:0045836: positive regulation of meiotic nuclear division1.45E-03
69GO:0015783: GDP-fucose transport1.45E-03
70GO:0006970: response to osmotic stress1.58E-03
71GO:0009266: response to temperature stimulus1.64E-03
72GO:0009225: nucleotide-sugar metabolic process1.83E-03
73GO:0006468: protein phosphorylation2.00E-03
74GO:0046902: regulation of mitochondrial membrane permeability2.10E-03
75GO:0010104: regulation of ethylene-activated signaling pathway2.10E-03
76GO:0006537: glutamate biosynthetic process2.10E-03
77GO:0072583: clathrin-dependent endocytosis2.10E-03
78GO:0010731: protein glutathionylation2.10E-03
79GO:0071323: cellular response to chitin2.10E-03
80GO:0006986: response to unfolded protein2.10E-03
81GO:0010116: positive regulation of abscisic acid biosynthetic process2.10E-03
82GO:0009867: jasmonic acid mediated signaling pathway2.13E-03
83GO:0009863: salicylic acid mediated signaling pathway2.27E-03
84GO:0010109: regulation of photosynthesis2.82E-03
85GO:0060548: negative regulation of cell death2.82E-03
86GO:0071219: cellular response to molecule of bacterial origin2.82E-03
87GO:0015713: phosphoglycerate transport2.82E-03
88GO:0008295: spermidine biosynthetic process2.82E-03
89GO:0009902: chloroplast relocation2.82E-03
90GO:0080142: regulation of salicylic acid biosynthetic process2.82E-03
91GO:0009694: jasmonic acid metabolic process2.82E-03
92GO:0051707: response to other organism2.95E-03
93GO:2000022: regulation of jasmonic acid mediated signaling pathway3.01E-03
94GO:0071456: cellular response to hypoxia3.01E-03
95GO:0006012: galactose metabolic process3.29E-03
96GO:0009306: protein secretion3.58E-03
97GO:0006855: drug transmembrane transport3.59E-03
98GO:0009435: NAD biosynthetic process3.61E-03
99GO:0018344: protein geranylgeranylation3.61E-03
100GO:0010225: response to UV-C3.61E-03
101GO:0009247: glycolipid biosynthetic process3.61E-03
102GO:0045927: positive regulation of growth3.61E-03
103GO:0034052: positive regulation of plant-type hypersensitive response3.61E-03
104GO:0030041: actin filament polymerization3.61E-03
105GO:0048317: seed morphogenesis4.47E-03
106GO:0033365: protein localization to organelle4.47E-03
107GO:0010337: regulation of salicylic acid metabolic process4.47E-03
108GO:0006596: polyamine biosynthetic process4.47E-03
109GO:0009759: indole glucosinolate biosynthetic process4.47E-03
110GO:0010942: positive regulation of cell death4.47E-03
111GO:0009749: response to glucose5.21E-03
112GO:0010310: regulation of hydrogen peroxide metabolic process5.38E-03
113GO:0071470: cellular response to osmotic stress5.38E-03
114GO:0045926: negative regulation of growth5.38E-03
115GO:0009423: chorismate biosynthetic process5.38E-03
116GO:0010193: response to ozone5.58E-03
117GO:0046470: phosphatidylcholine metabolic process6.36E-03
118GO:1900056: negative regulation of leaf senescence6.36E-03
119GO:1900057: positive regulation of leaf senescence6.36E-03
120GO:1902074: response to salt6.36E-03
121GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.36E-03
122GO:0009624: response to nematode6.77E-03
123GO:0006904: vesicle docking involved in exocytosis7.19E-03
124GO:0010928: regulation of auxin mediated signaling pathway7.40E-03
125GO:0009787: regulation of abscisic acid-activated signaling pathway7.40E-03
126GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.40E-03
127GO:0009819: drought recovery7.40E-03
128GO:0043068: positive regulation of programmed cell death7.40E-03
129GO:0019375: galactolipid biosynthetic process7.40E-03
130GO:0031540: regulation of anthocyanin biosynthetic process7.40E-03
131GO:2000031: regulation of salicylic acid mediated signaling pathway8.49E-03
132GO:0010208: pollen wall assembly8.49E-03
133GO:0009932: cell tip growth8.49E-03
134GO:0010120: camalexin biosynthetic process8.49E-03
135GO:0030968: endoplasmic reticulum unfolded protein response8.49E-03
136GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.56E-03
137GO:0010029: regulation of seed germination8.56E-03
138GO:0009409: response to cold8.76E-03
139GO:0046777: protein autophosphorylation9.00E-03
140GO:0007338: single fertilization9.65E-03
141GO:0006098: pentose-phosphate shunt9.65E-03
142GO:0015780: nucleotide-sugar transport9.65E-03
143GO:0009845: seed germination9.98E-03
144GO:0009738: abscisic acid-activated signaling pathway1.04E-02
145GO:0010380: regulation of chlorophyll biosynthetic process1.09E-02
146GO:0008202: steroid metabolic process1.09E-02
147GO:0009611: response to wounding1.14E-02
148GO:0006499: N-terminal protein myristoylation1.17E-02
149GO:0006032: chitin catabolic process1.21E-02
150GO:0010119: regulation of stomatal movement1.22E-02
151GO:0009631: cold acclimation1.22E-02
152GO:0009414: response to water deprivation1.26E-02
153GO:0019684: photosynthesis, light reaction1.34E-02
154GO:0009682: induced systemic resistance1.34E-02
155GO:0009089: lysine biosynthetic process via diaminopimelate1.34E-02
156GO:0009073: aromatic amino acid family biosynthetic process1.34E-02
157GO:0000266: mitochondrial fission1.48E-02
158GO:0002213: defense response to insect1.48E-02
159GO:0045037: protein import into chloroplast stroma1.48E-02
160GO:0010105: negative regulation of ethylene-activated signaling pathway1.48E-02
161GO:0006887: exocytosis1.60E-02
162GO:0007166: cell surface receptor signaling pathway1.61E-02
163GO:0006829: zinc II ion transport1.62E-02
164GO:0006626: protein targeting to mitochondrion1.62E-02
165GO:0018107: peptidyl-threonine phosphorylation1.62E-02
166GO:0055046: microgametogenesis1.62E-02
167GO:0055085: transmembrane transport1.65E-02
168GO:0034605: cellular response to heat1.76E-02
169GO:0007034: vacuolar transport1.76E-02
170GO:0080188: RNA-directed DNA methylation1.91E-02
171GO:0010167: response to nitrate1.91E-02
172GO:0009901: anther dehiscence1.91E-02
173GO:0046688: response to copper ion1.91E-02
174GO:0046854: phosphatidylinositol phosphorylation1.91E-02
175GO:0016567: protein ubiquitination2.05E-02
176GO:0034976: response to endoplasmic reticulum stress2.06E-02
177GO:0042538: hyperosmotic salinity response2.18E-02
178GO:0006812: cation transport2.18E-02
179GO:0080147: root hair cell development2.22E-02
180GO:0045333: cellular respiration2.22E-02
181GO:2000377: regulation of reactive oxygen species metabolic process2.22E-02
182GO:0006825: copper ion transport2.38E-02
183GO:0051321: meiotic cell cycle2.55E-02
184GO:0016998: cell wall macromolecule catabolic process2.55E-02
185GO:0010017: red or far-red light signaling pathway2.72E-02
186GO:0009723: response to ethylene2.84E-02
187GO:0071369: cellular response to ethylene stimulus2.89E-02
188GO:0009625: response to insect2.89E-02
189GO:0009626: plant-type hypersensitive response2.96E-02
190GO:0010584: pollen exine formation3.07E-02
191GO:0009561: megagametogenesis3.07E-02
192GO:0080167: response to karrikin3.10E-02
193GO:0016192: vesicle-mediated transport3.30E-02
194GO:0018105: peptidyl-serine phosphorylation3.44E-02
195GO:0042391: regulation of membrane potential3.44E-02
196GO:0009960: endosperm development3.63E-02
197GO:0006885: regulation of pH3.63E-02
198GO:0035556: intracellular signal transduction3.71E-02
199GO:0071554: cell wall organization or biogenesis4.21E-02
200GO:0002229: defense response to oomycetes4.21E-02
201GO:0007264: small GTPase mediated signal transduction4.41E-02
202GO:0019761: glucosinolate biosynthetic process4.41E-02
203GO:0009567: double fertilization forming a zygote and endosperm4.83E-02
RankGO TermAdjusted P value
1GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
2GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
3GO:0008734: L-aspartate oxidase activity0.00E+00
4GO:0080131: hydroxyjasmonate sulfotransferase activity0.00E+00
5GO:0005522: profilin binding0.00E+00
6GO:0004107: chorismate synthase activity0.00E+00
7GO:0005212: structural constituent of eye lens0.00E+00
8GO:2001080: chitosan binding0.00E+00
9GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
10GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.24E-06
11GO:0050373: UDP-arabinose 4-epimerase activity1.01E-04
12GO:0005509: calcium ion binding1.07E-04
13GO:0016301: kinase activity1.76E-04
14GO:0003978: UDP-glucose 4-epimerase activity3.00E-04
15GO:0032050: clathrin heavy chain binding4.13E-04
16GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.13E-04
17GO:0004662: CAAX-protein geranylgeranyltransferase activity4.13E-04
18GO:0004657: proline dehydrogenase activity4.13E-04
19GO:0008792: arginine decarboxylase activity4.13E-04
20GO:0046481: digalactosyldiacylglycerol synthase activity4.13E-04
21GO:0010285: L,L-diaminopimelate aminotransferase activity4.13E-04
22GO:0005524: ATP binding6.44E-04
23GO:0015152: glucose-6-phosphate transmembrane transporter activity8.93E-04
24GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity8.93E-04
25GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity8.93E-04
26GO:0032934: sterol binding8.93E-04
27GO:0048531: beta-1,3-galactosyltransferase activity8.93E-04
28GO:0015036: disulfide oxidoreductase activity8.93E-04
29GO:0008728: GTP diphosphokinase activity8.93E-04
30GO:0047364: desulfoglucosinolate sulfotransferase activity8.93E-04
31GO:0004568: chitinase activity9.73E-04
32GO:0042626: ATPase activity, coupled to transmembrane movement of substances9.81E-04
33GO:0004674: protein serine/threonine kinase activity1.02E-03
34GO:0008559: xenobiotic-transporting ATPase activity1.12E-03
35GO:0016531: copper chaperone activity1.45E-03
36GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.45E-03
37GO:0071917: triose-phosphate transmembrane transporter activity1.45E-03
38GO:0005457: GDP-fucose transmembrane transporter activity1.45E-03
39GO:0008146: sulfotransferase activity1.83E-03
40GO:0017077: oxidative phosphorylation uncoupler activity2.10E-03
41GO:0035250: UDP-galactosyltransferase activity2.10E-03
42GO:0043565: sequence-specific DNA binding2.72E-03
43GO:0015297: antiporter activity2.80E-03
44GO:0019199: transmembrane receptor protein kinase activity2.82E-03
45GO:0009916: alternative oxidase activity2.82E-03
46GO:0015120: phosphoglycerate transmembrane transporter activity2.82E-03
47GO:0004722: protein serine/threonine phosphatase activity3.27E-03
48GO:0004842: ubiquitin-protein transferase activity3.30E-03
49GO:0004040: amidase activity3.61E-03
50GO:0005496: steroid binding3.61E-03
51GO:0005471: ATP:ADP antiporter activity3.61E-03
52GO:0004012: phospholipid-translocating ATPase activity5.38E-03
53GO:0004656: procollagen-proline 4-dioxygenase activity5.38E-03
54GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.38E-03
55GO:0004714: transmembrane receptor protein tyrosine kinase activity7.40E-03
56GO:0008142: oxysterol binding8.49E-03
57GO:0004630: phospholipase D activity8.49E-03
58GO:0008271: secondary active sulfate transmembrane transporter activity8.49E-03
59GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity8.49E-03
60GO:0004430: 1-phosphatidylinositol 4-kinase activity8.49E-03
61GO:0008375: acetylglucosaminyltransferase activity9.04E-03
62GO:0005515: protein binding9.07E-03
63GO:0015238: drug transmembrane transporter activity1.11E-02
64GO:0015020: glucuronosyltransferase activity1.21E-02
65GO:0004713: protein tyrosine kinase activity1.21E-02
66GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.24E-02
67GO:0005543: phospholipid binding1.34E-02
68GO:0004712: protein serine/threonine/tyrosine kinase activity1.47E-02
69GO:0015116: sulfate transmembrane transporter activity1.48E-02
70GO:0005315: inorganic phosphate transmembrane transporter activity1.62E-02
71GO:0031072: heat shock protein binding1.62E-02
72GO:0030552: cAMP binding1.91E-02
73GO:0030553: cGMP binding1.91E-02
74GO:0008061: chitin binding1.91E-02
75GO:0031418: L-ascorbic acid binding2.22E-02
76GO:0001046: core promoter sequence-specific DNA binding2.22E-02
77GO:0051087: chaperone binding2.38E-02
78GO:0005216: ion channel activity2.38E-02
79GO:0008324: cation transmembrane transporter activity2.38E-02
80GO:0033612: receptor serine/threonine kinase binding2.55E-02
81GO:0003700: transcription factor activity, sequence-specific DNA binding3.05E-02
82GO:0016874: ligase activity3.14E-02
83GO:0003779: actin binding3.24E-02
84GO:0046872: metal ion binding3.27E-02
85GO:0015035: protein disulfide oxidoreductase activity3.44E-02
86GO:0030551: cyclic nucleotide binding3.44E-02
87GO:0005451: monovalent cation:proton antiporter activity3.44E-02
88GO:0005249: voltage-gated potassium channel activity3.44E-02
89GO:0046873: metal ion transmembrane transporter activity3.63E-02
90GO:0015299: solute:proton antiporter activity3.82E-02
91GO:0010181: FMN binding3.82E-02
92GO:0019901: protein kinase binding4.01E-02
93GO:0004197: cysteine-type endopeptidase activity4.41E-02
94GO:0015385: sodium:proton antiporter activity4.62E-02
95GO:0051015: actin filament binding4.62E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.31E-05
2GO:0016021: integral component of membrane1.44E-05
3GO:0005911: cell-cell junction4.13E-04
4GO:0005953: CAAX-protein geranylgeranyltransferase complex4.13E-04
5GO:0031314: extrinsic component of mitochondrial inner membrane8.93E-04
6GO:0008287: protein serine/threonine phosphatase complex1.45E-03
7GO:0030139: endocytic vesicle1.45E-03
8GO:0031902: late endosome membrane2.66E-03
9GO:0005743: mitochondrial inner membrane3.54E-03
10GO:0032580: Golgi cisterna membrane6.77E-03
11GO:0015030: Cajal body1.09E-02
12GO:0005789: endoplasmic reticulum membrane1.13E-02
13GO:0005740: mitochondrial envelope1.21E-02
14GO:0030125: clathrin vesicle coat1.21E-02
15GO:0000325: plant-type vacuole1.22E-02
16GO:0048471: perinuclear region of cytoplasm1.34E-02
17GO:0005578: proteinaceous extracellular matrix1.62E-02
18GO:0031012: extracellular matrix1.62E-02
19GO:0005794: Golgi apparatus1.66E-02
20GO:0005795: Golgi stack1.91E-02
21GO:0005758: mitochondrial intermembrane space2.22E-02
22GO:0070469: respiratory chain2.38E-02
23GO:0005741: mitochondrial outer membrane2.55E-02
24GO:0005770: late endosome3.63E-02
25GO:0000145: exocyst4.41E-02
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Gene type



Gene DE type