GO Enrichment Analysis of Co-expressed Genes with
AT3G01080
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006216: cytidine catabolic process | 0.00E+00 |
| 2 | GO:0019427: acetyl-CoA biosynthetic process from acetate | 0.00E+00 |
| 3 | GO:0048034: heme O biosynthetic process | 0.00E+00 |
| 4 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 5 | GO:0072722: response to amitrole | 0.00E+00 |
| 6 | GO:0042964: thioredoxin reduction | 7.75E-05 |
| 7 | GO:0006083: acetate metabolic process | 7.75E-05 |
| 8 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.85E-04 |
| 9 | GO:0051252: regulation of RNA metabolic process | 1.85E-04 |
| 10 | GO:0000162: tryptophan biosynthetic process | 2.04E-04 |
| 11 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 3.11E-04 |
| 12 | GO:0010272: response to silver ion | 3.11E-04 |
| 13 | GO:0000187: activation of MAPK activity | 4.49E-04 |
| 14 | GO:0070301: cellular response to hydrogen peroxide | 4.49E-04 |
| 15 | GO:0006623: protein targeting to vacuole | 5.25E-04 |
| 16 | GO:0010600: regulation of auxin biosynthetic process | 5.98E-04 |
| 17 | GO:1901002: positive regulation of response to salt stress | 5.98E-04 |
| 18 | GO:0010188: response to microbial phytotoxin | 5.98E-04 |
| 19 | GO:0046283: anthocyanin-containing compound metabolic process | 7.57E-04 |
| 20 | GO:0006564: L-serine biosynthetic process | 7.57E-04 |
| 21 | GO:0051607: defense response to virus | 7.57E-04 |
| 22 | GO:0060918: auxin transport | 9.24E-04 |
| 23 | GO:0009972: cytidine deamination | 9.24E-04 |
| 24 | GO:0009082: branched-chain amino acid biosynthetic process | 1.10E-03 |
| 25 | GO:0009099: valine biosynthetic process | 1.10E-03 |
| 26 | GO:0009407: toxin catabolic process | 1.13E-03 |
| 27 | GO:0071669: plant-type cell wall organization or biogenesis | 1.29E-03 |
| 28 | GO:0050829: defense response to Gram-negative bacterium | 1.29E-03 |
| 29 | GO:0006099: tricarboxylic acid cycle | 1.35E-03 |
| 30 | GO:0009819: drought recovery | 1.48E-03 |
| 31 | GO:0006102: isocitrate metabolic process | 1.48E-03 |
| 32 | GO:0019430: removal of superoxide radicals | 1.69E-03 |
| 33 | GO:0009097: isoleucine biosynthetic process | 1.69E-03 |
| 34 | GO:0009636: response to toxic substance | 1.85E-03 |
| 35 | GO:0006783: heme biosynthetic process | 1.91E-03 |
| 36 | GO:0010112: regulation of systemic acquired resistance | 1.91E-03 |
| 37 | GO:0045454: cell redox homeostasis | 1.93E-03 |
| 38 | GO:0009098: leucine biosynthetic process | 2.14E-03 |
| 39 | GO:0006032: chitin catabolic process | 2.37E-03 |
| 40 | GO:0000272: polysaccharide catabolic process | 2.61E-03 |
| 41 | GO:0006979: response to oxidative stress | 2.80E-03 |
| 42 | GO:0008152: metabolic process | 2.84E-03 |
| 43 | GO:0071365: cellular response to auxin stimulus | 2.86E-03 |
| 44 | GO:0010102: lateral root morphogenesis | 3.12E-03 |
| 45 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 3.12E-03 |
| 46 | GO:0007030: Golgi organization | 3.66E-03 |
| 47 | GO:0034976: response to endoplasmic reticulum stress | 3.94E-03 |
| 48 | GO:0045333: cellular respiration | 4.23E-03 |
| 49 | GO:0006874: cellular calcium ion homeostasis | 4.52E-03 |
| 50 | GO:0010073: meristem maintenance | 4.52E-03 |
| 51 | GO:0016998: cell wall macromolecule catabolic process | 4.82E-03 |
| 52 | GO:0009814: defense response, incompatible interaction | 5.13E-03 |
| 53 | GO:0030245: cellulose catabolic process | 5.13E-03 |
| 54 | GO:0045490: pectin catabolic process | 5.37E-03 |
| 55 | GO:0010227: floral organ abscission | 5.45E-03 |
| 56 | GO:0009306: protein secretion | 5.77E-03 |
| 57 | GO:0009617: response to bacterium | 6.40E-03 |
| 58 | GO:0010051: xylem and phloem pattern formation | 6.44E-03 |
| 59 | GO:0006468: protein phosphorylation | 6.67E-03 |
| 60 | GO:0045489: pectin biosynthetic process | 6.78E-03 |
| 61 | GO:0006662: glycerol ether metabolic process | 6.78E-03 |
| 62 | GO:0048544: recognition of pollen | 7.13E-03 |
| 63 | GO:0009851: auxin biosynthetic process | 7.49E-03 |
| 64 | GO:0010193: response to ozone | 7.85E-03 |
| 65 | GO:0000302: response to reactive oxygen species | 7.85E-03 |
| 66 | GO:1901657: glycosyl compound metabolic process | 8.59E-03 |
| 67 | GO:0006464: cellular protein modification process | 8.97E-03 |
| 68 | GO:0009615: response to virus | 1.02E-02 |
| 69 | GO:0009627: systemic acquired resistance | 1.10E-02 |
| 70 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.14E-02 |
| 71 | GO:0016049: cell growth | 1.18E-02 |
| 72 | GO:0009817: defense response to fungus, incompatible interaction | 1.22E-02 |
| 73 | GO:0010311: lateral root formation | 1.27E-02 |
| 74 | GO:0009631: cold acclimation | 1.36E-02 |
| 75 | GO:0034599: cellular response to oxidative stress | 1.49E-02 |
| 76 | GO:0006631: fatty acid metabolic process | 1.64E-02 |
| 77 | GO:0042542: response to hydrogen peroxide | 1.68E-02 |
| 78 | GO:0015031: protein transport | 1.72E-02 |
| 79 | GO:0000209: protein polyubiquitination | 1.78E-02 |
| 80 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.98E-02 |
| 81 | GO:0000165: MAPK cascade | 1.98E-02 |
| 82 | GO:0009846: pollen germination | 2.04E-02 |
| 83 | GO:0046686: response to cadmium ion | 2.23E-02 |
| 84 | GO:0006417: regulation of translation | 2.30E-02 |
| 85 | GO:0048316: seed development | 2.47E-02 |
| 86 | GO:0009620: response to fungus | 2.58E-02 |
| 87 | GO:0042545: cell wall modification | 2.69E-02 |
| 88 | GO:0009611: response to wounding | 2.77E-02 |
| 89 | GO:0016036: cellular response to phosphate starvation | 3.86E-02 |
| 90 | GO:0010150: leaf senescence | 4.06E-02 |
| 91 | GO:0010468: regulation of gene expression | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047844: deoxycytidine deaminase activity | 0.00E+00 |
| 2 | GO:0008495: protoheme IX farnesyltransferase activity | 0.00E+00 |
| 3 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 4 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 7.75E-05 |
| 5 | GO:0010179: IAA-Ala conjugate hydrolase activity | 7.75E-05 |
| 6 | GO:0003987: acetate-CoA ligase activity | 7.75E-05 |
| 7 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 7.75E-05 |
| 8 | GO:0008428: ribonuclease inhibitor activity | 1.85E-04 |
| 9 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 1.85E-04 |
| 10 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.85E-04 |
| 11 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 3.11E-04 |
| 12 | GO:0004049: anthranilate synthase activity | 3.11E-04 |
| 13 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 4.49E-04 |
| 14 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 4.49E-04 |
| 15 | GO:0052656: L-isoleucine transaminase activity | 4.49E-04 |
| 16 | GO:0052654: L-leucine transaminase activity | 4.49E-04 |
| 17 | GO:0052655: L-valine transaminase activity | 4.49E-04 |
| 18 | GO:0004791: thioredoxin-disulfide reductase activity | 4.90E-04 |
| 19 | GO:0004084: branched-chain-amino-acid transaminase activity | 5.98E-04 |
| 20 | GO:0004659: prenyltransferase activity | 5.98E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.98E-04 |
| 22 | GO:0008237: metallopeptidase activity | 7.15E-04 |
| 23 | GO:0008948: oxaloacetate decarboxylase activity | 7.57E-04 |
| 24 | GO:0016208: AMP binding | 9.24E-04 |
| 25 | GO:0035252: UDP-xylosyltransferase activity | 9.24E-04 |
| 26 | GO:0004126: cytidine deaminase activity | 1.10E-03 |
| 27 | GO:0004602: glutathione peroxidase activity | 1.10E-03 |
| 28 | GO:0004311: farnesyltranstransferase activity | 1.48E-03 |
| 29 | GO:0004708: MAP kinase kinase activity | 1.48E-03 |
| 30 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 1.48E-03 |
| 31 | GO:0004364: glutathione transferase activity | 1.58E-03 |
| 32 | GO:0004568: chitinase activity | 2.37E-03 |
| 33 | GO:0004674: protein serine/threonine kinase activity | 2.75E-03 |
| 34 | GO:0015035: protein disulfide oxidoreductase activity | 3.22E-03 |
| 35 | GO:0031624: ubiquitin conjugating enzyme binding | 3.38E-03 |
| 36 | GO:0005217: intracellular ligand-gated ion channel activity | 3.66E-03 |
| 37 | GO:0008061: chitin binding | 3.66E-03 |
| 38 | GO:0004970: ionotropic glutamate receptor activity | 3.66E-03 |
| 39 | GO:0008810: cellulase activity | 5.45E-03 |
| 40 | GO:0003756: protein disulfide isomerase activity | 5.77E-03 |
| 41 | GO:0003727: single-stranded RNA binding | 5.77E-03 |
| 42 | GO:0047134: protein-disulfide reductase activity | 6.10E-03 |
| 43 | GO:0001085: RNA polymerase II transcription factor binding | 6.78E-03 |
| 44 | GO:0010181: FMN binding | 7.13E-03 |
| 45 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.59E-03 |
| 46 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 9.36E-03 |
| 47 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 9.36E-03 |
| 48 | GO:0016597: amino acid binding | 9.75E-03 |
| 49 | GO:0016301: kinase activity | 1.11E-02 |
| 50 | GO:0102483: scopolin beta-glucosidase activity | 1.14E-02 |
| 51 | GO:0005509: calcium ion binding | 1.15E-02 |
| 52 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.36E-02 |
| 53 | GO:0008422: beta-glucosidase activity | 1.54E-02 |
| 54 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.54E-02 |
| 55 | GO:0051287: NAD binding | 1.98E-02 |
| 56 | GO:0045330: aspartyl esterase activity | 2.30E-02 |
| 57 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.47E-02 |
| 58 | GO:0030599: pectinesterase activity | 2.64E-02 |
| 59 | GO:0016746: transferase activity, transferring acyl groups | 2.81E-02 |
| 60 | GO:0016740: transferase activity | 3.30E-02 |
| 61 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.54E-02 |
| 62 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.57E-02 |
| 63 | GO:0005507: copper ion binding | 3.85E-02 |
| 64 | GO:0046910: pectinesterase inhibitor activity | 3.86E-02 |
| 65 | GO:0008194: UDP-glycosyltransferase activity | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005788: endoplasmic reticulum lumen | 4.94E-05 |
| 2 | GO:0045252: oxoglutarate dehydrogenase complex | 7.75E-05 |
| 3 | GO:0017119: Golgi transport complex | 8.82E-05 |
| 4 | GO:0005950: anthranilate synthase complex | 1.85E-04 |
| 5 | GO:0005886: plasma membrane | 6.66E-04 |
| 6 | GO:0030173: integral component of Golgi membrane | 1.10E-03 |
| 7 | GO:0009514: glyoxysome | 1.69E-03 |
| 8 | GO:0031901: early endosome membrane | 1.91E-03 |
| 9 | GO:0030665: clathrin-coated vesicle membrane | 2.14E-03 |
| 10 | GO:0000139: Golgi membrane | 4.38E-03 |
| 11 | GO:0005794: Golgi apparatus | 4.67E-03 |
| 12 | GO:0005829: cytosol | 6.28E-03 |
| 13 | GO:0016592: mediator complex | 8.22E-03 |
| 14 | GO:0071944: cell periphery | 8.59E-03 |
| 15 | GO:0005802: trans-Golgi network | 9.45E-03 |
| 16 | GO:0005667: transcription factor complex | 1.10E-02 |
| 17 | GO:0005768: endosome | 1.11E-02 |
| 18 | GO:0000151: ubiquitin ligase complex | 1.22E-02 |
| 19 | GO:0031902: late endosome membrane | 1.64E-02 |
| 20 | GO:0009505: plant-type cell wall | 1.69E-02 |
| 21 | GO:0005783: endoplasmic reticulum | 1.71E-02 |
| 22 | GO:0005887: integral component of plasma membrane | 2.07E-02 |
| 23 | GO:0005773: vacuole | 3.39E-02 |
| 24 | GO:0005759: mitochondrial matrix | 3.80E-02 |
| 25 | GO:0016021: integral component of membrane | 4.49E-02 |
| 26 | GO:0009570: chloroplast stroma | 4.60E-02 |