Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G03610

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
2GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
3GO:0009312: oligosaccharide biosynthetic process0.00E+00
4GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
5GO:0046865: terpenoid transport0.00E+00
6GO:0010324: membrane invagination0.00E+00
7GO:0010055: atrichoblast differentiation0.00E+00
8GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
9GO:1902001: fatty acid transmembrane transport0.00E+00
10GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
11GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
12GO:0009751: response to salicylic acid2.63E-05
13GO:0071456: cellular response to hypoxia4.05E-05
14GO:0033358: UDP-L-arabinose biosynthetic process1.49E-04
15GO:0045227: capsule polysaccharide biosynthetic process1.49E-04
16GO:0009737: response to abscisic acid1.96E-04
17GO:0002237: response to molecule of bacterial origin2.20E-04
18GO:0010200: response to chitin2.65E-04
19GO:0009643: photosynthetic acclimation3.22E-04
20GO:0031930: mitochondria-nucleus signaling pathway4.29E-04
21GO:0042742: defense response to bacterium4.36E-04
22GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.23E-04
23GO:0033306: phytol metabolic process5.23E-04
24GO:0050691: regulation of defense response to virus by host5.23E-04
25GO:0032491: detection of molecule of fungal origin5.23E-04
26GO:0009968: negative regulation of signal transduction5.23E-04
27GO:1990542: mitochondrial transmembrane transport5.23E-04
28GO:0032107: regulation of response to nutrient levels5.23E-04
29GO:0015760: glucose-6-phosphate transport5.23E-04
30GO:0046256: 2,4,6-trinitrotoluene catabolic process5.23E-04
31GO:0043547: positive regulation of GTPase activity5.23E-04
32GO:1990641: response to iron ion starvation5.23E-04
33GO:0019567: arabinose biosynthetic process5.23E-04
34GO:0015969: guanosine tetraphosphate metabolic process5.23E-04
35GO:0010208: pollen wall assembly8.35E-04
36GO:0051707: response to other organism8.35E-04
37GO:0010112: regulation of systemic acquired resistance9.97E-04
38GO:0009749: response to glucose1.01E-03
39GO:0010115: regulation of abscisic acid biosynthetic process1.13E-03
40GO:0006101: citrate metabolic process1.13E-03
41GO:0015908: fatty acid transport1.13E-03
42GO:0015865: purine nucleotide transport1.13E-03
43GO:0002240: response to molecule of oomycetes origin1.13E-03
44GO:0044419: interspecies interaction between organisms1.13E-03
45GO:0010271: regulation of chlorophyll catabolic process1.13E-03
46GO:0015712: hexose phosphate transport1.13E-03
47GO:0019725: cellular homeostasis1.13E-03
48GO:0051258: protein polymerization1.13E-03
49GO:0015012: heparan sulfate proteoglycan biosynthetic process1.13E-03
50GO:0071668: plant-type cell wall assembly1.13E-03
51GO:0080183: response to photooxidative stress1.13E-03
52GO:0010155: regulation of proton transport1.13E-03
53GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.13E-03
54GO:0080181: lateral root branching1.13E-03
55GO:0006024: glycosaminoglycan biosynthetic process1.13E-03
56GO:0055088: lipid homeostasis1.13E-03
57GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.17E-03
58GO:0006032: chitin catabolic process1.37E-03
59GO:0006904: vesicle docking involved in exocytosis1.52E-03
60GO:0015714: phosphoenolpyruvate transport1.84E-03
61GO:0080168: abscisic acid transport1.84E-03
62GO:0006954: inflammatory response1.84E-03
63GO:0010498: proteasomal protein catabolic process1.84E-03
64GO:0034051: negative regulation of plant-type hypersensitive response1.84E-03
65GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.84E-03
66GO:0080163: regulation of protein serine/threonine phosphatase activity1.84E-03
67GO:0035436: triose phosphate transmembrane transport1.84E-03
68GO:0045836: positive regulation of meiotic nuclear division1.84E-03
69GO:0006065: UDP-glucuronate biosynthetic process1.84E-03
70GO:0015783: GDP-fucose transport1.84E-03
71GO:0015692: lead ion transport1.84E-03
72GO:0052546: cell wall pectin metabolic process1.84E-03
73GO:0015695: organic cation transport1.84E-03
74GO:0009266: response to temperature stimulus2.33E-03
75GO:0009225: nucleotide-sugar metabolic process2.61E-03
76GO:0046902: regulation of mitochondrial membrane permeability2.67E-03
77GO:0072583: clathrin-dependent endocytosis2.67E-03
78GO:0010731: protein glutathionylation2.67E-03
79GO:0015696: ammonium transport2.67E-03
80GO:0071323: cellular response to chitin2.67E-03
81GO:0010116: positive regulation of abscisic acid biosynthetic process2.67E-03
82GO:0006499: N-terminal protein myristoylation2.81E-03
83GO:0009863: salicylic acid mediated signaling pathway3.23E-03
84GO:0080147: root hair cell development3.23E-03
85GO:0009867: jasmonic acid mediated signaling pathway3.36E-03
86GO:0072488: ammonium transmembrane transport3.60E-03
87GO:0015713: phosphoglycerate transport3.60E-03
88GO:0010109: regulation of photosynthesis3.60E-03
89GO:0060548: negative regulation of cell death3.60E-03
90GO:0016998: cell wall macromolecule catabolic process3.93E-03
91GO:0006887: exocytosis4.20E-03
92GO:0006897: endocytosis4.20E-03
93GO:0031348: negative regulation of defense response4.30E-03
94GO:0009247: glycolipid biosynthetic process4.62E-03
95GO:0045927: positive regulation of growth4.62E-03
96GO:0034052: positive regulation of plant-type hypersensitive response4.62E-03
97GO:0030041: actin filament polymerization4.62E-03
98GO:0006097: glyoxylate cycle4.62E-03
99GO:0009229: thiamine diphosphate biosynthetic process4.62E-03
100GO:0018344: protein geranylgeranylation4.62E-03
101GO:0006012: galactose metabolic process4.70E-03
102GO:0009306: protein secretion5.11E-03
103GO:0010150: leaf senescence5.20E-03
104GO:0033365: protein localization to organelle5.73E-03
105GO:0010337: regulation of salicylic acid metabolic process5.73E-03
106GO:0009228: thiamine biosynthetic process5.73E-03
107GO:0002238: response to molecule of fungal origin5.73E-03
108GO:0009759: indole glucosinolate biosynthetic process5.73E-03
109GO:0048317: seed morphogenesis5.73E-03
110GO:0015031: protein transport6.36E-03
111GO:0007166: cell surface receptor signaling pathway6.39E-03
112GO:0045926: negative regulation of growth6.91E-03
113GO:0071470: cellular response to osmotic stress6.91E-03
114GO:0010193: response to ozone8.00E-03
115GO:1900057: positive regulation of leaf senescence8.18E-03
116GO:0000122: negative regulation of transcription from RNA polymerase II promoter8.18E-03
117GO:1902074: response to salt8.18E-03
118GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.18E-03
119GO:0046470: phosphatidylcholine metabolic process8.18E-03
120GO:1900056: negative regulation of leaf senescence8.18E-03
121GO:0009753: response to jasmonic acid8.55E-03
122GO:0007264: small GTPase mediated signal transduction8.55E-03
123GO:0010928: regulation of auxin mediated signaling pathway9.53E-03
124GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline9.53E-03
125GO:0009819: drought recovery9.53E-03
126GO:0043068: positive regulation of programmed cell death9.53E-03
127GO:0019375: galactolipid biosynthetic process9.53E-03
128GO:0045010: actin nucleation9.53E-03
129GO:0031540: regulation of anthocyanin biosynthetic process9.53E-03
130GO:0006102: isocitrate metabolic process9.53E-03
131GO:0006952: defense response1.05E-02
132GO:0009624: response to nematode1.07E-02
133GO:0010120: camalexin biosynthetic process1.10E-02
134GO:0010204: defense response signaling pathway, resistance gene-independent1.10E-02
135GO:0010029: regulation of seed germination1.23E-02
136GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.23E-02
137GO:0019432: triglyceride biosynthetic process1.24E-02
138GO:0015780: nucleotide-sugar transport1.24E-02
139GO:0007338: single fertilization1.24E-02
140GO:0006468: protein phosphorylation1.39E-02
141GO:0009086: methionine biosynthetic process1.40E-02
142GO:0048268: clathrin coat assembly1.40E-02
143GO:0010380: regulation of chlorophyll biosynthetic process1.40E-02
144GO:0008202: steroid metabolic process1.40E-02
145GO:1900426: positive regulation of defense response to bacterium1.40E-02
146GO:0051555: flavonol biosynthetic process1.56E-02
147GO:0009407: toxin catabolic process1.68E-02
148GO:0019684: photosynthesis, light reaction1.73E-02
149GO:0009089: lysine biosynthetic process via diaminopimelate1.73E-02
150GO:0009682: induced systemic resistance1.73E-02
151GO:0009684: indoleacetic acid biosynthetic process1.73E-02
152GO:0045037: protein import into chloroplast stroma1.91E-02
153GO:0000266: mitochondrial fission1.91E-02
154GO:0050832: defense response to fungus1.99E-02
155GO:0006626: protein targeting to mitochondrion2.09E-02
156GO:2000028: regulation of photoperiodism, flowering2.09E-02
157GO:0018107: peptidyl-threonine phosphorylation2.09E-02
158GO:0055046: microgametogenesis2.09E-02
159GO:0006829: zinc II ion transport2.09E-02
160GO:0009611: response to wounding2.12E-02
161GO:0034605: cellular response to heat2.28E-02
162GO:0007034: vacuolar transport2.28E-02
163GO:0010167: response to nitrate2.47E-02
164GO:0009901: anther dehiscence2.47E-02
165GO:0046688: response to copper ion2.47E-02
166GO:0070588: calcium ion transmembrane transport2.47E-02
167GO:0009414: response to water deprivation2.51E-02
168GO:0006470: protein dephosphorylation2.54E-02
169GO:0000209: protein polyubiquitination2.60E-02
170GO:0000162: tryptophan biosynthetic process2.67E-02
171GO:0009636: response to toxic substance2.81E-02
172GO:0045333: cellular respiration2.88E-02
173GO:0006289: nucleotide-excision repair2.88E-02
174GO:2000377: regulation of reactive oxygen species metabolic process2.88E-02
175GO:0031347: regulation of defense response3.02E-02
176GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.02E-02
177GO:0055085: transmembrane transport3.05E-02
178GO:0006825: copper ion transport3.09E-02
179GO:0006812: cation transport3.13E-02
180GO:0042538: hyperosmotic salinity response3.13E-02
181GO:0051321: meiotic cell cycle3.30E-02
182GO:0006334: nucleosome assembly3.30E-02
183GO:0006486: protein glycosylation3.36E-02
184GO:0009814: defense response, incompatible interaction3.52E-02
185GO:0010017: red or far-red light signaling pathway3.52E-02
186GO:0009625: response to insect3.75E-02
187GO:0042127: regulation of cell proliferation3.97E-02
188GO:0009561: megagametogenesis3.97E-02
189GO:0010584: pollen exine formation3.97E-02
190GO:0009723: response to ethylene4.43E-02
191GO:0042391: regulation of membrane potential4.45E-02
192GO:0000271: polysaccharide biosynthetic process4.45E-02
193GO:0009960: endosperm development4.69E-02
194GO:0045489: pectin biosynthetic process4.69E-02
195GO:0006885: regulation of pH4.69E-02
196GO:0010182: sugar mediated signaling pathway4.69E-02
197GO:0080167: response to karrikin4.82E-02
198GO:0018105: peptidyl-serine phosphorylation4.91E-02
RankGO TermAdjusted P value
1GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
2GO:0050334: thiaminase activity0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
5GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
6GO:0004568: chitinase activity9.96E-05
7GO:0050373: UDP-arabinose 4-epimerase activity1.49E-04
8GO:0005509: calcium ion binding3.43E-04
9GO:0003978: UDP-glucose 4-epimerase activity4.29E-04
10GO:0047150: betaine-homocysteine S-methyltransferase activity5.23E-04
11GO:0046481: digalactosyldiacylglycerol synthase activity5.23E-04
12GO:0015245: fatty acid transporter activity5.23E-04
13GO:0010285: L,L-diaminopimelate aminotransferase activity5.23E-04
14GO:0032050: clathrin heavy chain binding5.23E-04
15GO:0004662: CAAX-protein geranylgeranyltransferase activity5.23E-04
16GO:0043565: sequence-specific DNA binding7.53E-04
17GO:0016301: kinase activity1.04E-03
18GO:0032934: sterol binding1.13E-03
19GO:0015036: disulfide oxidoreductase activity1.13E-03
20GO:0048531: beta-1,3-galactosyltransferase activity1.13E-03
21GO:0008728: GTP diphosphokinase activity1.13E-03
22GO:0047364: desulfoglucosinolate sulfotransferase activity1.13E-03
23GO:0003994: aconitate hydratase activity1.13E-03
24GO:0015152: glucose-6-phosphate transmembrane transporter activity1.13E-03
25GO:0008559: xenobiotic-transporting ATPase activity1.58E-03
26GO:0032403: protein complex binding1.84E-03
27GO:0071917: triose-phosphate transmembrane transporter activity1.84E-03
28GO:0005457: GDP-fucose transmembrane transporter activity1.84E-03
29GO:0003979: UDP-glucose 6-dehydrogenase activity1.84E-03
30GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.84E-03
31GO:0004324: ferredoxin-NADP+ reductase activity1.84E-03
32GO:0016531: copper chaperone activity1.84E-03
33GO:0008375: acetylglucosaminyltransferase activity2.03E-03
34GO:0035529: NADH pyrophosphatase activity2.67E-03
35GO:0035250: UDP-galactosyltransferase activity2.67E-03
36GO:0017077: oxidative phosphorylation uncoupler activity2.67E-03
37GO:0001046: core promoter sequence-specific DNA binding3.23E-03
38GO:0004930: G-protein coupled receptor activity3.60E-03
39GO:0009916: alternative oxidase activity3.60E-03
40GO:0015120: phosphoglycerate transmembrane transporter activity3.60E-03
41GO:0004834: tryptophan synthase activity3.60E-03
42GO:0004040: amidase activity4.62E-03
43GO:0005496: steroid binding4.62E-03
44GO:0047631: ADP-ribose diphosphatase activity4.62E-03
45GO:0005471: ATP:ADP antiporter activity4.62E-03
46GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.62E-03
47GO:0000210: NAD+ diphosphatase activity5.73E-03
48GO:0008519: ammonium transmembrane transporter activity5.73E-03
49GO:0004144: diacylglycerol O-acyltransferase activity6.91E-03
50GO:0004656: procollagen-proline 4-dioxygenase activity6.91E-03
51GO:0004723: calcium-dependent protein serine/threonine phosphatase activity6.91E-03
52GO:0004842: ubiquitin-protein transferase activity7.74E-03
53GO:0043295: glutathione binding8.18E-03
54GO:0047893: flavonol 3-O-glucosyltransferase activity9.53E-03
55GO:0004708: MAP kinase kinase activity9.53E-03
56GO:0004714: transmembrane receptor protein tyrosine kinase activity9.53E-03
57GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.03E-02
58GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.10E-02
59GO:0008142: oxysterol binding1.10E-02
60GO:0004630: phospholipase D activity1.10E-02
61GO:0005524: ATP binding1.41E-02
62GO:0005516: calmodulin binding1.49E-02
63GO:0004864: protein phosphatase inhibitor activity1.56E-02
64GO:0004713: protein tyrosine kinase activity1.56E-02
65GO:0005545: 1-phosphatidylinositol binding1.56E-02
66GO:0004674: protein serine/threonine kinase activity1.57E-02
67GO:0005543: phospholipid binding1.73E-02
68GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.97E-02
69GO:0005388: calcium-transporting ATPase activity2.09E-02
70GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.09E-02
71GO:0005315: inorganic phosphate transmembrane transporter activity2.09E-02
72GO:0004364: glutathione transferase activity2.40E-02
73GO:0008061: chitin binding2.47E-02
74GO:0008146: sulfotransferase activity2.47E-02
75GO:0030552: cAMP binding2.47E-02
76GO:0030553: cGMP binding2.47E-02
77GO:0016757: transferase activity, transferring glycosyl groups2.75E-02
78GO:0031418: L-ascorbic acid binding2.88E-02
79GO:0003954: NADH dehydrogenase activity2.88E-02
80GO:0051287: NAD binding3.02E-02
81GO:0005216: ion channel activity3.09E-02
82GO:0008324: cation transmembrane transporter activity3.09E-02
83GO:0051087: chaperone binding3.09E-02
84GO:0003700: transcription factor activity, sequence-specific DNA binding3.19E-02
85GO:0035251: UDP-glucosyltransferase activity3.30E-02
86GO:0033612: receptor serine/threonine kinase binding3.30E-02
87GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.52E-02
88GO:0043531: ADP binding4.15E-02
89GO:0046872: metal ion binding4.42E-02
90GO:0030551: cyclic nucleotide binding4.45E-02
91GO:0005451: monovalent cation:proton antiporter activity4.45E-02
92GO:0005249: voltage-gated potassium channel activity4.45E-02
93GO:0016874: ligase activity4.49E-02
94GO:0005525: GTP binding4.66E-02
95GO:0046873: metal ion transmembrane transporter activity4.69E-02
96GO:0030276: clathrin binding4.69E-02
97GO:0015035: protein disulfide oxidoreductase activity4.91E-02
98GO:0015299: solute:proton antiporter activity4.94E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane3.24E-07
2GO:0000813: ESCRT I complex2.28E-04
3GO:0000164: protein phosphatase type 1 complex2.28E-04
4GO:0005886: plasma membrane2.91E-04
5GO:0005953: CAAX-protein geranylgeranyltransferase complex5.23E-04
6GO:0005794: Golgi apparatus7.09E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane1.13E-03
8GO:0005901: caveola1.13E-03
9GO:0031314: extrinsic component of mitochondrial inner membrane1.13E-03
10GO:0030139: endocytic vesicle1.84E-03
11GO:0070062: extracellular exosome2.67E-03
12GO:0031902: late endosome membrane4.20E-03
13GO:0031463: Cul3-RING ubiquitin ligase complex5.73E-03
14GO:0005743: mitochondrial inner membrane6.66E-03
15GO:0000145: exocyst8.55E-03
16GO:0032580: Golgi cisterna membrane9.72E-03
17GO:0030665: clathrin-coated vesicle membrane1.40E-02
18GO:0005740: mitochondrial envelope1.56E-02
19GO:0030125: clathrin vesicle coat1.56E-02
20GO:0017119: Golgi transport complex1.56E-02
21GO:0000325: plant-type vacuole1.76E-02
22GO:0000139: Golgi membrane1.88E-02
23GO:0005578: proteinaceous extracellular matrix2.09E-02
24GO:0031012: extracellular matrix2.09E-02
25GO:0005768: endosome2.15E-02
26GO:0005789: endoplasmic reticulum membrane2.42E-02
27GO:0005795: Golgi stack2.47E-02
28GO:0005758: mitochondrial intermembrane space2.88E-02
29GO:0043231: intracellular membrane-bounded organelle2.90E-02
30GO:0070469: respiratory chain3.09E-02
31GO:0005741: mitochondrial outer membrane3.30E-02
32GO:0005905: clathrin-coated pit3.30E-02
33GO:0005887: integral component of plasma membrane3.93E-02
34GO:0030136: clathrin-coated vesicle4.21E-02
35GO:0005802: trans-Golgi network4.46E-02
36GO:0005770: late endosome4.69E-02
37GO:0009706: chloroplast inner membrane4.77E-02
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Gene type



Gene DE type