GO Enrichment Analysis of Co-expressed Genes with
AT3G04780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031124: mRNA 3'-end processing | 2.00E-05 |
| 2 | GO:0002215: defense response to nematode | 2.00E-05 |
| 3 | GO:0033320: UDP-D-xylose biosynthetic process | 7.90E-05 |
| 4 | GO:0048827: phyllome development | 1.30E-04 |
| 5 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 1.30E-04 |
| 6 | GO:0043248: proteasome assembly | 1.30E-04 |
| 7 | GO:0042732: D-xylose metabolic process | 1.30E-04 |
| 8 | GO:0006491: N-glycan processing | 2.20E-04 |
| 9 | GO:0006379: mRNA cleavage | 2.85E-04 |
| 10 | GO:0006378: mRNA polyadenylation | 3.90E-04 |
| 11 | GO:0006790: sulfur compound metabolic process | 4.26E-04 |
| 12 | GO:0046854: phosphatidylinositol phosphorylation | 5.40E-04 |
| 13 | GO:0009225: nucleotide-sugar metabolic process | 5.40E-04 |
| 14 | GO:0000027: ribosomal large subunit assembly | 6.20E-04 |
| 15 | GO:0030163: protein catabolic process | 1.20E-03 |
| 16 | GO:0009817: defense response to fungus, incompatible interaction | 1.67E-03 |
| 17 | GO:0009846: pollen germination | 2.70E-03 |
| 18 | GO:0006486: protein glycosylation | 2.82E-03 |
| 19 | GO:0009553: embryo sac development | 3.51E-03 |
| 20 | GO:0010228: vegetative to reproductive phase transition of meristem | 5.37E-03 |
| 21 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 5.63E-03 |
| 22 | GO:0016192: vesicle-mediated transport | 8.47E-03 |
| 23 | GO:0006397: mRNA processing | 1.11E-02 |
| 24 | GO:0048364: root development | 1.11E-02 |
| 25 | GO:0008152: metabolic process | 1.15E-02 |
| 26 | GO:0009908: flower development | 1.50E-02 |
| 27 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.01E-02 |
| 28 | GO:0006979: response to oxidative stress | 2.68E-02 |
| 29 | GO:0015031: protein transport | 3.17E-02 |
| 30 | GO:0006810: transport | 3.51E-02 |
| 31 | GO:0005975: carbohydrate metabolic process | 3.59E-02 |
| 32 | GO:0046686: response to cadmium ion | 3.66E-02 |
| 33 | GO:0009793: embryo development ending in seed dormancy | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051731: polynucleotide 5'-hydroxyl-kinase activity | 2.00E-05 |
| 2 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 3.67E-05 |
| 3 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 5.65E-05 |
| 4 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.30E-04 |
| 5 | GO:0004559: alpha-mannosidase activity | 1.59E-04 |
| 6 | GO:0070403: NAD+ binding | 1.59E-04 |
| 7 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.59E-04 |
| 8 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.02E-04 |
| 9 | GO:0000166: nucleotide binding | 1.61E-02 |
| 10 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.96E-02 |
| 11 | GO:0005516: calmodulin binding | 2.16E-02 |
| 12 | GO:0005509: calcium ion binding | 2.52E-02 |
| 13 | GO:0003824: catalytic activity | 2.85E-02 |
| 14 | GO:0016491: oxidoreductase activity | 3.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005838: proteasome regulatory particle | 3.67E-05 |
| 2 | GO:0005849: mRNA cleavage factor complex | 5.65E-05 |
| 3 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.90E-04 |
| 4 | GO:0031307: integral component of mitochondrial outer membrane | 4.26E-04 |
| 5 | GO:0032580: Golgi cisterna membrane | 1.25E-03 |
| 6 | GO:0000502: proteasome complex | 2.82E-03 |
| 7 | GO:0005615: extracellular space | 5.63E-03 |
| 8 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 7.50E-03 |
| 9 | GO:0048046: apoplast | 1.05E-02 |
| 10 | GO:0005783: endoplasmic reticulum | 2.02E-02 |
| 11 | GO:0005802: trans-Golgi network | 2.26E-02 |
| 12 | GO:0005768: endosome | 2.47E-02 |
| 13 | GO:0005840: ribosome | 2.76E-02 |
| 14 | GO:0000139: Golgi membrane | 3.31E-02 |
| 15 | GO:0005730: nucleolus | 3.88E-02 |