GO Enrichment Analysis of Co-expressed Genes with
AT3G04060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 2 | GO:0007275: multicellular organism development | 1.56E-05 |
| 3 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 5.03E-05 |
| 4 | GO:1990022: RNA polymerase III complex localization to nucleus | 5.03E-05 |
| 5 | GO:0044376: RNA polymerase II complex import to nucleus | 5.03E-05 |
| 6 | GO:0000077: DNA damage checkpoint | 5.03E-05 |
| 7 | GO:0042350: GDP-L-fucose biosynthetic process | 5.03E-05 |
| 8 | GO:1990641: response to iron ion starvation | 5.03E-05 |
| 9 | GO:0040020: regulation of meiotic nuclear division | 1.23E-04 |
| 10 | GO:0009812: flavonoid metabolic process | 1.23E-04 |
| 11 | GO:0006101: citrate metabolic process | 1.23E-04 |
| 12 | GO:0006597: spermine biosynthetic process | 1.23E-04 |
| 13 | GO:0042853: L-alanine catabolic process | 1.23E-04 |
| 14 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 2.11E-04 |
| 15 | GO:0009226: nucleotide-sugar biosynthetic process | 3.09E-04 |
| 16 | GO:0051639: actin filament network formation | 3.09E-04 |
| 17 | GO:0051764: actin crosslink formation | 4.15E-04 |
| 18 | GO:0006097: glyoxylate cycle | 5.26E-04 |
| 19 | GO:0006596: polyamine biosynthetic process | 6.44E-04 |
| 20 | GO:0010044: response to aluminum ion | 8.97E-04 |
| 21 | GO:0006102: isocitrate metabolic process | 1.03E-03 |
| 22 | GO:0007155: cell adhesion | 1.03E-03 |
| 23 | GO:0010332: response to gamma radiation | 1.32E-03 |
| 24 | GO:0009835: fruit ripening | 1.32E-03 |
| 25 | GO:0000103: sulfate assimilation | 1.63E-03 |
| 26 | GO:0016441: posttranscriptional gene silencing | 1.63E-03 |
| 27 | GO:0030036: actin cytoskeleton organization | 2.14E-03 |
| 28 | GO:0034605: cellular response to heat | 2.32E-03 |
| 29 | GO:0009738: abscisic acid-activated signaling pathway | 2.43E-03 |
| 30 | GO:0009825: multidimensional cell growth | 2.50E-03 |
| 31 | GO:0009901: anther dehiscence | 2.50E-03 |
| 32 | GO:0070588: calcium ion transmembrane transport | 2.50E-03 |
| 33 | GO:0034976: response to endoplasmic reticulum stress | 2.69E-03 |
| 34 | GO:0000162: tryptophan biosynthetic process | 2.69E-03 |
| 35 | GO:0030150: protein import into mitochondrial matrix | 2.88E-03 |
| 36 | GO:0051017: actin filament bundle assembly | 2.88E-03 |
| 37 | GO:0045893: positive regulation of transcription, DNA-templated | 3.01E-03 |
| 38 | GO:0006457: protein folding | 3.51E-03 |
| 39 | GO:0009411: response to UV | 3.71E-03 |
| 40 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.73E-03 |
| 41 | GO:0006662: glycerol ether metabolic process | 4.60E-03 |
| 42 | GO:0010197: polar nucleus fusion | 4.60E-03 |
| 43 | GO:0006623: protein targeting to vacuole | 5.07E-03 |
| 44 | GO:0006891: intra-Golgi vesicle-mediated transport | 5.32E-03 |
| 45 | GO:0016032: viral process | 5.56E-03 |
| 46 | GO:0001666: response to hypoxia | 6.85E-03 |
| 47 | GO:0009816: defense response to bacterium, incompatible interaction | 7.12E-03 |
| 48 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 7.12E-03 |
| 49 | GO:0048767: root hair elongation | 8.53E-03 |
| 50 | GO:0006629: lipid metabolic process | 8.64E-03 |
| 51 | GO:0006499: N-terminal protein myristoylation | 8.82E-03 |
| 52 | GO:0034599: cellular response to oxidative stress | 1.00E-02 |
| 53 | GO:0006099: tricarboxylic acid cycle | 1.00E-02 |
| 54 | GO:0006631: fatty acid metabolic process | 1.10E-02 |
| 55 | GO:0010114: response to red light | 1.16E-02 |
| 56 | GO:0051707: response to other organism | 1.16E-02 |
| 57 | GO:0000209: protein polyubiquitination | 1.20E-02 |
| 58 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.33E-02 |
| 59 | GO:0009846: pollen germination | 1.37E-02 |
| 60 | GO:0042538: hyperosmotic salinity response | 1.37E-02 |
| 61 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.47E-02 |
| 62 | GO:0010224: response to UV-B | 1.47E-02 |
| 63 | GO:0006857: oligopeptide transport | 1.51E-02 |
| 64 | GO:0009555: pollen development | 1.54E-02 |
| 65 | GO:0006096: glycolytic process | 1.62E-02 |
| 66 | GO:0055085: transmembrane transport | 1.95E-02 |
| 67 | GO:0009058: biosynthetic process | 2.24E-02 |
| 68 | GO:0009790: embryo development | 2.41E-02 |
| 69 | GO:0010150: leaf senescence | 2.72E-02 |
| 70 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.81E-02 |
| 71 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.95E-02 |
| 72 | GO:0006470: protein dephosphorylation | 2.99E-02 |
| 73 | GO:0042742: defense response to bacterium | 3.12E-02 |
| 74 | GO:0006979: response to oxidative stress | 3.14E-02 |
| 75 | GO:0009860: pollen tube growth | 3.91E-02 |
| 76 | GO:0006351: transcription, DNA-templated | 3.99E-02 |
| 77 | GO:0016192: vesicle-mediated transport | 4.48E-02 |
| 78 | GO:0046686: response to cadmium ion | 4.83E-02 |
| 79 | GO:0045454: cell redox homeostasis | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 2 | GO:0061133: endopeptidase activator activity | 0.00E+00 |
| 3 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 4 | GO:0016768: spermine synthase activity | 5.03E-05 |
| 5 | GO:0050577: GDP-L-fucose synthase activity | 5.03E-05 |
| 6 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.23E-04 |
| 7 | GO:0003994: aconitate hydratase activity | 1.23E-04 |
| 8 | GO:0004766: spermidine synthase activity | 1.23E-04 |
| 9 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 3.09E-04 |
| 10 | GO:0070628: proteasome binding | 4.15E-04 |
| 11 | GO:0004834: tryptophan synthase activity | 4.15E-04 |
| 12 | GO:0004623: phospholipase A2 activity | 5.26E-04 |
| 13 | GO:0004806: triglyceride lipase activity | 5.46E-04 |
| 14 | GO:0047714: galactolipase activity | 6.44E-04 |
| 15 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.03E-03 |
| 16 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 1.17E-03 |
| 17 | GO:0030955: potassium ion binding | 1.47E-03 |
| 18 | GO:0004743: pyruvate kinase activity | 1.47E-03 |
| 19 | GO:0030234: enzyme regulator activity | 1.63E-03 |
| 20 | GO:0015198: oligopeptide transporter activity | 1.96E-03 |
| 21 | GO:0005388: calcium-transporting ATPase activity | 2.14E-03 |
| 22 | GO:0004175: endopeptidase activity | 2.32E-03 |
| 23 | GO:0030170: pyridoxal phosphate binding | 2.48E-03 |
| 24 | GO:0043130: ubiquitin binding | 2.88E-03 |
| 25 | GO:0051087: chaperone binding | 3.08E-03 |
| 26 | GO:0004298: threonine-type endopeptidase activity | 3.29E-03 |
| 27 | GO:0005507: copper ion binding | 3.95E-03 |
| 28 | GO:0047134: protein-disulfide reductase activity | 4.15E-03 |
| 29 | GO:0005102: receptor binding | 4.15E-03 |
| 30 | GO:0050662: coenzyme binding | 4.83E-03 |
| 31 | GO:0004791: thioredoxin-disulfide reductase activity | 4.83E-03 |
| 32 | GO:0016853: isomerase activity | 4.83E-03 |
| 33 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.81E-03 |
| 34 | GO:0051015: actin filament binding | 5.81E-03 |
| 35 | GO:0042803: protein homodimerization activity | 7.34E-03 |
| 36 | GO:0004222: metalloendopeptidase activity | 8.82E-03 |
| 37 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.07E-02 |
| 38 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.58E-02 |
| 39 | GO:0022857: transmembrane transporter activity | 1.77E-02 |
| 40 | GO:0005524: ATP binding | 1.79E-02 |
| 41 | GO:0051082: unfolded protein binding | 1.84E-02 |
| 42 | GO:0015035: protein disulfide oxidoreductase activity | 1.88E-02 |
| 43 | GO:0008565: protein transporter activity | 2.46E-02 |
| 44 | GO:0015297: antiporter activity | 2.63E-02 |
| 45 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.23E-02 |
| 46 | GO:0000287: magnesium ion binding | 3.66E-02 |
| 47 | GO:0004842: ubiquitin-protein transferase activity | 4.30E-02 |
| 48 | GO:0061630: ubiquitin protein ligase activity | 4.48E-02 |
| 49 | GO:0043565: sequence-specific DNA binding | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001405: presequence translocase-associated import motor | 5.03E-05 |
| 2 | GO:0032432: actin filament bundle | 3.09E-04 |
| 3 | GO:0016272: prefoldin complex | 7.68E-04 |
| 4 | GO:0031902: late endosome membrane | 8.91E-04 |
| 5 | GO:0000502: proteasome complex | 1.28E-03 |
| 6 | GO:0030665: clathrin-coated vesicle membrane | 1.47E-03 |
| 7 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.47E-03 |
| 8 | GO:0017119: Golgi transport complex | 1.63E-03 |
| 9 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.79E-03 |
| 10 | GO:0005884: actin filament | 1.79E-03 |
| 11 | GO:0005774: vacuolar membrane | 1.85E-03 |
| 12 | GO:0005795: Golgi stack | 2.50E-03 |
| 13 | GO:0005839: proteasome core complex | 3.29E-03 |
| 14 | GO:0016592: mediator complex | 5.56E-03 |
| 15 | GO:0005788: endoplasmic reticulum lumen | 7.12E-03 |
| 16 | GO:0005829: cytosol | 7.52E-03 |
| 17 | GO:0000139: Golgi membrane | 9.08E-03 |
| 18 | GO:0000325: plant-type vacuole | 9.12E-03 |
| 19 | GO:0005789: endoplasmic reticulum membrane | 1.06E-02 |
| 20 | GO:0005887: integral component of plasma membrane | 1.17E-02 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 2.16E-02 |
| 22 | GO:0005783: endoplasmic reticulum | 2.19E-02 |
| 23 | GO:0005759: mitochondrial matrix | 2.54E-02 |
| 24 | GO:0005615: extracellular space | 2.95E-02 |
| 25 | GO:0005874: microtubule | 4.22E-02 |