co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G01310

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0009733: response to auxin	1.88E-08
4	GO:0061062: regulation of nematode larval development	8.68E-07
5	GO:0046620: regulation of organ growth	8.68E-05
6	GO:0051013: microtubule severing	1.31E-04
7	GO:0045786: negative regulation of cell cycle	1.31E-04
8	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.31E-04
9	GO:0006351: transcription, DNA-templated	1.84E-04
10	GO:0001736: establishment of planar polarity	3.03E-04
11	GO:0009926: auxin polar transport	3.72E-04
12	GO:0006863: purine nucleobase transport	4.19E-04
13	GO:0071555: cell wall organization	4.98E-04
14	GO:0006065: UDP-glucuronate biosynthetic process	4.99E-04
15	GO:0048575: short-day photoperiodism, flowering	4.99E-04
16	GO:0090506: axillary shoot meristem initiation	4.99E-04
17	GO:0010226: response to lithium ion	4.99E-04
18	GO:0009686: gibberellin biosynthetic process	6.66E-04
19	GO:0010321: regulation of vegetative phase change	7.14E-04
20	GO:0007276: gamete generation	7.14E-04
21	GO:0042127: regulation of cell proliferation	7.24E-04
22	GO:0009624: response to nematode	8.48E-04
23	GO:0042991: transcription factor import into nucleus	9.47E-04
24	GO:0048825: cotyledon development	1.04E-03
25	GO:0048497: maintenance of floral organ identity	1.20E-03
26	GO:0045487: gibberellin catabolic process	1.20E-03
27	GO:0019760: glucosinolate metabolic process	1.33E-03
28	GO:0009913: epidermal cell differentiation	1.47E-03
29	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.47E-03
30	GO:0003006: developmental process involved in reproduction	1.47E-03
31	GO:0010942: positive regulation of cell death	1.47E-03
32	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	1.47E-03
33	GO:0048573: photoperiodism, flowering	1.85E-03
34	GO:0009734: auxin-activated signaling pathway	1.99E-03
35	GO:0010444: guard mother cell differentiation	2.06E-03
36	GO:0007050: cell cycle arrest	2.06E-03
37	GO:0000082: G1/S transition of mitotic cell cycle	2.06E-03
38	GO:0006355: regulation of transcription, DNA-templated	2.29E-03
39	GO:0006402: mRNA catabolic process	2.39E-03
40	GO:0010492: maintenance of shoot apical meristem identity	2.39E-03
41	GO:0009908: flower development	2.43E-03
42	GO:0048589: developmental growth	3.08E-03
43	GO:0048507: meristem development	3.08E-03
44	GO:0009744: response to sucrose	3.32E-03
45	GO:0048366: leaf development	3.57E-03
46	GO:0048829: root cap development	3.84E-03
47	GO:0009641: shade avoidance	3.84E-03
48	GO:0006949: syncytium formation	3.84E-03
49	GO:0009664: plant-type cell wall organization	4.17E-03
50	GO:0009750: response to fructose	4.24E-03
51	GO:0048765: root hair cell differentiation	4.24E-03
52	GO:0008285: negative regulation of cell proliferation	4.24E-03
53	GO:0010152: pollen maturation	4.65E-03
54	GO:0005983: starch catabolic process	4.65E-03
55	GO:0010582: floral meristem determinacy	4.65E-03
56	GO:2000028: regulation of photoperiodism, flowering	5.08E-03
57	GO:0010102: lateral root morphogenesis	5.08E-03
58	GO:0010207: photosystem II assembly	5.52E-03
59	GO:0010223: secondary shoot formation	5.52E-03
60	GO:0009887: animal organ morphogenesis	5.52E-03
61	GO:0048467: gynoecium development	5.52E-03
62	GO:0009825: multidimensional cell growth	5.97E-03
63	GO:0048364: root development	6.59E-03
64	GO:0080147: root hair cell development	6.91E-03
65	GO:0019953: sexual reproduction	7.40E-03
66	GO:0043622: cortical microtubule organization	7.40E-03
67	GO:0003333: amino acid transmembrane transport	7.91E-03
68	GO:0001944: vasculature development	8.95E-03
69	GO:0010091: trichome branching	9.49E-03
70	GO:0048443: stamen development	9.49E-03
71	GO:0040008: regulation of growth	1.05E-02
72	GO:0000271: polysaccharide biosynthetic process	1.06E-02
73	GO:0000226: microtubule cytoskeleton organization	1.06E-02
74	GO:0009958: positive gravitropism	1.12E-02
75	GO:0009741: response to brassinosteroid	1.12E-02
76	GO:0045489: pectin biosynthetic process	1.12E-02
77	GO:0007018: microtubule-based movement	1.18E-02
78	GO:0009739: response to gibberellin	1.23E-02
79	GO:0009749: response to glucose	1.24E-02
80	GO:0071554: cell wall organization or biogenesis	1.30E-02
81	GO:0002229: defense response to oomycetes	1.30E-02
82	GO:0010583: response to cyclopentenone	1.36E-02
83	GO:0032502: developmental process	1.36E-02
84	GO:0051301: cell division	1.44E-02
85	GO:0009828: plant-type cell wall loosening	1.49E-02
86	GO:0009826: unidimensional cell growth	1.64E-02
87	GO:0010411: xyloglucan metabolic process	1.89E-02
88	GO:0009723: response to ethylene	1.97E-02
89	GO:0009832: plant-type cell wall biogenesis	2.11E-02
90	GO:0010311: lateral root formation	2.11E-02
91	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.19E-02
92	GO:0006865: amino acid transport	2.33E-02
93	GO:0016051: carbohydrate biosynthetic process	2.41E-02
94	GO:0045892: negative regulation of transcription, DNA-templated	2.57E-02
95	GO:0030001: metal ion transport	2.64E-02
96	GO:0006839: mitochondrial transport	2.64E-02
97	GO:0042546: cell wall biogenesis	2.96E-02
98	GO:0016042: lipid catabolic process	3.04E-02
99	GO:0009751: response to salicylic acid	3.08E-02
100	GO:0042538: hyperosmotic salinity response	3.39E-02
101	GO:0009736: cytokinin-activated signaling pathway	3.56E-02
102	GO:0006096: glycolytic process	4.01E-02
103	GO:0048316: seed development	4.11E-02
104	GO:0009740: gibberellic acid mediated signaling pathway	4.39E-02
105	GO:0051726: regulation of cell cycle	4.77E-02
106	GO:0009742: brassinosteroid mediated signaling pathway	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0010011: auxin binding	1.44E-05
2	GO:0008568: microtubule-severing ATPase activity	1.31E-04
3	GO:0019156: isoamylase activity	3.03E-04
4	GO:0045543: gibberellin 2-beta-dioxygenase activity	3.03E-04
5	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	3.03E-04
6	GO:0043565: sequence-specific DNA binding	4.35E-04
7	GO:0003979: UDP-glucose 6-dehydrogenase activity	4.99E-04
8	GO:0005345: purine nucleobase transmembrane transporter activity	5.12E-04
9	GO:0045544: gibberellin 20-oxidase activity	7.14E-04
10	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	7.14E-04
11	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	7.14E-04
12	GO:0003700: transcription factor activity, sequence-specific DNA binding	9.42E-04
13	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	9.47E-04
14	GO:0010328: auxin influx transmembrane transporter activity	9.47E-04
15	GO:0030332: cyclin binding	1.47E-03
16	GO:0004556: alpha-amylase activity	1.47E-03
17	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	1.47E-03
18	GO:0003777: microtubule motor activity	4.95E-03
19	GO:0003725: double-stranded RNA binding	5.08E-03
20	GO:0003712: transcription cofactor activity	5.97E-03
21	GO:0009055: electron carrier activity	6.82E-03
22	GO:0033612: receptor serine/threonine kinase binding	7.91E-03
23	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.42E-03
24	GO:0005199: structural constituent of cell wall	1.12E-02
25	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.12E-02
26	GO:0008017: microtubule binding	1.15E-02
27	GO:0005515: protein binding	1.28E-02
28	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.30E-02
29	GO:0003677: DNA binding	1.56E-02
30	GO:0016413: O-acetyltransferase activity	1.62E-02
31	GO:0016788: hydrolase activity, acting on ester bonds	1.74E-02
32	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.89E-02
33	GO:0005096: GTPase activator activity	2.11E-02
34	GO:0052689: carboxylic ester hydrolase activity	2.34E-02
35	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.56E-02
36	GO:0042803: protein homodimerization activity	2.66E-02
37	GO:0043621: protein self-association	3.05E-02
38	GO:0015293: symporter activity	3.13E-02
39	GO:0051287: NAD binding	3.30E-02
40	GO:0015171: amino acid transmembrane transporter activity	3.83E-02
41	GO:0046983: protein dimerization activity	4.48E-02
42	GO:0003779: actin binding	4.48E-02
43	GO:0015035: protein disulfide oxidoreductase activity	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009569: chloroplast starch grain	3.03E-04
3	GO:0009531: secondary cell wall	7.14E-04
4	GO:0009986: cell surface	2.06E-03
5	GO:0005874: microtubule	3.64E-03
6	GO:0009508: plastid chromosome	5.08E-03
7	GO:0005875: microtubule associated complex	6.43E-03
8	GO:0005871: kinesin complex	1.00E-02
9	GO:0046658: anchored component of plasma membrane	1.46E-02
10	GO:0009295: nucleoid	1.55E-02
11	GO:0030529: intracellular ribonucleoprotein complex	1.68E-02