Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G04640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046109: uridine biosynthetic process0.00E+00
2GO:0032497: detection of lipopolysaccharide0.00E+00
3GO:0072660: maintenance of protein location in plasma membrane0.00E+00
4GO:0070212: protein poly-ADP-ribosylation0.00E+00
5GO:0010200: response to chitin1.73E-05
6GO:0051245: negative regulation of cellular defense response7.39E-05
7GO:0046373: L-arabinose metabolic process1.77E-04
8GO:0080167: response to karrikin1.93E-04
9GO:0006952: defense response2.33E-04
10GO:0031348: negative regulation of defense response2.87E-04
11GO:0072661: protein targeting to plasma membrane2.99E-04
12GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity2.99E-04
13GO:0010581: regulation of starch biosynthetic process2.99E-04
14GO:0009052: pentose-phosphate shunt, non-oxidative branch4.32E-04
15GO:0006612: protein targeting to membrane4.32E-04
16GO:0015696: ammonium transport4.32E-04
17GO:0010148: transpiration4.32E-04
18GO:0006308: DNA catabolic process5.75E-04
19GO:0072488: ammonium transmembrane transport5.75E-04
20GO:0010363: regulation of plant-type hypersensitive response5.75E-04
21GO:0006014: D-ribose metabolic process8.91E-04
22GO:0050832: defense response to fungus9.02E-04
23GO:0008219: cell death9.73E-04
24GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.06E-03
25GO:1900056: negative regulation of leaf senescence1.24E-03
26GO:0000209: protein polyubiquitination1.62E-03
27GO:2000031: regulation of salicylic acid mediated signaling pathway1.63E-03
28GO:0071482: cellular response to light stimulus1.63E-03
29GO:0006468: protein phosphorylation1.82E-03
30GO:0051865: protein autoubiquitination1.83E-03
31GO:0090305: nucleic acid phosphodiester bond hydrolysis1.83E-03
32GO:0010112: regulation of systemic acquired resistance1.83E-03
33GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.88E-03
34GO:2000280: regulation of root development2.05E-03
35GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway2.05E-03
36GO:0055062: phosphate ion homeostasis2.28E-03
37GO:0009870: defense response signaling pathway, resistance gene-dependent2.28E-03
38GO:0006032: chitin catabolic process2.28E-03
39GO:0043069: negative regulation of programmed cell death2.28E-03
40GO:0000272: polysaccharide catabolic process2.51E-03
41GO:0009682: induced systemic resistance2.51E-03
42GO:0042742: defense response to bacterium2.52E-03
43GO:0009626: plant-type hypersensitive response2.61E-03
44GO:0010053: root epidermal cell differentiation3.51E-03
45GO:0042343: indole glucosinolate metabolic process3.51E-03
46GO:0009863: salicylic acid mediated signaling pathway4.06E-03
47GO:0030150: protein import into mitochondrial matrix4.06E-03
48GO:0009738: abscisic acid-activated signaling pathway4.62E-03
49GO:0016998: cell wall macromolecule catabolic process4.63E-03
50GO:0098542: defense response to other organism4.63E-03
51GO:0048278: vesicle docking4.63E-03
52GO:2000022: regulation of jasmonic acid mediated signaling pathway4.93E-03
53GO:0001944: vasculature development5.23E-03
54GO:0009625: response to insect5.23E-03
55GO:0071215: cellular response to abscisic acid stimulus5.23E-03
56GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process5.66E-03
57GO:0007166: cell surface receptor signaling pathway5.78E-03
58GO:0042631: cellular response to water deprivation6.18E-03
59GO:0048544: recognition of pollen6.84E-03
60GO:0061025: membrane fusion6.84E-03
61GO:0019252: starch biosynthetic process7.19E-03
62GO:0010193: response to ozone7.53E-03
63GO:0002229: defense response to oomycetes7.53E-03
64GO:0001666: response to hypoxia9.74E-03
65GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.01E-02
66GO:0009816: defense response to bacterium, incompatible interaction1.01E-02
67GO:0009627: systemic acquired resistance1.05E-02
68GO:0006906: vesicle fusion1.05E-02
69GO:0048573: photoperiodism, flowering1.09E-02
70GO:0016049: cell growth1.13E-02
71GO:0030244: cellulose biosynthetic process1.17E-02
72GO:0006499: N-terminal protein myristoylation1.26E-02
73GO:0010119: regulation of stomatal movement1.30E-02
74GO:0000724: double-strand break repair via homologous recombination1.34E-02
75GO:0016567: protein ubiquitination1.36E-02
76GO:0009867: jasmonic acid mediated signaling pathway1.39E-02
77GO:0045087: innate immune response1.39E-02
78GO:0016051: carbohydrate biosynthetic process1.39E-02
79GO:0030001: metal ion transport1.52E-02
80GO:0006887: exocytosis1.57E-02
81GO:0008152: metabolic process1.58E-02
82GO:0051707: response to other organism1.66E-02
83GO:0006855: drug transmembrane transport1.85E-02
84GO:0031347: regulation of defense response1.90E-02
85GO:0042538: hyperosmotic salinity response1.95E-02
86GO:0009620: response to fungus2.47E-02
87GO:0009624: response to nematode2.64E-02
88GO:0009742: brassinosteroid mediated signaling pathway2.75E-02
89GO:0016310: phosphorylation3.64E-02
90GO:0006633: fatty acid biosynthetic process3.64E-02
91GO:0009617: response to bacterium4.41E-02
RankGO TermAdjusted P value
1GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity7.39E-05
2GO:0080042: ADP-glucose pyrophosphohydrolase activity7.39E-05
3GO:0016301: kinase activity1.11E-04
4GO:0001047: core promoter binding1.77E-04
5GO:0080041: ADP-ribose pyrophosphohydrolase activity1.77E-04
6GO:0017110: nucleoside-diphosphatase activity1.77E-04
7GO:0004751: ribose-5-phosphate isomerase activity2.99E-04
8GO:0031176: endo-1,4-beta-xylanase activity4.32E-04
9GO:0046556: alpha-L-arabinofuranosidase activity5.75E-04
10GO:0043495: protein anchor5.75E-04
11GO:0004674: protein serine/threonine kinase activity6.81E-04
12GO:0047631: ADP-ribose diphosphatase activity7.29E-04
13GO:0000210: NAD+ diphosphatase activity8.91E-04
14GO:0008519: ammonium transmembrane transporter activity8.91E-04
15GO:0004672: protein kinase activity1.02E-03
16GO:0004747: ribokinase activity1.06E-03
17GO:0043531: ADP binding1.23E-03
18GO:0102425: myricetin 3-O-glucosyltransferase activity1.24E-03
19GO:0102360: daphnetin 3-O-glucosyltransferase activity1.24E-03
20GO:0008865: fructokinase activity1.43E-03
21GO:0047893: flavonol 3-O-glucosyltransferase activity1.43E-03
22GO:0004714: transmembrane receptor protein tyrosine kinase activity1.43E-03
23GO:0004568: chitinase activity2.28E-03
24GO:0004713: protein tyrosine kinase activity2.28E-03
25GO:0015266: protein channel activity3.00E-03
26GO:0008061: chitin binding3.51E-03
27GO:0033612: receptor serine/threonine kinase binding4.63E-03
28GO:0035251: UDP-glucosyltransferase activity4.63E-03
29GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.72E-03
30GO:0008270: zinc ion binding9.06E-03
31GO:0061630: ubiquitin protein ligase activity1.02E-02
32GO:0008375: acetylglucosaminyltransferase activity1.05E-02
33GO:0030247: polysaccharide binding1.09E-02
34GO:0016798: hydrolase activity, acting on glycosyl bonds1.09E-02
35GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.17E-02
36GO:0015238: drug transmembrane transporter activity1.22E-02
37GO:0000149: SNARE binding1.48E-02
38GO:0004712: protein serine/threonine/tyrosine kinase activity1.48E-02
39GO:0016757: transferase activity, transferring glycosyl groups1.61E-02
40GO:0005484: SNAP receptor activity1.66E-02
41GO:0051287: NAD binding1.90E-02
42GO:0031625: ubiquitin protein ligase binding2.21E-02
43GO:0080043: quercetin 3-O-glucosyltransferase activity2.47E-02
44GO:0080044: quercetin 7-O-glucosyltransferase activity2.47E-02
45GO:0005524: ATP binding3.02E-02
46GO:0016758: transferase activity, transferring hexosyl groups3.04E-02
47GO:0015297: antiporter activity3.77E-02
48GO:0008194: UDP-glycosyltransferase activity4.22E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane7.49E-04
2GO:0031305: integral component of mitochondrial inner membrane1.43E-03
3GO:0005886: plasma membrane2.19E-03
4GO:0005578: proteinaceous extracellular matrix3.00E-03
5GO:0043234: protein complex3.78E-03
6GO:0005744: mitochondrial inner membrane presequence translocase complex5.54E-03
7GO:0009504: cell plate7.19E-03
8GO:0031201: SNARE complex1.57E-02
9GO:0090406: pollen tube1.66E-02
10GO:0010008: endosome membrane2.37E-02
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Gene type



Gene DE type