GO Enrichment Analysis of Co-expressed Genes with
AT2G47470
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006489: dolichyl diphosphate biosynthetic process | 0.00E+00 |
| 2 | GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process | 0.00E+00 |
| 3 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 4 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.59E-12 |
| 5 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 4.00E-06 |
| 6 | GO:0080120: CAAX-box protein maturation | 3.50E-05 |
| 7 | GO:0071586: CAAX-box protein processing | 3.50E-05 |
| 8 | GO:0097502: mannosylation | 3.50E-05 |
| 9 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 8.78E-05 |
| 10 | GO:0010372: positive regulation of gibberellin biosynthetic process | 8.78E-05 |
| 11 | GO:0051788: response to misfolded protein | 8.78E-05 |
| 12 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.03E-04 |
| 13 | GO:0010359: regulation of anion channel activity | 1.52E-04 |
| 14 | GO:0010498: proteasomal protein catabolic process | 1.52E-04 |
| 15 | GO:0055074: calcium ion homeostasis | 1.52E-04 |
| 16 | GO:0006413: translational initiation | 1.62E-04 |
| 17 | GO:0046686: response to cadmium ion | 1.87E-04 |
| 18 | GO:0010255: glucose mediated signaling pathway | 2.25E-04 |
| 19 | GO:0001676: long-chain fatty acid metabolic process | 2.25E-04 |
| 20 | GO:0009647: skotomorphogenesis | 2.25E-04 |
| 21 | GO:0030163: protein catabolic process | 2.30E-04 |
| 22 | GO:0016579: protein deubiquitination | 2.78E-04 |
| 23 | GO:0010363: regulation of plant-type hypersensitive response | 3.05E-04 |
| 24 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.05E-04 |
| 25 | GO:0018279: protein N-linked glycosylation via asparagine | 3.89E-04 |
| 26 | GO:0006564: L-serine biosynthetic process | 3.89E-04 |
| 27 | GO:0006461: protein complex assembly | 3.89E-04 |
| 28 | GO:0001731: formation of translation preinitiation complex | 4.78E-04 |
| 29 | GO:0043248: proteasome assembly | 4.78E-04 |
| 30 | GO:0000054: ribosomal subunit export from nucleus | 5.70E-04 |
| 31 | GO:0048528: post-embryonic root development | 6.66E-04 |
| 32 | GO:0000338: protein deneddylation | 6.66E-04 |
| 33 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 6.66E-04 |
| 34 | GO:0031540: regulation of anthocyanin biosynthetic process | 7.68E-04 |
| 35 | GO:0009651: response to salt stress | 7.68E-04 |
| 36 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 7.68E-04 |
| 37 | GO:0006402: mRNA catabolic process | 7.68E-04 |
| 38 | GO:0006972: hyperosmotic response | 8.71E-04 |
| 39 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 8.71E-04 |
| 40 | GO:0006820: anion transport | 1.44E-03 |
| 41 | GO:0006446: regulation of translational initiation | 1.70E-03 |
| 42 | GO:0034605: cellular response to heat | 1.70E-03 |
| 43 | GO:0000162: tryptophan biosynthetic process | 1.97E-03 |
| 44 | GO:0006487: protein N-linked glycosylation | 2.12E-03 |
| 45 | GO:0010187: negative regulation of seed germination | 2.12E-03 |
| 46 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.17E-03 |
| 47 | GO:0009411: response to UV | 2.71E-03 |
| 48 | GO:0040007: growth | 2.71E-03 |
| 49 | GO:0009306: protein secretion | 2.87E-03 |
| 50 | GO:0009561: megagametogenesis | 2.87E-03 |
| 51 | GO:0006606: protein import into nucleus | 3.20E-03 |
| 52 | GO:0008360: regulation of cell shape | 3.36E-03 |
| 53 | GO:0009646: response to absence of light | 3.53E-03 |
| 54 | GO:0048825: cotyledon development | 3.70E-03 |
| 55 | GO:0010193: response to ozone | 3.88E-03 |
| 56 | GO:0031047: gene silencing by RNA | 4.06E-03 |
| 57 | GO:0009408: response to heat | 5.43E-03 |
| 58 | GO:0006888: ER to Golgi vesicle-mediated transport | 5.58E-03 |
| 59 | GO:0006397: mRNA processing | 5.67E-03 |
| 60 | GO:0006811: ion transport | 6.40E-03 |
| 61 | GO:0006499: N-terminal protein myristoylation | 6.40E-03 |
| 62 | GO:0010043: response to zinc ion | 6.61E-03 |
| 63 | GO:0010119: regulation of stomatal movement | 6.61E-03 |
| 64 | GO:0045087: innate immune response | 7.05E-03 |
| 65 | GO:0009867: jasmonic acid mediated signaling pathway | 7.05E-03 |
| 66 | GO:0006631: fatty acid metabolic process | 7.95E-03 |
| 67 | GO:0009640: photomorphogenesis | 8.41E-03 |
| 68 | GO:0000209: protein polyubiquitination | 8.65E-03 |
| 69 | GO:0009735: response to cytokinin | 8.81E-03 |
| 70 | GO:0009555: pollen development | 9.64E-03 |
| 71 | GO:0009664: plant-type cell wall organization | 9.86E-03 |
| 72 | GO:0009793: embryo development ending in seed dormancy | 9.90E-03 |
| 73 | GO:0009736: cytokinin-activated signaling pathway | 1.04E-02 |
| 74 | GO:0006486: protein glycosylation | 1.04E-02 |
| 75 | GO:0009585: red, far-red light phototransduction | 1.04E-02 |
| 76 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.06E-02 |
| 77 | GO:0009553: embryo sac development | 1.30E-02 |
| 78 | GO:0018105: peptidyl-serine phosphorylation | 1.36E-02 |
| 79 | GO:0040008: regulation of growth | 1.89E-02 |
| 80 | GO:0009617: response to bacterium | 2.22E-02 |
| 81 | GO:0009826: unidimensional cell growth | 2.60E-02 |
| 82 | GO:0009723: response to ethylene | 2.96E-02 |
| 83 | GO:0048366: leaf development | 3.00E-02 |
| 84 | GO:0046777: protein autophosphorylation | 3.27E-02 |
| 85 | GO:0045454: cell redox homeostasis | 3.54E-02 |
| 86 | GO:0007275: multicellular organism development | 3.85E-02 |
| 87 | GO:0006468: protein phosphorylation | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 2 | GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 3 | GO:0000033: alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 4 | GO:0004298: threonine-type endopeptidase activity | 1.26E-06 |
| 5 | GO:0036402: proteasome-activating ATPase activity | 4.00E-06 |
| 6 | GO:0008233: peptidase activity | 3.13E-05 |
| 7 | GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | 3.50E-05 |
| 8 | GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity | 3.50E-05 |
| 9 | GO:0017025: TBP-class protein binding | 5.82E-05 |
| 10 | GO:0004640: phosphoribosylanthranilate isomerase activity | 8.78E-05 |
| 11 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 8.78E-05 |
| 12 | GO:0004617: phosphoglycerate dehydrogenase activity | 8.78E-05 |
| 13 | GO:0004127: cytidylate kinase activity | 8.78E-05 |
| 14 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 9.30E-05 |
| 15 | GO:0003743: translation initiation factor activity | 2.22E-04 |
| 16 | GO:0009041: uridylate kinase activity | 2.25E-04 |
| 17 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.89E-04 |
| 18 | GO:0004656: procollagen-proline 4-dioxygenase activity | 5.70E-04 |
| 19 | GO:0051920: peroxiredoxin activity | 5.70E-04 |
| 20 | GO:0102391: decanoate--CoA ligase activity | 5.70E-04 |
| 21 | GO:0004467: long-chain fatty acid-CoA ligase activity | 6.66E-04 |
| 22 | GO:0005524: ATP binding | 6.86E-04 |
| 23 | GO:0015288: porin activity | 7.68E-04 |
| 24 | GO:0016209: antioxidant activity | 7.68E-04 |
| 25 | GO:0003843: 1,3-beta-D-glucan synthase activity | 8.71E-04 |
| 26 | GO:0008308: voltage-gated anion channel activity | 8.71E-04 |
| 27 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.20E-03 |
| 28 | GO:0004175: endopeptidase activity | 1.70E-03 |
| 29 | GO:0031418: L-ascorbic acid binding | 2.12E-03 |
| 30 | GO:0005516: calmodulin binding | 2.35E-03 |
| 31 | GO:0003713: transcription coactivator activity | 3.36E-03 |
| 32 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 3.88E-03 |
| 33 | GO:0004518: nuclease activity | 4.06E-03 |
| 34 | GO:0004197: cysteine-type endopeptidase activity | 4.06E-03 |
| 35 | GO:0016597: amino acid binding | 4.80E-03 |
| 36 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.38E-03 |
| 37 | GO:0003924: GTPase activity | 5.43E-03 |
| 38 | GO:0004683: calmodulin-dependent protein kinase activity | 5.58E-03 |
| 39 | GO:0004222: metalloendopeptidase activity | 6.40E-03 |
| 40 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 7.05E-03 |
| 41 | GO:0016887: ATPase activity | 8.41E-03 |
| 42 | GO:0051287: NAD binding | 9.61E-03 |
| 43 | GO:0031625: ubiquitin protein ligase binding | 1.11E-02 |
| 44 | GO:0030246: carbohydrate binding | 1.30E-02 |
| 45 | GO:0051082: unfolded protein binding | 1.33E-02 |
| 46 | GO:0008026: ATP-dependent helicase activity | 1.38E-02 |
| 47 | GO:0005525: GTP binding | 1.59E-02 |
| 48 | GO:0005509: calcium ion binding | 1.81E-02 |
| 49 | GO:0004601: peroxidase activity | 2.67E-02 |
| 50 | GO:0003729: mRNA binding | 2.92E-02 |
| 51 | GO:0061630: ubiquitin protein ligase activity | 3.23E-02 |
| 52 | GO:0004722: protein serine/threonine phosphatase activity | 3.78E-02 |
| 53 | GO:0016787: hydrolase activity | 4.19E-02 |
| 54 | GO:0003723: RNA binding | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 2.52E-10 |
| 2 | GO:0005839: proteasome core complex | 1.26E-06 |
| 3 | GO:0031597: cytosolic proteasome complex | 5.84E-06 |
| 4 | GO:0031595: nuclear proteasome complex | 8.12E-06 |
| 5 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.40E-05 |
| 6 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.19E-05 |
| 7 | GO:0016442: RISC complex | 3.50E-05 |
| 8 | GO:0046861: glyoxysomal membrane | 1.52E-04 |
| 9 | GO:0005774: vacuolar membrane | 1.53E-04 |
| 10 | GO:0005829: cytosol | 2.27E-04 |
| 11 | GO:0005773: vacuole | 3.88E-04 |
| 12 | GO:0008250: oligosaccharyltransferase complex | 3.89E-04 |
| 13 | GO:0016282: eukaryotic 43S preinitiation complex | 4.78E-04 |
| 14 | GO:0033290: eukaryotic 48S preinitiation complex | 5.70E-04 |
| 15 | GO:0005783: endoplasmic reticulum | 6.76E-04 |
| 16 | GO:0046930: pore complex | 8.71E-04 |
| 17 | GO:0009514: glyoxysome | 8.71E-04 |
| 18 | GO:0000148: 1,3-beta-D-glucan synthase complex | 8.71E-04 |
| 19 | GO:0005635: nuclear envelope | 8.77E-04 |
| 20 | GO:0008180: COP9 signalosome | 9.78E-04 |
| 21 | GO:0010494: cytoplasmic stress granule | 9.78E-04 |
| 22 | GO:0005789: endoplasmic reticulum membrane | 1.08E-03 |
| 23 | GO:0005730: nucleolus | 1.26E-03 |
| 24 | GO:0048471: perinuclear region of cytoplasm | 1.32E-03 |
| 25 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.32E-03 |
| 26 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.84E-03 |
| 27 | GO:0005741: mitochondrial outer membrane | 2.41E-03 |
| 28 | GO:0009504: cell plate | 3.70E-03 |
| 29 | GO:0005618: cell wall | 4.58E-03 |
| 30 | GO:0016020: membrane | 4.79E-03 |
| 31 | GO:0000932: P-body | 4.99E-03 |
| 32 | GO:0005788: endoplasmic reticulum lumen | 5.18E-03 |
| 33 | GO:0019005: SCF ubiquitin ligase complex | 5.99E-03 |
| 34 | GO:0009506: plasmodesma | 8.40E-03 |
| 35 | GO:0009507: chloroplast | 8.49E-03 |
| 36 | GO:0005747: mitochondrial respiratory chain complex I | 1.19E-02 |
| 37 | GO:0005634: nucleus | 1.46E-02 |
| 38 | GO:0005623: cell | 1.59E-02 |
| 39 | GO:0005622: intracellular | 1.72E-02 |
| 40 | GO:0048046: apoplast | 1.76E-02 |
| 41 | GO:0005737: cytoplasm | 2.20E-02 |
| 42 | GO:0009536: plastid | 2.40E-02 |
| 43 | GO:0005794: Golgi apparatus | 4.36E-02 |
| 44 | GO:0005886: plasma membrane | 4.72E-02 |