co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G01820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033587: shikimate biosynthetic process	0.00E+00
2	GO:0032499: detection of peptidoglycan	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:0033198: response to ATP	0.00E+00
5	GO:0002764: immune response-regulating signaling pathway	0.00E+00
6	GO:0006468: protein phosphorylation	1.61E-09
7	GO:0042742: defense response to bacterium	3.08E-06
8	GO:0009863: salicylic acid mediated signaling pathway	5.24E-05
9	GO:0010200: response to chitin	5.75E-05
10	GO:0046777: protein autophosphorylation	6.25E-05
11	GO:0009423: chorismate biosynthetic process	1.08E-04
12	GO:0032491: detection of molecule of fungal origin	2.13E-04
13	GO:0048482: plant ovule morphogenesis	2.13E-04
14	GO:0010365: positive regulation of ethylene biosynthetic process	2.13E-04
15	GO:0051938: L-glutamate import	2.13E-04
16	GO:0051245: negative regulation of cellular defense response	2.13E-04
17	GO:0015969: guanosine tetraphosphate metabolic process	2.13E-04
18	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.13E-04
19	GO:0010941: regulation of cell death	2.13E-04
20	GO:1902182: shoot apical meristem development	2.13E-04
21	GO:0051180: vitamin transport	2.13E-04
22	GO:0010045: response to nickel cation	2.13E-04
23	GO:0030974: thiamine pyrophosphate transport	2.13E-04
24	GO:0009626: plant-type hypersensitive response	2.41E-04
25	GO:0009073: aromatic amino acid family biosynthetic process	4.43E-04
26	GO:0009817: defense response to fungus, incompatible interaction	4.71E-04
27	GO:0019725: cellular homeostasis	4.76E-04
28	GO:0043091: L-arginine import	4.76E-04
29	GO:0015802: basic amino acid transport	4.76E-04
30	GO:0080185: effector dependent induction by symbiont of host immune response	4.76E-04
31	GO:0031349: positive regulation of defense response	4.76E-04
32	GO:0015893: drug transport	4.76E-04
33	GO:0060919: auxin influx	4.76E-04
34	GO:0045732: positive regulation of protein catabolic process	4.76E-04
35	GO:0010042: response to manganese ion	4.76E-04
36	GO:0015865: purine nucleotide transport	4.76E-04
37	GO:0010541: acropetal auxin transport	4.76E-04
38	GO:0034605: cellular response to heat	6.47E-04
39	GO:0002237: response to molecule of bacterial origin	6.47E-04
40	GO:0010167: response to nitrate	7.24E-04
41	GO:0051176: positive regulation of sulfur metabolic process	7.74E-04
42	GO:0046621: negative regulation of organ growth	7.74E-04
43	GO:0010498: proteasomal protein catabolic process	7.74E-04
44	GO:0002230: positive regulation of defense response to virus by host	7.74E-04
45	GO:0016045: detection of bacterium	7.74E-04
46	GO:0010359: regulation of anion channel activity	7.74E-04
47	GO:0009617: response to bacterium	9.03E-04
48	GO:0003333: amino acid transmembrane transport	1.07E-03
49	GO:0071323: cellular response to chitin	1.10E-03
50	GO:0000187: activation of MAPK activity	1.10E-03
51	GO:1902358: sulfate transmembrane transport	1.10E-03
52	GO:0046902: regulation of mitochondrial membrane permeability	1.10E-03
53	GO:0030100: regulation of endocytosis	1.10E-03
54	GO:0072583: clathrin-dependent endocytosis	1.10E-03
55	GO:0006612: protein targeting to membrane	1.10E-03
56	GO:0031348: negative regulation of defense response	1.17E-03
57	GO:0006952: defense response	1.21E-03
58	GO:0009909: regulation of flower development	1.44E-03
59	GO:0060548: negative regulation of cell death	1.47E-03
60	GO:0046345: abscisic acid catabolic process	1.47E-03
61	GO:0010363: regulation of plant-type hypersensitive response	1.47E-03
62	GO:0010508: positive regulation of autophagy	1.47E-03
63	GO:0071219: cellular response to molecule of bacterial origin	1.47E-03
64	GO:0018344: protein geranylgeranylation	1.87E-03
65	GO:0010405: arabinogalactan protein metabolic process	2.31E-03
66	GO:0048317: seed morphogenesis	2.31E-03
67	GO:0010315: auxin efflux	2.31E-03
68	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.31E-03
69	GO:0007165: signal transduction	2.66E-03
70	GO:2000037: regulation of stomatal complex patterning	2.77E-03
71	GO:0051607: defense response to virus	2.90E-03
72	GO:0009615: response to virus	3.07E-03
73	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.25E-03
74	GO:0010038: response to metal ion	3.26E-03
75	GO:1900056: negative regulation of leaf senescence	3.26E-03
76	GO:0070370: cellular heat acclimation	3.26E-03
77	GO:0032875: regulation of DNA endoreduplication	3.78E-03
78	GO:0045010: actin nucleation	3.78E-03
79	GO:0009061: anaerobic respiration	3.78E-03
80	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.78E-03
81	GO:0030162: regulation of proteolysis	3.78E-03
82	GO:1900150: regulation of defense response to fungus	3.78E-03
83	GO:0010204: defense response signaling pathway, resistance gene-independent	4.33E-03
84	GO:0009932: cell tip growth	4.33E-03
85	GO:0009060: aerobic respiration	4.90E-03
86	GO:0006098: pentose-phosphate shunt	4.90E-03
87	GO:0009867: jasmonic acid mediated signaling pathway	5.07E-03
88	GO:0048268: clathrin coat assembly	5.50E-03
89	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.50E-03
90	GO:0006887: exocytosis	6.02E-03
91	GO:0006897: endocytosis	6.02E-03
92	GO:0043069: negative regulation of programmed cell death	6.12E-03
93	GO:0015770: sucrose transport	6.77E-03
94	GO:0016925: protein sumoylation	7.44E-03
95	GO:0015706: nitrate transport	7.44E-03
96	GO:0006855: drug transmembrane transport	7.62E-03
97	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	7.91E-03
98	GO:0010229: inflorescence development	8.13E-03
99	GO:0055046: microgametogenesis	8.13E-03
100	GO:0009785: blue light signaling pathway	8.13E-03
101	GO:0009737: response to abscisic acid	8.56E-03
102	GO:0035556: intracellular signal transduction	8.67E-03
103	GO:0009809: lignin biosynthetic process	8.80E-03
104	GO:0010540: basipetal auxin transport	8.84E-03
105	GO:0009266: response to temperature stimulus	8.84E-03
106	GO:0007034: vacuolar transport	8.84E-03
107	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.44E-03
108	GO:0070588: calcium ion transmembrane transport	9.58E-03
109	GO:0046854: phosphatidylinositol phosphorylation	9.58E-03
110	GO:0010053: root epidermal cell differentiation	9.58E-03
111	GO:0005985: sucrose metabolic process	9.58E-03
112	GO:0016310: phosphorylation	1.13E-02
113	GO:0009620: response to fungus	1.15E-02
114	GO:0009695: jasmonic acid biosynthetic process	1.19E-02
115	GO:0048278: vesicle docking	1.27E-02
116	GO:0009742: brassinosteroid mediated signaling pathway	1.33E-02
117	GO:0010017: red or far-red light signaling pathway	1.36E-02
118	GO:0009814: defense response, incompatible interaction	1.36E-02
119	GO:0016226: iron-sulfur cluster assembly	1.36E-02
120	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.36E-02
121	GO:0010227: floral organ abscission	1.45E-02
122	GO:0009408: response to heat	1.48E-02
123	GO:0006284: base-excision repair	1.53E-02
124	GO:0009561: megagametogenesis	1.53E-02
125	GO:0070417: cellular response to cold	1.62E-02
126	GO:0006342: chromatin silencing	1.81E-02
127	GO:0071472: cellular response to salt stress	1.81E-02
128	GO:0061025: membrane fusion	1.91E-02
129	GO:0048544: recognition of pollen	1.91E-02
130	GO:0009749: response to glucose	2.00E-02
131	GO:0006891: intra-Golgi vesicle-mediated transport	2.10E-02
132	GO:0002229: defense response to oomycetes	2.10E-02
133	GO:0009630: gravitropism	2.20E-02
134	GO:0016032: viral process	2.20E-02
135	GO:0019760: glucosinolate metabolic process	2.41E-02
136	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.44E-02
137	GO:0006904: vesicle docking involved in exocytosis	2.52E-02
138	GO:0000910: cytokinesis	2.62E-02
139	GO:0009911: positive regulation of flower development	2.73E-02
140	GO:0001666: response to hypoxia	2.73E-02
141	GO:0009816: defense response to bacterium, incompatible interaction	2.84E-02
142	GO:0009627: systemic acquired resistance	2.95E-02
143	GO:0042128: nitrate assimilation	2.95E-02
144	GO:0006906: vesicle fusion	2.95E-02
145	GO:0048573: photoperiodism, flowering	3.07E-02
146	GO:0009611: response to wounding	3.14E-02
147	GO:0016049: cell growth	3.18E-02
148	GO:0015031: protein transport	3.28E-02
149	GO:0008219: cell death	3.30E-02
150	GO:0048767: root hair elongation	3.42E-02
151	GO:0006499: N-terminal protein myristoylation	3.54E-02
152	GO:0009409: response to cold	3.60E-02
153	GO:0006970: response to osmotic stress	3.63E-02
154	GO:0010043: response to zinc ion	3.66E-02
155	GO:0048527: lateral root development	3.66E-02
156	GO:0006865: amino acid transport	3.78E-02
157	GO:0045087: innate immune response	3.91E-02
158	GO:0048366: leaf development	3.96E-02
159	GO:0006810: transport	4.04E-02
160	GO:0055085: transmembrane transport	4.10E-02
161	GO:0006457: protein folding	4.19E-02
162	GO:0006839: mitochondrial transport	4.29E-02
163	GO:0050832: defense response to fungus	4.34E-02
164	GO:0009926: auxin polar transport	4.68E-02
165	GO:0051707: response to other organism	4.68E-02
166	GO:0009640: photomorphogenesis	4.68E-02
167	GO:0000209: protein polyubiquitination	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
3	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
4	GO:0003856: 3-dehydroquinate synthase activity	0.00E+00
5	GO:0010290: chlorophyll catabolite transmembrane transporter activity	0.00E+00
6	GO:0005522: profilin binding	0.00E+00
7	GO:0015431: glutathione S-conjugate-exporting ATPase activity	0.00E+00
8	GO:0004107: chorismate synthase activity	0.00E+00
9	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
10	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
11	GO:0016301: kinase activity	9.86E-10
12	GO:0004674: protein serine/threonine kinase activity	2.31E-09
13	GO:0005524: ATP binding	4.16E-09
14	GO:0008559: xenobiotic-transporting ATPase activity	1.60E-05
15	GO:0019199: transmembrane receptor protein kinase activity	3.29E-05
16	GO:0005515: protein binding	1.89E-04
17	GO:0032050: clathrin heavy chain binding	2.13E-04
18	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.13E-04
19	GO:1901149: salicylic acid binding	2.13E-04
20	GO:0090422: thiamine pyrophosphate transporter activity	2.13E-04
21	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.13E-04
22	GO:0004672: protein kinase activity	3.56E-04
23	GO:0008728: GTP diphosphokinase activity	4.76E-04
24	GO:0046423: allene-oxide cyclase activity	7.74E-04
25	GO:0016595: glutamate binding	7.74E-04
26	GO:0019948: SUMO activating enzyme activity	7.74E-04
27	GO:0016174: NAD(P)H oxidase activity	7.74E-04
28	GO:0043130: ubiquitin binding	8.90E-04
29	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.92E-04
30	GO:0033612: receptor serine/threonine kinase binding	1.07E-03
31	GO:0015189: L-lysine transmembrane transporter activity	1.10E-03
32	GO:0015181: arginine transmembrane transporter activity	1.10E-03
33	GO:0010328: auxin influx transmembrane transporter activity	1.47E-03
34	GO:0005313: L-glutamate transmembrane transporter activity	1.47E-03
35	GO:0043531: ADP binding	1.53E-03
36	GO:0005471: ATP:ADP antiporter activity	1.87E-03
37	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.87E-03
38	GO:0008725: DNA-3-methyladenine glycosylase activity	1.87E-03
39	GO:0010294: abscisic acid glucosyltransferase activity	1.87E-03
40	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.31E-03
41	GO:0008506: sucrose:proton symporter activity	3.26E-03
42	GO:0008375: acetylglucosaminyltransferase activity	3.43E-03
43	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.61E-03
44	GO:0004708: MAP kinase kinase activity	3.78E-03
45	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.78E-03
46	GO:0052747: sinapyl alcohol dehydrogenase activity	3.78E-03
47	GO:0015238: drug transmembrane transporter activity	4.20E-03
48	GO:0008271: secondary active sulfate transmembrane transporter activity	4.33E-03
49	GO:0004430: 1-phosphatidylinositol 4-kinase activity	4.33E-03
50	GO:0005525: GTP binding	4.75E-03
51	GO:0071949: FAD binding	4.90E-03
52	GO:0015112: nitrate transmembrane transporter activity	5.50E-03
53	GO:0015174: basic amino acid transmembrane transporter activity	5.50E-03
54	GO:0004568: chitinase activity	6.12E-03
55	GO:0005545: 1-phosphatidylinositol binding	6.12E-03
56	GO:0008047: enzyme activator activity	6.12E-03
57	GO:0004713: protein tyrosine kinase activity	6.12E-03
58	GO:0008515: sucrose transmembrane transporter activity	6.77E-03
59	GO:0005543: phospholipid binding	6.77E-03
60	GO:0015293: symporter activity	7.34E-03
61	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.44E-03
62	GO:0015116: sulfate transmembrane transporter activity	7.44E-03
63	GO:0008378: galactosyltransferase activity	7.44E-03
64	GO:0031072: heat shock protein binding	8.13E-03
65	GO:0005388: calcium-transporting ATPase activity	8.13E-03
66	GO:0010329: auxin efflux transmembrane transporter activity	8.13E-03
67	GO:0005215: transporter activity	8.15E-03
68	GO:0008061: chitin binding	9.58E-03
69	GO:0015171: amino acid transmembrane transporter activity	9.75E-03
70	GO:0031625: ubiquitin protein ligase binding	9.75E-03
71	GO:0043424: protein histidine kinase binding	1.19E-02
72	GO:0003924: GTPase activity	1.48E-02
73	GO:0003713: transcription coactivator activity	1.81E-02
74	GO:0030276: clathrin binding	1.81E-02
75	GO:0010181: FMN binding	1.91E-02
76	GO:0005509: calcium ion binding	2.05E-02
77	GO:0015297: antiporter activity	2.08E-02
78	GO:0051015: actin filament binding	2.31E-02
79	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.52E-02
80	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.95E-02
81	GO:0004683: calmodulin-dependent protein kinase activity	3.07E-02
82	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.18E-02
83	GO:0046982: protein heterodimerization activity	3.31E-02
84	GO:0004842: ubiquitin-protein transferase activity	3.70E-02
85	GO:0000149: SNARE binding	4.16E-02
86	GO:0004497: monooxygenase activity	4.17E-02
87	GO:0042393: histone binding	4.29E-02
88	GO:0043565: sequence-specific DNA binding	4.45E-02
89	GO:0005484: SNAP receptor activity	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.78E-09
2	GO:0005911: cell-cell junction	2.13E-04
3	GO:0005953: CAAX-protein geranylgeranyltransferase complex	2.13E-04
4	GO:0005901: caveola	4.76E-04
5	GO:0030139: endocytic vesicle	7.74E-04
6	GO:0012505: endomembrane system	1.90E-03
7	GO:0016021: integral component of membrane	3.24E-03
8	GO:0000325: plant-type vacuole	4.62E-03
9	GO:0005887: integral component of plasma membrane	5.32E-03
10	GO:0005768: endosome	5.69E-03
11	GO:0005740: mitochondrial envelope	6.12E-03
12	GO:0030125: clathrin vesicle coat	6.12E-03
13	GO:0090404: pollen tube tip	6.77E-03
14	GO:0005774: vacuolar membrane	8.00E-03
15	GO:0005795: Golgi stack	9.58E-03
16	GO:0043234: protein complex	1.03E-02
17	GO:0010008: endosome membrane	1.08E-02
18	GO:0016020: membrane	1.17E-02
19	GO:0009506: plasmodesma	1.27E-02
20	GO:0005905: clathrin-coated pit	1.27E-02
21	GO:0005654: nucleoplasm	1.53E-02
22	GO:0030136: clathrin-coated vesicle	1.62E-02
23	GO:0043231: intracellular membrane-bounded organelle	1.68E-02
24	GO:0009504: cell plate	2.00E-02
25	GO:0000145: exocyst	2.20E-02
26	GO:0019005: SCF ubiquitin ligase complex	3.30E-02
27	GO:0031201: SNARE complex	4.41E-02
28	GO:0031902: late endosome membrane	4.41E-02
29	GO:0090406: pollen tube	4.68E-02