GO Enrichment Analysis of Co-expressed Genes with
AT3G05090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 2 | GO:0036258: multivesicular body assembly | 0.00E+00 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.13E-08 |
| 4 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 7.27E-06 |
| 5 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 5.03E-05 |
| 6 | GO:0035494: SNARE complex disassembly | 5.03E-05 |
| 7 | GO:0080120: CAAX-box protein maturation | 5.03E-05 |
| 8 | GO:0071586: CAAX-box protein processing | 5.03E-05 |
| 9 | GO:0006695: cholesterol biosynthetic process | 1.23E-04 |
| 10 | GO:0051788: response to misfolded protein | 1.23E-04 |
| 11 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.70E-04 |
| 12 | GO:0043617: cellular response to sucrose starvation | 2.11E-04 |
| 13 | GO:0010186: positive regulation of cellular defense response | 2.11E-04 |
| 14 | GO:0009646: response to absence of light | 2.81E-04 |
| 15 | GO:0009647: skotomorphogenesis | 3.09E-04 |
| 16 | GO:0070676: intralumenal vesicle formation | 3.09E-04 |
| 17 | GO:0001676: long-chain fatty acid metabolic process | 3.09E-04 |
| 18 | GO:0046355: mannan catabolic process | 4.15E-04 |
| 19 | GO:0010363: regulation of plant-type hypersensitive response | 4.15E-04 |
| 20 | GO:0016579: protein deubiquitination | 4.40E-04 |
| 21 | GO:0018279: protein N-linked glycosylation via asparagine | 5.26E-04 |
| 22 | GO:0006564: L-serine biosynthetic process | 5.26E-04 |
| 23 | GO:0006461: protein complex assembly | 5.26E-04 |
| 24 | GO:0009826: unidimensional cell growth | 5.57E-04 |
| 25 | GO:0043248: proteasome assembly | 6.44E-04 |
| 26 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 7.68E-04 |
| 27 | GO:0048528: post-embryonic root development | 8.97E-04 |
| 28 | GO:0000338: protein deneddylation | 8.97E-04 |
| 29 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.03E-03 |
| 30 | GO:0006526: arginine biosynthetic process | 1.17E-03 |
| 31 | GO:0006972: hyperosmotic response | 1.17E-03 |
| 32 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 1.17E-03 |
| 33 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.32E-03 |
| 34 | GO:0090332: stomatal closure | 1.47E-03 |
| 35 | GO:0010072: primary shoot apical meristem specification | 1.79E-03 |
| 36 | GO:0072593: reactive oxygen species metabolic process | 1.79E-03 |
| 37 | GO:0006820: anion transport | 1.96E-03 |
| 38 | GO:0006829: zinc II ion transport | 2.14E-03 |
| 39 | GO:0009735: response to cytokinin | 2.26E-03 |
| 40 | GO:0042744: hydrogen peroxide catabolic process | 2.54E-03 |
| 41 | GO:0010089: xylem development | 3.93E-03 |
| 42 | GO:0009561: megagametogenesis | 3.93E-03 |
| 43 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 4.15E-03 |
| 44 | GO:0010051: xylem and phloem pattern formation | 4.37E-03 |
| 45 | GO:0008360: regulation of cell shape | 4.60E-03 |
| 46 | GO:0061025: membrane fusion | 4.83E-03 |
| 47 | GO:0048825: cotyledon development | 5.07E-03 |
| 48 | GO:0055072: iron ion homeostasis | 5.07E-03 |
| 49 | GO:0016132: brassinosteroid biosynthetic process | 5.32E-03 |
| 50 | GO:0010193: response to ozone | 5.32E-03 |
| 51 | GO:0030163: protein catabolic process | 5.81E-03 |
| 52 | GO:0006914: autophagy | 6.07E-03 |
| 53 | GO:0016126: sterol biosynthetic process | 6.85E-03 |
| 54 | GO:0009733: response to auxin | 7.16E-03 |
| 55 | GO:0006950: response to stress | 7.68E-03 |
| 56 | GO:0006888: ER to Golgi vesicle-mediated transport | 7.68E-03 |
| 57 | GO:0006811: ion transport | 8.82E-03 |
| 58 | GO:0010043: response to zinc ion | 9.12E-03 |
| 59 | GO:0009867: jasmonic acid mediated signaling pathway | 9.73E-03 |
| 60 | GO:0030001: metal ion transport | 1.07E-02 |
| 61 | GO:0006631: fatty acid metabolic process | 1.10E-02 |
| 62 | GO:0009744: response to sucrose | 1.16E-02 |
| 63 | GO:0009640: photomorphogenesis | 1.16E-02 |
| 64 | GO:0009664: plant-type cell wall organization | 1.37E-02 |
| 65 | GO:0009736: cytokinin-activated signaling pathway | 1.44E-02 |
| 66 | GO:0009809: lignin biosynthetic process | 1.44E-02 |
| 67 | GO:0009585: red, far-red light phototransduction | 1.44E-02 |
| 68 | GO:0006096: glycolytic process | 1.62E-02 |
| 69 | GO:0055085: transmembrane transport | 1.95E-02 |
| 70 | GO:0040008: regulation of growth | 2.63E-02 |
| 71 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.95E-02 |
| 72 | GO:0007166: cell surface receptor signaling pathway | 2.99E-02 |
| 73 | GO:0009617: response to bacterium | 3.08E-02 |
| 74 | GO:0071555: cell wall organization | 3.12E-02 |
| 75 | GO:0006979: response to oxidative stress | 3.14E-02 |
| 76 | GO:0015031: protein transport | 3.95E-02 |
| 77 | GO:0048366: leaf development | 4.17E-02 |
| 78 | GO:0045892: negative regulation of transcription, DNA-templated | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0047598: 7-dehydrocholesterol reductase activity | 0.00E+00 |
| 3 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 4 | GO:0009918: sterol delta7 reductase activity | 0.00E+00 |
| 5 | GO:0036402: proteasome-activating ATPase activity | 7.27E-06 |
| 6 | GO:0019786: Atg8-specific protease activity | 5.03E-05 |
| 7 | GO:0017025: TBP-class protein binding | 9.84E-05 |
| 8 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.23E-04 |
| 9 | GO:0019779: Atg8 activating enzyme activity | 1.23E-04 |
| 10 | GO:0004298: threonine-type endopeptidase activity | 1.54E-04 |
| 11 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 1.54E-04 |
| 12 | GO:0052692: raffinose alpha-galactosidase activity | 2.11E-04 |
| 13 | GO:0005483: soluble NSF attachment protein activity | 2.11E-04 |
| 14 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 2.11E-04 |
| 15 | GO:0004557: alpha-galactosidase activity | 2.11E-04 |
| 16 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.09E-04 |
| 17 | GO:0019776: Atg8 ligase activity | 4.15E-04 |
| 18 | GO:0019905: syntaxin binding | 4.15E-04 |
| 19 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 4.15E-04 |
| 20 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.26E-04 |
| 21 | GO:0031593: polyubiquitin binding | 6.44E-04 |
| 22 | GO:0008233: peptidase activity | 7.49E-04 |
| 23 | GO:0102391: decanoate--CoA ligase activity | 7.68E-04 |
| 24 | GO:0004467: long-chain fatty acid-CoA ligase activity | 8.97E-04 |
| 25 | GO:0015288: porin activity | 1.03E-03 |
| 26 | GO:0003843: 1,3-beta-D-glucan synthase activity | 1.17E-03 |
| 27 | GO:0008308: voltage-gated anion channel activity | 1.17E-03 |
| 28 | GO:0030955: potassium ion binding | 1.47E-03 |
| 29 | GO:0004743: pyruvate kinase activity | 1.47E-03 |
| 30 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.63E-03 |
| 31 | GO:0008026: ATP-dependent helicase activity | 1.90E-03 |
| 32 | GO:0004175: endopeptidase activity | 2.32E-03 |
| 33 | GO:0043130: ubiquitin binding | 2.88E-03 |
| 34 | GO:0046873: metal ion transmembrane transporter activity | 4.60E-03 |
| 35 | GO:0004601: peroxidase activity | 4.73E-03 |
| 36 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 5.32E-03 |
| 37 | GO:0004197: cysteine-type endopeptidase activity | 5.56E-03 |
| 38 | GO:0046872: metal ion binding | 6.25E-03 |
| 39 | GO:0008237: metallopeptidase activity | 6.33E-03 |
| 40 | GO:0016597: amino acid binding | 6.59E-03 |
| 41 | GO:0004222: metalloendopeptidase activity | 8.82E-03 |
| 42 | GO:0035091: phosphatidylinositol binding | 1.23E-02 |
| 43 | GO:0005198: structural molecule activity | 1.26E-02 |
| 44 | GO:0051287: NAD binding | 1.33E-02 |
| 45 | GO:0016887: ATPase activity | 1.34E-02 |
| 46 | GO:0016787: hydrolase activity | 1.63E-02 |
| 47 | GO:0005524: ATP binding | 1.79E-02 |
| 48 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.59E-02 |
| 49 | GO:0000287: magnesium ion binding | 3.66E-02 |
| 50 | GO:0003729: mRNA binding | 4.62E-02 |
| 51 | GO:0020037: heme binding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 7.20E-08 |
| 2 | GO:0031597: cytosolic proteasome complex | 1.05E-05 |
| 3 | GO:0031595: nuclear proteasome complex | 1.45E-05 |
| 4 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.83E-05 |
| 5 | GO:0030176: integral component of endoplasmic reticulum membrane | 9.84E-05 |
| 6 | GO:0005829: cytosol | 1.21E-04 |
| 7 | GO:0005839: proteasome core complex | 1.54E-04 |
| 8 | GO:0046861: glyoxysomal membrane | 2.11E-04 |
| 9 | GO:0005773: vacuole | 2.43E-04 |
| 10 | GO:0005775: vacuolar lumen | 3.09E-04 |
| 11 | GO:0005776: autophagosome | 4.15E-04 |
| 12 | GO:0005774: vacuolar membrane | 4.34E-04 |
| 13 | GO:0030126: COPI vesicle coat | 5.26E-04 |
| 14 | GO:0000813: ESCRT I complex | 5.26E-04 |
| 15 | GO:0008250: oligosaccharyltransferase complex | 5.26E-04 |
| 16 | GO:0000421: autophagosome membrane | 1.03E-03 |
| 17 | GO:0046930: pore complex | 1.17E-03 |
| 18 | GO:0009514: glyoxysome | 1.17E-03 |
| 19 | GO:0000148: 1,3-beta-D-glucan synthase complex | 1.17E-03 |
| 20 | GO:0008180: COP9 signalosome | 1.32E-03 |
| 21 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.79E-03 |
| 22 | GO:0005741: mitochondrial outer membrane | 3.29E-03 |
| 23 | GO:0031410: cytoplasmic vesicle | 3.50E-03 |
| 24 | GO:0009504: cell plate | 5.07E-03 |
| 25 | GO:0048046: apoplast | 8.22E-03 |
| 26 | GO:0005618: cell wall | 9.36E-03 |
| 27 | GO:0031902: late endosome membrane | 1.10E-02 |
| 28 | GO:0031201: SNARE complex | 1.10E-02 |
| 29 | GO:0016020: membrane | 1.50E-02 |
| 30 | GO:0009506: plasmodesma | 1.91E-02 |
| 31 | GO:0005886: plasma membrane | 2.23E-02 |
| 32 | GO:0005759: mitochondrial matrix | 2.54E-02 |
| 33 | GO:0009505: plant-type cell wall | 3.90E-02 |
| 34 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.96E-02 |
| 35 | GO:0005874: microtubule | 4.22E-02 |
| 36 | GO:0005789: endoplasmic reticulum membrane | 4.74E-02 |