Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G01640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:0015690: aluminum cation transport0.00E+00
4GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
5GO:0018063: cytochrome c-heme linkage0.00E+00
6GO:1900384: regulation of flavonol biosynthetic process9.69E-05
7GO:0032107: regulation of response to nutrient levels9.69E-05
8GO:1902600: hydrogen ion transmembrane transport9.69E-05
9GO:0080173: male-female gamete recognition during double fertilization9.69E-05
10GO:0010230: alternative respiration9.69E-05
11GO:0010482: regulation of epidermal cell division9.69E-05
12GO:0071668: plant-type cell wall assembly2.28E-04
13GO:0055088: lipid homeostasis2.28E-04
14GO:0019521: D-gluconate metabolic process2.28E-04
15GO:0015908: fatty acid transport2.28E-04
16GO:0000719: photoreactive repair2.28E-04
17GO:0009636: response to toxic substance2.51E-04
18GO:0010366: negative regulation of ethylene biosynthetic process3.80E-04
19GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway3.80E-04
20GO:0006048: UDP-N-acetylglucosamine biosynthetic process3.80E-04
21GO:0051289: protein homotetramerization5.46E-04
22GO:1901141: regulation of lignin biosynthetic process7.26E-04
23GO:0006621: protein retention in ER lumen7.26E-04
24GO:0051567: histone H3-K9 methylation7.26E-04
25GO:0031365: N-terminal protein amino acid modification9.17E-04
26GO:0016094: polyprenol biosynthetic process9.17E-04
27GO:0009164: nucleoside catabolic process9.17E-04
28GO:0046283: anthocyanin-containing compound metabolic process9.17E-04
29GO:0009627: systemic acquired resistance1.18E-03
30GO:0042372: phylloquinone biosynthetic process1.34E-03
31GO:0009407: toxin catabolic process1.50E-03
32GO:1900057: positive regulation of leaf senescence1.57E-03
33GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.57E-03
34GO:0016559: peroxisome fission1.81E-03
35GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.81E-03
36GO:0017004: cytochrome complex assembly2.07E-03
37GO:0010208: pollen wall assembly2.07E-03
38GO:0022900: electron transport chain2.07E-03
39GO:0006997: nucleus organization2.07E-03
40GO:0010204: defense response signaling pathway, resistance gene-independent2.07E-03
41GO:0006098: pentose-phosphate shunt2.33E-03
42GO:0010112: regulation of systemic acquired resistance2.33E-03
43GO:0009870: defense response signaling pathway, resistance gene-dependent2.90E-03
44GO:0006032: chitin catabolic process2.90E-03
45GO:0048765: root hair cell differentiation3.20E-03
46GO:0000266: mitochondrial fission3.50E-03
47GO:0009225: nucleotide-sugar metabolic process4.49E-03
48GO:0080147: root hair cell development5.19E-03
49GO:0010026: trichome differentiation5.55E-03
50GO:0043622: cortical microtubule organization5.55E-03
51GO:0016998: cell wall macromolecule catabolic process5.93E-03
52GO:0009269: response to desiccation5.93E-03
53GO:0007005: mitochondrion organization6.31E-03
54GO:0071456: cellular response to hypoxia6.31E-03
55GO:0009411: response to UV6.70E-03
56GO:0009625: response to insect6.70E-03
57GO:0006012: galactose metabolic process6.70E-03
58GO:0070417: cellular response to cold7.51E-03
59GO:0009611: response to wounding7.83E-03
60GO:0042391: regulation of membrane potential7.93E-03
61GO:0007166: cell surface receptor signaling pathway8.28E-03
62GO:0006520: cellular amino acid metabolic process8.35E-03
63GO:0009646: response to absence of light8.79E-03
64GO:0006891: intra-Golgi vesicle-mediated transport9.68E-03
65GO:0071805: potassium ion transmembrane transport1.16E-02
66GO:0009615: response to virus1.25E-02
67GO:0010311: lateral root formation1.57E-02
68GO:0048527: lateral root development1.68E-02
69GO:0006979: response to oxidative stress1.88E-02
70GO:0006952: defense response1.95E-02
71GO:0009751: response to salicylic acid2.03E-02
72GO:0051707: response to other organism2.14E-02
73GO:0009753: response to jasmonic acid2.21E-02
74GO:0050832: defense response to fungus2.26E-02
75GO:0006855: drug transmembrane transport2.39E-02
76GO:0009664: plant-type cell wall organization2.52E-02
77GO:0015031: protein transport2.52E-02
78GO:0006486: protein glycosylation2.65E-02
79GO:0006813: potassium ion transport2.65E-02
80GO:0009626: plant-type hypersensitive response3.12E-02
81GO:0005975: carbohydrate metabolic process3.14E-02
82GO:0009058: biosynthetic process4.15E-02
83GO:0007165: signal transduction4.63E-02
RankGO TermAdjusted P value
1GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
2GO:0015245: fatty acid transporter activity9.69E-05
3GO:0090353: polygalacturonase inhibitor activity9.69E-05
4GO:2001227: quercitrin binding9.69E-05
5GO:2001147: camalexin binding9.69E-05
6GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity3.80E-04
7GO:0043169: cation binding3.80E-04
8GO:0032403: protein complex binding3.80E-04
9GO:0022890: inorganic cation transmembrane transporter activity5.46E-04
10GO:0009916: alternative oxidase activity7.26E-04
11GO:0004737: pyruvate decarboxylase activity7.26E-04
12GO:0046923: ER retention sequence binding7.26E-04
13GO:0050378: UDP-glucuronate 4-epimerase activity7.26E-04
14GO:0002094: polyprenyltransferase activity9.17E-04
15GO:0030976: thiamine pyrophosphate binding1.12E-03
16GO:0030247: polysaccharide binding1.24E-03
17GO:0004656: procollagen-proline 4-dioxygenase activity1.34E-03
18GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1.34E-03
19GO:0003978: UDP-glucose 4-epimerase activity1.34E-03
20GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.34E-03
21GO:0016831: carboxy-lyase activity1.57E-03
22GO:0008235: metalloexopeptidase activity1.57E-03
23GO:0043295: glutathione binding1.57E-03
24GO:0004033: aldo-keto reductase (NADP) activity1.81E-03
25GO:0004364: glutathione transferase activity2.12E-03
26GO:0047617: acyl-CoA hydrolase activity2.61E-03
27GO:0004568: chitinase activity2.90E-03
28GO:0004177: aminopeptidase activity3.20E-03
29GO:0015386: potassium:proton antiporter activity3.20E-03
30GO:0005509: calcium ion binding3.87E-03
31GO:0030552: cAMP binding4.49E-03
32GO:0030553: cGMP binding4.49E-03
33GO:0001046: core promoter sequence-specific DNA binding5.19E-03
34GO:0005216: ion channel activity5.55E-03
35GO:0015079: potassium ion transmembrane transporter activity5.55E-03
36GO:0004499: N,N-dimethylaniline monooxygenase activity7.10E-03
37GO:0005249: voltage-gated potassium channel activity7.93E-03
38GO:0030551: cyclic nucleotide binding7.93E-03
39GO:0005199: structural constituent of cell wall8.35E-03
40GO:0015299: solute:proton antiporter activity8.79E-03
41GO:0050662: coenzyme binding8.79E-03
42GO:0004872: receptor activity9.23E-03
43GO:0016791: phosphatase activity1.11E-02
44GO:0008483: transaminase activity1.16E-02
45GO:0008375: acetylglucosaminyltransferase activity1.36E-02
46GO:0016787: hydrolase activity1.39E-02
47GO:0004806: triglyceride lipase activity1.41E-02
48GO:0004721: phosphoprotein phosphatase activity1.41E-02
49GO:0015238: drug transmembrane transporter activity1.57E-02
50GO:0030145: manganese ion binding1.68E-02
51GO:0050897: cobalt ion binding1.68E-02
52GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.79E-02
53GO:0050661: NADP binding1.96E-02
54GO:0009055: electron carrier activity2.21E-02
55GO:0051537: 2 iron, 2 sulfur cluster binding2.27E-02
56GO:0005198: structural molecule activity2.33E-02
57GO:0016298: lipase activity2.72E-02
58GO:0016746: transferase activity, transferring acyl groups3.48E-02
59GO:0030170: pyridoxal phosphate binding4.30E-02
60GO:0008565: protein transporter activity4.54E-02
61GO:0004674: protein serine/threonine kinase activity4.71E-02
62GO:0015297: antiporter activity4.86E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0009530: primary cell wall3.80E-04
3GO:0005802: trans-Golgi network6.58E-04
4GO:0000813: ESCRT I complex9.17E-04
5GO:0005794: Golgi apparatus1.35E-03
6GO:0005768: endosome3.73E-03
7GO:0005795: Golgi stack4.49E-03
8GO:0016021: integral component of membrane5.44E-03
9GO:0070469: respiratory chain5.55E-03
10GO:0005741: mitochondrial outer membrane5.93E-03
11GO:0005777: peroxisome9.07E-03
12GO:0009504: cell plate9.23E-03
13GO:0031965: nuclear membrane9.23E-03
14GO:0032580: Golgi cisterna membrane1.11E-02
15GO:0005778: peroxisomal membrane1.16E-02
16GO:0031225: anchored component of membrane1.34E-02
17GO:0005743: mitochondrial inner membrane1.92E-02
18GO:0005635: nuclear envelope2.78E-02
19GO:0005829: cytosol3.21E-02
20GO:0009706: chloroplast inner membrane3.41E-02
21GO:0005618: cell wall3.45E-02
22GO:0005886: plasma membrane3.58E-02
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Gene type



Gene DE type