Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46710

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0061062: regulation of nematode larval development1.19E-06
3GO:0009686: gibberellin biosynthetic process4.81E-05
4GO:0032958: inositol phosphate biosynthetic process1.56E-04
5GO:0010070: zygote asymmetric cell division1.56E-04
6GO:0051013: microtubule severing1.56E-04
7GO:0045786: negative regulation of cell cycle1.56E-04
8GO:0010726: positive regulation of hydrogen peroxide metabolic process1.56E-04
9GO:0010069: zygote asymmetric cytokinesis in embryo sac3.55E-04
10GO:0009887: animal organ morphogenesis4.23E-04
11GO:0006863: purine nucleobase transport5.28E-04
12GO:0048575: short-day photoperiodism, flowering5.82E-04
13GO:0090506: axillary shoot meristem initiation5.82E-04
14GO:0010321: regulation of vegetative phase change8.33E-04
15GO:0006020: inositol metabolic process8.33E-04
16GO:0007276: gamete generation8.33E-04
17GO:0042127: regulation of cell proliferation9.07E-04
18GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.99E-04
19GO:0009733: response to auxin1.01E-03
20GO:0042991: transcription factor import into nucleus1.10E-03
21GO:0006351: transcription, DNA-templated1.24E-03
22GO:0045487: gibberellin catabolic process1.40E-03
23GO:0010583: response to cyclopentenone1.48E-03
24GO:0019760: glucosinolate metabolic process1.67E-03
25GO:0010942: positive regulation of cell death1.72E-03
26GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity1.72E-03
27GO:0009861: jasmonic acid and ethylene-dependent systemic resistance2.06E-03
28GO:0010444: guard mother cell differentiation2.42E-03
29GO:0007050: cell cycle arrest2.42E-03
30GO:0000082: G1/S transition of mitotic cell cycle2.42E-03
31GO:0010492: maintenance of shoot apical meristem identity2.80E-03
32GO:0048589: developmental growth3.63E-03
33GO:0009416: response to light stimulus4.08E-03
34GO:0042546: cell wall biogenesis4.38E-03
35GO:0009641: shade avoidance4.52E-03
36GO:0006949: syncytium formation4.52E-03
37GO:0006782: protoporphyrinogen IX biosynthetic process4.52E-03
38GO:0051301: cell division4.65E-03
39GO:0048366: leaf development4.83E-03
40GO:0008285: negative regulation of cell proliferation4.99E-03
41GO:0010152: pollen maturation5.48E-03
42GO:0005983: starch catabolic process5.48E-03
43GO:0046274: lignin catabolic process5.98E-03
44GO:0010102: lateral root morphogenesis5.98E-03
45GO:0010207: photosystem II assembly6.50E-03
46GO:0010223: secondary shoot formation6.50E-03
47GO:0006302: double-strand break repair6.50E-03
48GO:0048768: root hair cell tip growth6.50E-03
49GO:0009825: multidimensional cell growth7.04E-03
50GO:0009740: gibberellic acid mediated signaling pathway7.59E-03
51GO:0009624: response to nematode8.06E-03
52GO:0019953: sexual reproduction8.74E-03
53GO:0043622: cortical microtubule organization8.74E-03
54GO:0048364: root development8.93E-03
55GO:0051321: meiotic cell cycle9.34E-03
56GO:0001944: vasculature development1.06E-02
57GO:0010091: trichome branching1.12E-02
58GO:0048443: stamen development1.12E-02
59GO:0006355: regulation of transcription, DNA-templated1.16E-02
60GO:0000271: polysaccharide biosynthetic process1.25E-02
61GO:0000226: microtubule cytoskeleton organization1.25E-02
62GO:0009741: response to brassinosteroid1.32E-02
63GO:0045489: pectin biosynthetic process1.32E-02
64GO:0007018: microtubule-based movement1.39E-02
65GO:0048825: cotyledon development1.46E-02
66GO:0009908: flower development1.54E-02
67GO:0071554: cell wall organization or biogenesis1.54E-02
68GO:0002229: defense response to oomycetes1.54E-02
69GO:0009739: response to gibberellin1.56E-02
70GO:0032502: developmental process1.61E-02
71GO:0009828: plant-type cell wall loosening1.76E-02
72GO:0009826: unidimensional cell growth2.09E-02
73GO:0016567: protein ubiquitination2.16E-02
74GO:0010411: xyloglucan metabolic process2.24E-02
75GO:0048573: photoperiodism, flowering2.24E-02
76GO:0015995: chlorophyll biosynthetic process2.24E-02
77GO:0009817: defense response to fungus, incompatible interaction2.41E-02
78GO:0009832: plant-type cell wall biogenesis2.50E-02
79GO:0006811: ion transport2.58E-02
80GO:0016051: carbohydrate biosynthetic process2.85E-02
81GO:0030001: metal ion transport3.13E-02
82GO:0006839: mitochondrial transport3.13E-02
83GO:0045892: negative regulation of transcription, DNA-templated3.27E-02
84GO:0009744: response to sucrose3.42E-02
85GO:0009664: plant-type cell wall organization4.01E-02
86GO:0009736: cytokinin-activated signaling pathway4.22E-02
87GO:0071555: cell wall organization4.22E-02
88GO:0006417: regulation of translation4.54E-02
89GO:0030154: cell differentiation4.68E-02
90GO:0048316: seed development4.86E-02
RankGO TermAdjusted P value
1GO:0009899: ent-kaurene synthase activity0.00E+00
2GO:0008568: microtubule-severing ATPase activity1.56E-04
3GO:0033857: diphosphoinositol-pentakisphosphate kinase activity1.56E-04
4GO:0000829: inositol heptakisphosphate kinase activity1.56E-04
5GO:0000828: inositol hexakisphosphate kinase activity1.56E-04
6GO:0019156: isoamylase activity3.55E-04
7GO:0017022: myosin binding3.55E-04
8GO:0045543: gibberellin 2-beta-dioxygenase activity3.55E-04
9GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity3.55E-04
10GO:0004109: coproporphyrinogen oxidase activity3.55E-04
11GO:0008805: carbon-monoxide oxygenase activity3.55E-04
12GO:0005345: purine nucleobase transmembrane transporter activity6.43E-04
13GO:0043565: sequence-specific DNA binding8.32E-04
14GO:0045544: gibberellin 20-oxidase activity8.33E-04
15GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity8.33E-04
16GO:0010011: auxin binding1.10E-03
17GO:0030332: cyclin binding1.72E-03
18GO:0004556: alpha-amylase activity1.72E-03
19GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity1.72E-03
20GO:0003700: transcription factor activity, sequence-specific DNA binding2.41E-03
21GO:0052716: hydroquinone:oxygen oxidoreductase activity5.48E-03
22GO:0003725: double-stranded RNA binding5.98E-03
23GO:0003777: microtubule motor activity6.27E-03
24GO:0003712: transcription cofactor activity7.04E-03
25GO:0009055: electron carrier activity9.25E-03
26GO:0033612: receptor serine/threonine kinase binding9.34E-03
27GO:0008408: 3'-5' exonuclease activity9.34E-03
28GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity9.96E-03
29GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.15E-02
30GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity1.32E-02
31GO:0001085: RNA polymerase II transcription factor binding1.32E-02
32GO:0016853: isomerase activity1.39E-02
33GO:0008017: microtubule binding1.46E-02
34GO:0016762: xyloglucan:xyloglucosyl transferase activity1.54E-02
35GO:0046983: protein dimerization activity1.83E-02
36GO:0016722: oxidoreductase activity, oxidizing metal ions1.84E-02
37GO:0016413: O-acetyltransferase activity1.92E-02
38GO:0016798: hydrolase activity, acting on glycosyl bonds2.24E-02
39GO:0030145: manganese ion binding2.67E-02
40GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.67E-02
41GO:0005507: copper ion binding2.73E-02
42GO:0004871: signal transducer activity3.37E-02
43GO:0004722: protein serine/threonine phosphatase activity3.53E-02
44GO:0044212: transcription regulatory region DNA binding4.22E-02
45GO:0004674: protein serine/threonine kinase activity4.78E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0000791: euchromatin1.56E-04
3GO:0030870: Mre11 complex3.55E-04
4GO:0009569: chloroplast starch grain3.55E-04
5GO:0000795: synaptonemal complex1.40E-03
6GO:0005874: microtubule4.93E-03
7GO:0009508: plastid chromosome5.98E-03
8GO:0005875: microtubule associated complex7.59E-03
9GO:0009504: cell plate1.46E-02
10GO:0000785: chromatin1.61E-02
11GO:0009295: nucleoid1.84E-02
12GO:0046658: anchored component of plasma membrane1.85E-02
13GO:0005667: transcription factor complex2.16E-02
14GO:0090406: pollen tube3.42E-02
15GO:0010008: endosome membrane4.86E-02
<
Gene type



Gene DE type