GO Enrichment Analysis of Co-expressed Genes with
AT3G04730
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:0006098: pentose-phosphate shunt | 3.71E-05 |
| 3 | GO:0005980: glycogen catabolic process | 5.64E-05 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 6.52E-05 |
| 5 | GO:0006094: gluconeogenesis | 8.84E-05 |
| 6 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.30E-04 |
| 7 | GO:0006898: receptor-mediated endocytosis | 1.37E-04 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.41E-04 |
| 9 | GO:0019252: starch biosynthetic process | 3.49E-04 |
| 10 | GO:0071483: cellular response to blue light | 4.56E-04 |
| 11 | GO:0010021: amylopectin biosynthetic process | 4.56E-04 |
| 12 | GO:0006656: phosphatidylcholine biosynthetic process | 5.78E-04 |
| 13 | GO:0009904: chloroplast accumulation movement | 5.78E-04 |
| 14 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 7.07E-04 |
| 15 | GO:1902456: regulation of stomatal opening | 7.07E-04 |
| 16 | GO:0071333: cellular response to glucose stimulus | 8.44E-04 |
| 17 | GO:0009903: chloroplast avoidance movement | 8.44E-04 |
| 18 | GO:0010196: nonphotochemical quenching | 9.85E-04 |
| 19 | GO:0005978: glycogen biosynthetic process | 1.13E-03 |
| 20 | GO:0009642: response to light intensity | 1.13E-03 |
| 21 | GO:0070413: trehalose metabolism in response to stress | 1.13E-03 |
| 22 | GO:0015996: chlorophyll catabolic process | 1.29E-03 |
| 23 | GO:0032259: methylation | 1.40E-03 |
| 24 | GO:0005982: starch metabolic process | 1.62E-03 |
| 25 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.62E-03 |
| 26 | GO:0006096: glycolytic process | 1.73E-03 |
| 27 | GO:0009641: shade avoidance | 1.79E-03 |
| 28 | GO:0043085: positive regulation of catalytic activity | 1.97E-03 |
| 29 | GO:0018107: peptidyl-threonine phosphorylation | 2.36E-03 |
| 30 | GO:0009725: response to hormone | 2.36E-03 |
| 31 | GO:0009266: response to temperature stimulus | 2.56E-03 |
| 32 | GO:0010207: photosystem II assembly | 2.56E-03 |
| 33 | GO:0007015: actin filament organization | 2.56E-03 |
| 34 | GO:0010223: secondary shoot formation | 2.56E-03 |
| 35 | GO:0005992: trehalose biosynthetic process | 3.18E-03 |
| 36 | GO:0051260: protein homooligomerization | 3.63E-03 |
| 37 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.86E-03 |
| 38 | GO:0071215: cellular response to abscisic acid stimulus | 4.10E-03 |
| 39 | GO:0009741: response to brassinosteroid | 5.09E-03 |
| 40 | GO:0006662: glycerol ether metabolic process | 5.09E-03 |
| 41 | GO:0009630: gravitropism | 6.15E-03 |
| 42 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.01E-03 |
| 43 | GO:0001666: response to hypoxia | 7.59E-03 |
| 44 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 7.89E-03 |
| 45 | GO:0045454: cell redox homeostasis | 8.11E-03 |
| 46 | GO:0015995: chlorophyll biosynthetic process | 8.50E-03 |
| 47 | GO:0009813: flavonoid biosynthetic process | 9.45E-03 |
| 48 | GO:0034599: cellular response to oxidative stress | 1.11E-02 |
| 49 | GO:0009744: response to sucrose | 1.29E-02 |
| 50 | GO:0010114: response to red light | 1.29E-02 |
| 51 | GO:0046686: response to cadmium ion | 1.31E-02 |
| 52 | GO:0000209: protein polyubiquitination | 1.33E-02 |
| 53 | GO:0006364: rRNA processing | 1.59E-02 |
| 54 | GO:0006813: potassium ion transport | 1.59E-02 |
| 55 | GO:0055114: oxidation-reduction process | 1.59E-02 |
| 56 | GO:0010224: response to UV-B | 1.63E-02 |
| 57 | GO:0009626: plant-type hypersensitive response | 1.88E-02 |
| 58 | GO:0018105: peptidyl-serine phosphorylation | 2.09E-02 |
| 59 | GO:0006633: fatty acid biosynthetic process | 2.82E-02 |
| 60 | GO:0009739: response to gibberellin | 3.27E-02 |
| 61 | GO:0009617: response to bacterium | 3.42E-02 |
| 62 | GO:0042254: ribosome biogenesis | 4.17E-02 |
| 63 | GO:0009723: response to ethylene | 4.57E-02 |
| 64 | GO:0080167: response to karrikin | 4.80E-02 |
| 65 | GO:0016192: vesicle-mediated transport | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 2 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 3 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 4 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 5 | GO:0004332: fructose-bisphosphate aldolase activity | 8.76E-06 |
| 6 | GO:0045486: naringenin 3-dioxygenase activity | 5.64E-05 |
| 7 | GO:0035671: enone reductase activity | 5.64E-05 |
| 8 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 5.64E-05 |
| 9 | GO:0008184: glycogen phosphorylase activity | 5.64E-05 |
| 10 | GO:0004645: phosphorylase activity | 5.64E-05 |
| 11 | GO:0034256: chlorophyll(ide) b reductase activity | 5.64E-05 |
| 12 | GO:0042389: omega-3 fatty acid desaturase activity | 1.37E-04 |
| 13 | GO:0018708: thiol S-methyltransferase activity | 1.37E-04 |
| 14 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.37E-04 |
| 15 | GO:0019172: glyoxalase III activity | 1.37E-04 |
| 16 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.37E-04 |
| 17 | GO:0043169: cation binding | 2.34E-04 |
| 18 | GO:0004373: glycogen (starch) synthase activity | 2.34E-04 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.56E-04 |
| 20 | GO:0009011: starch synthase activity | 4.56E-04 |
| 21 | GO:0004462: lactoylglutathione lyase activity | 7.07E-04 |
| 22 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.29E-03 |
| 23 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.62E-03 |
| 24 | GO:0008047: enzyme activator activity | 1.79E-03 |
| 25 | GO:0031072: heat shock protein binding | 2.36E-03 |
| 26 | GO:0031418: L-ascorbic acid binding | 3.18E-03 |
| 27 | GO:0047134: protein-disulfide reductase activity | 4.58E-03 |
| 28 | GO:0005249: voltage-gated potassium channel activity | 4.83E-03 |
| 29 | GO:0008168: methyltransferase activity | 5.27E-03 |
| 30 | GO:0004791: thioredoxin-disulfide reductase activity | 5.35E-03 |
| 31 | GO:0004872: receptor activity | 5.61E-03 |
| 32 | GO:0048038: quinone binding | 5.88E-03 |
| 33 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.43E-03 |
| 34 | GO:0016791: phosphatase activity | 6.71E-03 |
| 35 | GO:0003746: translation elongation factor activity | 1.08E-02 |
| 36 | GO:0031625: ubiquitin protein ligase binding | 1.71E-02 |
| 37 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 38 | GO:0015035: protein disulfide oxidoreductase activity | 2.09E-02 |
| 39 | GO:0030170: pyridoxal phosphate binding | 2.58E-02 |
| 40 | GO:0003743: translation initiation factor activity | 3.37E-02 |
| 41 | GO:0016757: transferase activity, transferring glycosyl groups | 3.49E-02 |
| 42 | GO:0042802: identical protein binding | 3.58E-02 |
| 43 | GO:0046982: protein heterodimerization activity | 4.06E-02 |
| 44 | GO:0016491: oxidoreductase activity | 4.73E-02 |
| 45 | GO:0061630: ubiquitin protein ligase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.06E-11 |
| 2 | GO:0009534: chloroplast thylakoid | 2.45E-08 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.71E-05 |
| 4 | GO:0009570: chloroplast stroma | 1.31E-04 |
| 5 | GO:0009569: chloroplast starch grain | 1.37E-04 |
| 6 | GO:0042651: thylakoid membrane | 1.63E-04 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 2.38E-04 |
| 8 | GO:0009941: chloroplast envelope | 2.62E-04 |
| 9 | GO:0008076: voltage-gated potassium channel complex | 3.41E-04 |
| 10 | GO:0009579: thylakoid | 6.63E-04 |
| 11 | GO:0031969: chloroplast membrane | 9.16E-04 |
| 12 | GO:0031977: thylakoid lumen | 1.02E-03 |
| 13 | GO:0009501: amyloplast | 1.13E-03 |
| 14 | GO:0031982: vesicle | 1.13E-03 |
| 15 | GO:0010287: plastoglobule | 2.45E-03 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 2.58E-03 |
| 17 | GO:0005623: cell | 2.65E-03 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 3.40E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 5.61E-03 |
| 20 | GO:0010319: stromule | 7.00E-03 |
| 21 | GO:0048046: apoplast | 3.79E-02 |