GO Enrichment Analysis of Co-expressed Genes with
AT3G05280
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046680: response to DDT | 0.00E+00 |
| 2 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 3 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 4 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 5 | GO:0072722: response to amitrole | 0.00E+00 |
| 6 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 7 | GO:0042964: thioredoxin reduction | 1.75E-04 |
| 8 | GO:0006680: glucosylceramide catabolic process | 1.75E-04 |
| 9 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 1.75E-04 |
| 10 | GO:0000032: cell wall mannoprotein biosynthetic process | 1.75E-04 |
| 11 | GO:0046686: response to cadmium ion | 1.97E-04 |
| 12 | GO:0055114: oxidation-reduction process | 2.13E-04 |
| 13 | GO:0051607: defense response to virus | 2.13E-04 |
| 14 | GO:0006886: intracellular protein transport | 3.19E-04 |
| 15 | GO:0009407: toxin catabolic process | 3.74E-04 |
| 16 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 3.96E-04 |
| 17 | GO:0051252: regulation of RNA metabolic process | 3.96E-04 |
| 18 | GO:0015709: thiosulfate transport | 3.96E-04 |
| 19 | GO:0071422: succinate transmembrane transport | 3.96E-04 |
| 20 | GO:0009805: coumarin biosynthetic process | 3.96E-04 |
| 21 | GO:0050684: regulation of mRNA processing | 3.96E-04 |
| 22 | GO:0006672: ceramide metabolic process | 3.96E-04 |
| 23 | GO:0010043: response to zinc ion | 3.98E-04 |
| 24 | GO:0006556: S-adenosylmethionine biosynthetic process | 6.47E-04 |
| 25 | GO:0032784: regulation of DNA-templated transcription, elongation | 6.47E-04 |
| 26 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 6.47E-04 |
| 27 | GO:0006065: UDP-glucuronate biosynthetic process | 6.47E-04 |
| 28 | GO:0006517: protein deglycosylation | 6.47E-04 |
| 29 | GO:0010476: gibberellin mediated signaling pathway | 6.47E-04 |
| 30 | GO:0010325: raffinose family oligosaccharide biosynthetic process | 6.47E-04 |
| 31 | GO:0010272: response to silver ion | 6.47E-04 |
| 32 | GO:0052546: cell wall pectin metabolic process | 6.47E-04 |
| 33 | GO:0033591: response to L-ascorbic acid | 6.47E-04 |
| 34 | GO:0016998: cell wall macromolecule catabolic process | 8.23E-04 |
| 35 | GO:0009298: GDP-mannose biosynthetic process | 9.23E-04 |
| 36 | GO:0070301: cellular response to hydrogen peroxide | 9.23E-04 |
| 37 | GO:0015729: oxaloacetate transport | 9.23E-04 |
| 38 | GO:1901002: positive regulation of response to salt stress | 1.22E-03 |
| 39 | GO:0010188: response to microbial phytotoxin | 1.22E-03 |
| 40 | GO:0009939: positive regulation of gibberellic acid mediated signaling pathway | 1.22E-03 |
| 41 | GO:1902584: positive regulation of response to water deprivation | 1.22E-03 |
| 42 | GO:0071423: malate transmembrane transport | 1.56E-03 |
| 43 | GO:0006564: L-serine biosynthetic process | 1.56E-03 |
| 44 | GO:0045927: positive regulation of growth | 1.56E-03 |
| 45 | GO:0045454: cell redox homeostasis | 1.59E-03 |
| 46 | GO:0035435: phosphate ion transmembrane transport | 1.91E-03 |
| 47 | GO:0006555: methionine metabolic process | 1.91E-03 |
| 48 | GO:0034389: lipid particle organization | 2.30E-03 |
| 49 | GO:0009082: branched-chain amino acid biosynthetic process | 2.30E-03 |
| 50 | GO:0009099: valine biosynthetic process | 2.30E-03 |
| 51 | GO:0080113: regulation of seed growth | 2.30E-03 |
| 52 | GO:0048444: floral organ morphogenesis | 2.30E-03 |
| 53 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.30E-03 |
| 54 | GO:0030643: cellular phosphate ion homeostasis | 2.30E-03 |
| 55 | GO:0008272: sulfate transport | 2.70E-03 |
| 56 | GO:0050829: defense response to Gram-negative bacterium | 2.70E-03 |
| 57 | GO:0080186: developmental vegetative growth | 2.70E-03 |
| 58 | GO:0071669: plant-type cell wall organization or biogenesis | 2.70E-03 |
| 59 | GO:0010150: leaf senescence | 2.77E-03 |
| 60 | GO:0050832: defense response to fungus | 3.12E-03 |
| 61 | GO:0006491: N-glycan processing | 3.13E-03 |
| 62 | GO:0006605: protein targeting | 3.13E-03 |
| 63 | GO:0009819: drought recovery | 3.13E-03 |
| 64 | GO:0010497: plasmodesmata-mediated intercellular transport | 3.58E-03 |
| 65 | GO:0019430: removal of superoxide radicals | 3.58E-03 |
| 66 | GO:0009097: isoleucine biosynthetic process | 3.58E-03 |
| 67 | GO:0009699: phenylpropanoid biosynthetic process | 3.58E-03 |
| 68 | GO:0006002: fructose 6-phosphate metabolic process | 3.58E-03 |
| 69 | GO:0009056: catabolic process | 4.05E-03 |
| 70 | GO:0006979: response to oxidative stress | 4.25E-03 |
| 71 | GO:2000280: regulation of root development | 4.54E-03 |
| 72 | GO:0043067: regulation of programmed cell death | 4.54E-03 |
| 73 | GO:0009098: leucine biosynthetic process | 4.54E-03 |
| 74 | GO:0042542: response to hydrogen peroxide | 4.75E-03 |
| 75 | GO:0051707: response to other organism | 4.95E-03 |
| 76 | GO:0006032: chitin catabolic process | 5.05E-03 |
| 77 | GO:0009688: abscisic acid biosynthetic process | 5.05E-03 |
| 78 | GO:0006415: translational termination | 5.58E-03 |
| 79 | GO:0000272: polysaccharide catabolic process | 5.58E-03 |
| 80 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 6.13E-03 |
| 81 | GO:0071365: cellular response to auxin stimulus | 6.13E-03 |
| 82 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 6.70E-03 |
| 83 | GO:0010102: lateral root morphogenesis | 6.70E-03 |
| 84 | GO:0006807: nitrogen compound metabolic process | 6.70E-03 |
| 85 | GO:0019853: L-ascorbic acid biosynthetic process | 7.89E-03 |
| 86 | GO:0010053: root epidermal cell differentiation | 7.89E-03 |
| 87 | GO:0034976: response to endoplasmic reticulum stress | 8.51E-03 |
| 88 | GO:0000162: tryptophan biosynthetic process | 8.51E-03 |
| 89 | GO:0009620: response to fungus | 8.66E-03 |
| 90 | GO:0051302: regulation of cell division | 9.80E-03 |
| 91 | GO:0006874: cellular calcium ion homeostasis | 9.80E-03 |
| 92 | GO:0009751: response to salicylic acid | 1.02E-02 |
| 93 | GO:0019915: lipid storage | 1.05E-02 |
| 94 | GO:0006730: one-carbon metabolic process | 1.12E-02 |
| 95 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.12E-02 |
| 96 | GO:0071456: cellular response to hypoxia | 1.12E-02 |
| 97 | GO:0019748: secondary metabolic process | 1.12E-02 |
| 98 | GO:0030245: cellulose catabolic process | 1.12E-02 |
| 99 | GO:0010227: floral organ abscission | 1.19E-02 |
| 100 | GO:0009693: ethylene biosynthetic process | 1.19E-02 |
| 101 | GO:0042147: retrograde transport, endosome to Golgi | 1.33E-02 |
| 102 | GO:0042631: cellular response to water deprivation | 1.41E-02 |
| 103 | GO:0006662: glycerol ether metabolic process | 1.49E-02 |
| 104 | GO:0045489: pectin biosynthetic process | 1.49E-02 |
| 105 | GO:0042742: defense response to bacterium | 1.52E-02 |
| 106 | GO:0048544: recognition of pollen | 1.56E-02 |
| 107 | GO:0009646: response to absence of light | 1.56E-02 |
| 108 | GO:0009851: auxin biosynthetic process | 1.64E-02 |
| 109 | GO:0006623: protein targeting to vacuole | 1.64E-02 |
| 110 | GO:0045490: pectin catabolic process | 1.65E-02 |
| 111 | GO:0010193: response to ozone | 1.72E-02 |
| 112 | GO:0000302: response to reactive oxygen species | 1.72E-02 |
| 113 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.72E-02 |
| 114 | GO:0071281: cellular response to iron ion | 1.89E-02 |
| 115 | GO:0006464: cellular protein modification process | 1.98E-02 |
| 116 | GO:0019760: glucosinolate metabolic process | 1.98E-02 |
| 117 | GO:0015031: protein transport | 2.18E-02 |
| 118 | GO:0009615: response to virus | 2.24E-02 |
| 119 | GO:0006974: cellular response to DNA damage stimulus | 2.42E-02 |
| 120 | GO:0009627: systemic acquired resistance | 2.42E-02 |
| 121 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.52E-02 |
| 122 | GO:0016049: cell growth | 2.61E-02 |
| 123 | GO:0016311: dephosphorylation | 2.61E-02 |
| 124 | GO:0008219: cell death | 2.71E-02 |
| 125 | GO:0009817: defense response to fungus, incompatible interaction | 2.71E-02 |
| 126 | GO:0006970: response to osmotic stress | 2.75E-02 |
| 127 | GO:0006457: protein folding | 2.97E-02 |
| 128 | GO:0007568: aging | 3.00E-02 |
| 129 | GO:0045087: innate immune response | 3.20E-02 |
| 130 | GO:0034599: cellular response to oxidative stress | 3.31E-02 |
| 131 | GO:0006099: tricarboxylic acid cycle | 3.31E-02 |
| 132 | GO:0016192: vesicle-mediated transport | 3.33E-02 |
| 133 | GO:0006839: mitochondrial transport | 3.52E-02 |
| 134 | GO:0006897: endocytosis | 3.62E-02 |
| 135 | GO:0009744: response to sucrose | 3.84E-02 |
| 136 | GO:0000209: protein polyubiquitination | 3.95E-02 |
| 137 | GO:0006869: lipid transport | 4.14E-02 |
| 138 | GO:0009636: response to toxic substance | 4.17E-02 |
| 139 | GO:0009965: leaf morphogenesis | 4.17E-02 |
| 140 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.39E-02 |
| 141 | GO:0009664: plant-type cell wall organization | 4.51E-02 |
| 142 | GO:0009846: pollen germination | 4.51E-02 |
| 143 | GO:0006629: lipid metabolic process | 4.65E-02 |
| 144 | GO:0006486: protein glycosylation | 4.74E-02 |
| 145 | GO:0009736: cytokinin-activated signaling pathway | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001729: ceramide kinase activity | 0.00E+00 |
| 2 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 3 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 4 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 5 | GO:0043295: glutathione binding | 1.05E-04 |
| 6 | GO:0004601: peroxidase activity | 1.38E-04 |
| 7 | GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | 1.75E-04 |
| 8 | GO:0004476: mannose-6-phosphate isomerase activity | 1.75E-04 |
| 9 | GO:0004348: glucosylceramidase activity | 1.75E-04 |
| 10 | GO:2001147: camalexin binding | 1.75E-04 |
| 11 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.75E-04 |
| 12 | GO:0004649: poly(ADP-ribose) glycohydrolase activity | 1.75E-04 |
| 13 | GO:2001227: quercitrin binding | 1.75E-04 |
| 14 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.75E-04 |
| 15 | GO:0008428: ribonuclease inhibitor activity | 3.96E-04 |
| 16 | GO:1990585: hydroxyproline O-arabinosyltransferase activity | 3.96E-04 |
| 17 | GO:0015117: thiosulfate transmembrane transporter activity | 3.96E-04 |
| 18 | GO:1901677: phosphate transmembrane transporter activity | 3.96E-04 |
| 19 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 3.96E-04 |
| 20 | GO:0052739: phosphatidylserine 1-acylhydrolase activity | 3.96E-04 |
| 21 | GO:0010331: gibberellin binding | 3.96E-04 |
| 22 | GO:0010297: heteropolysaccharide binding | 3.96E-04 |
| 23 | GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity | 3.96E-04 |
| 24 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.96E-04 |
| 25 | GO:0004364: glutathione transferase activity | 5.89E-04 |
| 26 | GO:0015141: succinate transmembrane transporter activity | 6.47E-04 |
| 27 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 6.47E-04 |
| 28 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 6.47E-04 |
| 29 | GO:0004478: methionine adenosyltransferase activity | 6.47E-04 |
| 30 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 6.47E-04 |
| 31 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 6.47E-04 |
| 32 | GO:0015131: oxaloacetate transmembrane transporter activity | 9.23E-04 |
| 33 | GO:0016149: translation release factor activity, codon specific | 9.23E-04 |
| 34 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 9.23E-04 |
| 35 | GO:0052656: L-isoleucine transaminase activity | 9.23E-04 |
| 36 | GO:0052654: L-leucine transaminase activity | 9.23E-04 |
| 37 | GO:0017077: oxidative phosphorylation uncoupler activity | 9.23E-04 |
| 38 | GO:0052655: L-valine transaminase activity | 9.23E-04 |
| 39 | GO:0070628: proteasome binding | 1.22E-03 |
| 40 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.22E-03 |
| 41 | GO:0004031: aldehyde oxidase activity | 1.22E-03 |
| 42 | GO:0050302: indole-3-acetaldehyde oxidase activity | 1.22E-03 |
| 43 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.22E-03 |
| 44 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.22E-03 |
| 45 | GO:0004791: thioredoxin-disulfide reductase activity | 1.42E-03 |
| 46 | GO:0008374: O-acyltransferase activity | 1.56E-03 |
| 47 | GO:0008948: oxaloacetate decarboxylase activity | 1.56E-03 |
| 48 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.91E-03 |
| 49 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.91E-03 |
| 50 | GO:0035252: UDP-xylosyltransferase activity | 1.91E-03 |
| 51 | GO:0004602: glutathione peroxidase activity | 2.30E-03 |
| 52 | GO:0051920: peroxiredoxin activity | 2.30E-03 |
| 53 | GO:0008320: protein transmembrane transporter activity | 2.70E-03 |
| 54 | GO:0003872: 6-phosphofructokinase activity | 2.70E-03 |
| 55 | GO:0015140: malate transmembrane transporter activity | 2.70E-03 |
| 56 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 3.13E-03 |
| 57 | GO:0016209: antioxidant activity | 3.13E-03 |
| 58 | GO:0003951: NAD+ kinase activity | 3.58E-03 |
| 59 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 3.58E-03 |
| 60 | GO:0003993: acid phosphatase activity | 4.02E-03 |
| 61 | GO:0003747: translation release factor activity | 4.05E-03 |
| 62 | GO:0045309: protein phosphorylated amino acid binding | 4.54E-03 |
| 63 | GO:0004568: chitinase activity | 5.05E-03 |
| 64 | GO:0005198: structural molecule activity | 5.56E-03 |
| 65 | GO:0019904: protein domain specific binding | 5.58E-03 |
| 66 | GO:0051287: NAD binding | 5.99E-03 |
| 67 | GO:0015116: sulfate transmembrane transporter activity | 6.13E-03 |
| 68 | GO:0031624: ubiquitin conjugating enzyme binding | 7.28E-03 |
| 69 | GO:0031625: ubiquitin protein ligase binding | 7.38E-03 |
| 70 | GO:0008061: chitin binding | 7.89E-03 |
| 71 | GO:0005217: intracellular ligand-gated ion channel activity | 7.89E-03 |
| 72 | GO:0004970: ionotropic glutamate receptor activity | 7.89E-03 |
| 73 | GO:0015035: protein disulfide oxidoreductase activity | 9.78E-03 |
| 74 | GO:0008810: cellulase activity | 1.19E-02 |
| 75 | GO:0003756: protein disulfide isomerase activity | 1.26E-02 |
| 76 | GO:0003727: single-stranded RNA binding | 1.26E-02 |
| 77 | GO:0047134: protein-disulfide reductase activity | 1.33E-02 |
| 78 | GO:0008565: protein transporter activity | 1.43E-02 |
| 79 | GO:0005199: structural constituent of cell wall | 1.49E-02 |
| 80 | GO:0030276: clathrin binding | 1.49E-02 |
| 81 | GO:0001085: RNA polymerase II transcription factor binding | 1.49E-02 |
| 82 | GO:0010181: FMN binding | 1.56E-02 |
| 83 | GO:0008289: lipid binding | 1.58E-02 |
| 84 | GO:0004518: nuclease activity | 1.81E-02 |
| 85 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.89E-02 |
| 86 | GO:0016791: phosphatase activity | 1.98E-02 |
| 87 | GO:0016597: amino acid binding | 2.15E-02 |
| 88 | GO:0051213: dioxygenase activity | 2.24E-02 |
| 89 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.52E-02 |
| 90 | GO:0004806: triglyceride lipase activity | 2.52E-02 |
| 91 | GO:0050660: flavin adenine dinucleotide binding | 2.95E-02 |
| 92 | GO:0030145: manganese ion binding | 3.00E-02 |
| 93 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.00E-02 |
| 94 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.00E-02 |
| 95 | GO:0030246: carbohydrate binding | 3.12E-02 |
| 96 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.20E-02 |
| 97 | GO:0003746: translation elongation factor activity | 3.20E-02 |
| 98 | GO:0061630: ubiquitin protein ligase activity | 3.33E-02 |
| 99 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.41E-02 |
| 100 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.06E-02 |
| 101 | GO:0046872: metal ion binding | 4.10E-02 |
| 102 | GO:0004722: protein serine/threonine phosphatase activity | 4.14E-02 |
| 103 | GO:0003924: GTPase activity | 4.65E-02 |
| 104 | GO:0005509: calcium ion binding | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030121: AP-1 adaptor complex | 0.00E+00 |
| 2 | GO:0045252: oxoglutarate dehydrogenase complex | 1.75E-04 |
| 3 | GO:0005789: endoplasmic reticulum membrane | 1.87E-04 |
| 4 | GO:0005886: plasma membrane | 2.57E-04 |
| 5 | GO:0009530: primary cell wall | 6.47E-04 |
| 6 | GO:0005783: endoplasmic reticulum | 1.04E-03 |
| 7 | GO:0005737: cytoplasm | 1.25E-03 |
| 8 | GO:0005945: 6-phosphofructokinase complex | 1.56E-03 |
| 9 | GO:0005794: Golgi apparatus | 2.50E-03 |
| 10 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 2.70E-03 |
| 11 | GO:0009986: cell surface | 2.70E-03 |
| 12 | GO:0030131: clathrin adaptor complex | 3.13E-03 |
| 13 | GO:0005811: lipid particle | 3.58E-03 |
| 14 | GO:0005773: vacuole | 3.97E-03 |
| 15 | GO:0031090: organelle membrane | 4.05E-03 |
| 16 | GO:0017119: Golgi transport complex | 5.05E-03 |
| 17 | GO:0005829: cytosol | 5.94E-03 |
| 18 | GO:0005905: clathrin-coated pit | 1.05E-02 |
| 19 | GO:0005839: proteasome core complex | 1.05E-02 |
| 20 | GO:0009506: plasmodesma | 1.41E-02 |
| 21 | GO:0019898: extrinsic component of membrane | 1.64E-02 |
| 22 | GO:0031965: nuclear membrane | 1.64E-02 |
| 23 | GO:0016021: integral component of membrane | 1.77E-02 |
| 24 | GO:0016592: mediator complex | 1.81E-02 |
| 25 | GO:0071944: cell periphery | 1.89E-02 |
| 26 | GO:0032580: Golgi cisterna membrane | 1.98E-02 |
| 27 | GO:0009505: plant-type cell wall | 2.13E-02 |
| 28 | GO:0005788: endoplasmic reticulum lumen | 2.33E-02 |
| 29 | GO:0000139: Golgi membrane | 2.39E-02 |
| 30 | GO:0005667: transcription factor complex | 2.42E-02 |
| 31 | GO:0000151: ubiquitin ligase complex | 2.71E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 2.71E-02 |
| 33 | GO:0005802: trans-Golgi network | 3.87E-02 |
| 34 | GO:0009570: chloroplast stroma | 4.20E-02 |
| 35 | GO:0005618: cell wall | 4.40E-02 |
| 36 | GO:0005768: endosome | 4.53E-02 |
| 37 | GO:0005635: nuclear envelope | 4.97E-02 |