co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0033356: UDP-L-arabinose metabolic process	3.07E-06
3	GO:0071669: plant-type cell wall organization or biogenesis	1.59E-05
4	GO:0006680: glucosylceramide catabolic process	5.34E-05
5	GO:0042350: GDP-L-fucose biosynthetic process	5.34E-05
6	GO:0019567: arabinose biosynthetic process	5.34E-05
7	GO:0010421: hydrogen peroxide-mediated programmed cell death	5.34E-05
8	GO:0019478: D-amino acid catabolic process	5.34E-05
9	GO:0009805: coumarin biosynthetic process	1.30E-04
10	GO:0042853: L-alanine catabolic process	1.30E-04
11	GO:0006672: ceramide metabolic process	1.30E-04
12	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	2.22E-04
13	GO:0010253: UDP-rhamnose biosynthetic process	2.22E-04
14	GO:0010272: response to silver ion	2.22E-04
15	GO:0006556: S-adenosylmethionine biosynthetic process	2.22E-04
16	GO:0009226: nucleotide-sugar biosynthetic process	3.25E-04
17	GO:1902584: positive regulation of response to water deprivation	4.35E-04
18	GO:0009555: pollen development	4.52E-04
19	GO:0045927: positive regulation of growth	5.52E-04
20	GO:0030244: cellulose biosynthetic process	6.46E-04
21	GO:0006555: methionine metabolic process	6.76E-04
22	GO:0010315: auxin efflux	6.76E-04
23	GO:0009832: plant-type cell wall biogenesis	6.77E-04
24	GO:0019509: L-methionine salvage from methylthioadenosine	8.05E-04
25	GO:0034389: lipid particle organization	8.05E-04
26	GO:0080186: developmental vegetative growth	9.40E-04
27	GO:0006605: protein targeting	1.08E-03
28	GO:0009699: phenylpropanoid biosynthetic process	1.23E-03
29	GO:0006002: fructose 6-phosphate metabolic process	1.23E-03
30	GO:0071555: cell wall organization	1.30E-03
31	GO:0043067: regulation of programmed cell death	1.54E-03
32	GO:0006032: chitin catabolic process	1.71E-03
33	GO:0016441: posttranscriptional gene silencing	1.71E-03
34	GO:0051555: flavonol biosynthetic process	1.71E-03
35	GO:0000272: polysaccharide catabolic process	1.88E-03
36	GO:0006415: translational termination	1.88E-03
37	GO:0009651: response to salt stress	2.01E-03
38	GO:0055046: microgametogenesis	2.25E-03
39	GO:0034605: cellular response to heat	2.43E-03
40	GO:0046686: response to cadmium ion	2.55E-03
41	GO:0010053: root epidermal cell differentiation	2.63E-03
42	GO:0009225: nucleotide-sugar metabolic process	2.63E-03
43	GO:0016998: cell wall macromolecule catabolic process	3.46E-03
44	GO:0019915: lipid storage	3.46E-03
45	GO:0030433: ubiquitin-dependent ERAD pathway	3.68E-03
46	GO:0019748: secondary metabolic process	3.68E-03
47	GO:0030245: cellulose catabolic process	3.68E-03
48	GO:0006730: one-carbon metabolic process	3.68E-03
49	GO:0009693: ethylene biosynthetic process	3.90E-03
50	GO:0042127: regulation of cell proliferation	4.13E-03
51	GO:0016032: viral process	5.86E-03
52	GO:0071281: cellular response to iron ion	6.12E-03
53	GO:0001666: response to hypoxia	7.22E-03
54	GO:0009615: response to virus	7.22E-03
55	GO:0009816: defense response to bacterium, incompatible interaction	7.50E-03
56	GO:0009627: systemic acquired resistance	7.79E-03
57	GO:0006886: intracellular protein transport	7.79E-03
58	GO:0008219: cell death	8.68E-03
59	GO:0010043: response to zinc ion	9.61E-03
60	GO:0051707: response to other organism	1.23E-02
61	GO:0009636: response to toxic substance	1.33E-02
62	GO:0055114: oxidation-reduction process	1.36E-02
63	GO:0009738: abscisic acid-activated signaling pathway	1.60E-02
64	GO:0006096: glycolytic process	1.70E-02
65	GO:0009058: biosynthetic process	2.37E-02
66	GO:0040008: regulation of growth	2.77E-02
67	GO:0010150: leaf senescence	2.87E-02
68	GO:0010228: vegetative to reproductive phase transition of meristem	2.96E-02
69	GO:0016192: vesicle-mediated transport	4.73E-02
70	GO:0044550: secondary metabolite biosynthetic process	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0001729: ceramide kinase activity	0.00E+00
2	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
3	GO:0052691: UDP-arabinopyranose mutase activity	1.70E-07
4	GO:0016866: intramolecular transferase activity	3.07E-06
5	GO:0004348: glucosylceramidase activity	5.34E-05
6	GO:0050577: GDP-L-fucose synthase activity	5.34E-05
7	GO:0010297: heteropolysaccharide binding	1.30E-04
8	GO:0008460: dTDP-glucose 4,6-dehydratase activity	1.30E-04
9	GO:0010280: UDP-L-rhamnose synthase activity	1.30E-04
10	GO:0050377: UDP-glucose 4,6-dehydratase activity	1.30E-04
11	GO:0004478: methionine adenosyltransferase activity	2.22E-04
12	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	2.22E-04
13	GO:0016853: isomerase activity	3.02E-04
14	GO:0016149: translation release factor activity, codon specific	3.25E-04
15	GO:0016656: monodehydroascorbate reductase (NADH) activity	3.25E-04
16	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	3.25E-04
17	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	5.52E-04
18	GO:0003950: NAD+ ADP-ribosyltransferase activity	8.05E-04
19	GO:0008320: protein transmembrane transporter activity	9.40E-04
20	GO:0003872: 6-phosphofructokinase activity	9.40E-04
21	GO:0003951: NAD+ kinase activity	1.23E-03
22	GO:0004630: phospholipase D activity	1.23E-03
23	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.23E-03
24	GO:0003747: translation release factor activity	1.38E-03
25	GO:0031625: ubiquitin protein ligase binding	1.51E-03
26	GO:0004568: chitinase activity	1.71E-03
27	GO:0008061: chitin binding	2.63E-03
28	GO:0008810: cellulase activity	3.90E-03
29	GO:0016760: cellulose synthase (UDP-forming) activity	3.90E-03
30	GO:0050662: coenzyme binding	5.09E-03
31	GO:0051213: dioxygenase activity	7.22E-03
32	GO:0003746: translation elongation factor activity	1.02E-02
33	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.02E-02
34	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.09E-02
35	GO:0005198: structural molecule activity	1.33E-02
36	GO:0016887: ATPase activity	1.45E-02
37	GO:0005524: ATP binding	2.17E-02
38	GO:0030246: carbohydrate binding	2.23E-02
39	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.32E-02
40	GO:0019825: oxygen binding	2.36E-02
41	GO:0016829: lyase activity	2.41E-02
42	GO:0030170: pyridoxal phosphate binding	2.46E-02
43	GO:0005506: iron ion binding	3.30E-02
44	GO:0003824: catalytic activity	3.68E-02
45	GO:0050660: flavin adenine dinucleotide binding	4.34E-02
46	GO:0016491: oxidoreductase activity	4.41E-02
47	GO:0004497: monooxygenase activity	4.56E-02
48	GO:0061630: ubiquitin protein ligase activity	4.73E-02
49	GO:0046872: metal ion binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0000138: Golgi trans cisterna	5.34E-05
2	GO:0005789: endoplasmic reticulum membrane	8.25E-05
3	GO:0005945: 6-phosphofructokinase complex	5.52E-04
4	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	9.40E-04
5	GO:0005811: lipid particle	1.23E-03
6	GO:0008540: proteasome regulatory particle, base subcomplex	1.54E-03
7	GO:0005795: Golgi stack	2.63E-03
8	GO:0032580: Golgi cisterna membrane	6.39E-03
9	GO:0009506: plasmodesma	7.11E-03
10	GO:0005783: endoplasmic reticulum	7.23E-03
11	GO:0005774: vacuolar membrane	8.56E-03
12	GO:0005829: cytosol	9.17E-03
13	GO:0031902: late endosome membrane	1.16E-02
14	GO:0016021: integral component of membrane	1.19E-02
15	GO:0005794: Golgi apparatus	1.28E-02
16	GO:0000502: proteasome complex	1.51E-02
17	GO:0022626: cytosolic ribosome	1.59E-02
18	GO:0005737: cytoplasm	1.64E-02
19	GO:0009543: chloroplast thylakoid lumen	2.28E-02
20	GO:0005623: cell	2.32E-02
21	GO:0005886: plasma membrane	2.83E-02
22	GO:0005618: cell wall	3.85E-02
23	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.18E-02
24	GO:0016020: membrane	4.22E-02