co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G01060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0071484: cellular response to light intensity	1.11E-04
3	GO:0006021: inositol biosynthetic process	1.53E-04
4	GO:0010117: photoprotection	1.98E-04
5	GO:0035434: copper ion transmembrane transport	1.98E-04
6	GO:0016123: xanthophyll biosynthetic process	1.98E-04
7	GO:0008272: sulfate transport	3.49E-04
8	GO:0071482: cellular response to light stimulus	4.60E-04
9	GO:0009688: abscisic acid biosynthetic process	6.38E-04
10	GO:0009773: photosynthetic electron transport in photosystem I	7.00E-04
11	GO:0006825: copper ion transport	1.18E-03
12	GO:0010118: stomatal movement	1.65E-03
13	GO:0006606: protein import into nucleus	1.65E-03
14	GO:0010182: sugar mediated signaling pathway	1.73E-03
15	GO:0019252: starch biosynthetic process	1.90E-03
16	GO:0008654: phospholipid biosynthetic process	1.90E-03
17	GO:0048235: pollen sperm cell differentiation	2.08E-03
18	GO:0015995: chlorophyll biosynthetic process	2.84E-03
19	GO:0010114: response to red light	4.25E-03
20	GO:0051707: response to other organism	4.25E-03
21	GO:0009644: response to high light intensity	4.48E-03
22	GO:0006813: potassium ion transport	5.21E-03
23	GO:0043086: negative regulation of catalytic activity	5.85E-03
24	GO:0009624: response to nematode	6.64E-03
25	GO:0009414: response to water deprivation	7.01E-03
26	GO:0006810: transport	1.06E-02
27	GO:0009658: chloroplast organization	1.32E-02
28	GO:0006970: response to osmotic stress	1.39E-02
29	GO:0080167: response to karrikin	1.54E-02
30	GO:0044550: secondary metabolite biosynthetic process	1.63E-02
31	GO:0015979: photosynthesis	1.69E-02
32	GO:0009408: response to heat	2.03E-02
33	GO:0048364: root development	2.09E-02
34	GO:0008152: metabolic process	2.18E-02
35	GO:0055085: transmembrane transport	3.63E-02

Rank	GO Term	Adjusted P value
1	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
2	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
3	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
4	GO:0033840: NDP-glucose-starch glucosyltransferase activity	0.00E+00
5	GO:0008509: anion transmembrane transporter activity	4.12E-05
6	GO:0004512: inositol-3-phosphate synthase activity	4.12E-05
7	GO:0004373: glycogen (starch) synthase activity	7.34E-05
8	GO:0009011: starch synthase activity	1.53E-04
9	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.98E-04
10	GO:0015140: malate transmembrane transporter activity	3.49E-04
11	GO:0005375: copper ion transmembrane transporter activity	4.60E-04
12	GO:0071949: FAD binding	5.18E-04
13	GO:0003954: NADH dehydrogenase activity	1.10E-03
14	GO:0008324: cation transmembrane transporter activity	1.18E-03
15	GO:0016597: amino acid binding	2.45E-03
16	GO:0016829: lyase activity	8.21E-03
17	GO:0008565: protein transporter activity	8.80E-03
18	GO:0046910: pectinesterase inhibitor activity	9.26E-03
19	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.15E-02
20	GO:0009055: electron carrier activity	2.14E-02
21	GO:0016887: ATPase activity	2.78E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	6.66E-06
2	GO:0031304: intrinsic component of mitochondrial inner membrane	4.12E-05
3	GO:0009569: chloroplast starch grain	4.12E-05
4	GO:0009534: chloroplast thylakoid	4.16E-05
5	GO:0009535: chloroplast thylakoid membrane	4.11E-04
6	GO:0010287: plastoglobule	5.23E-04
7	GO:0009941: chloroplast envelope	1.25E-03
8	GO:0012505: endomembrane system	6.51E-03
9	GO:0009706: chloroplast inner membrane	6.64E-03
10	GO:0009705: plant-type vacuole membrane	9.73E-03
11	GO:0031969: chloroplast membrane	1.54E-02
12	GO:0005777: peroxisome	3.38E-02
13	GO:0009579: thylakoid	3.48E-02
14	GO:0031225: anchored component of membrane	4.20E-02
15	GO:0005622: intracellular	4.61E-02