co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
2	GO:0033198: response to ATP	0.00E+00
3	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
4	GO:1900367: positive regulation of defense response to insect	0.00E+00
5	GO:0002764: immune response-regulating signaling pathway	0.00E+00
6	GO:0033587: shikimate biosynthetic process	0.00E+00
7	GO:0032491: detection of molecule of fungal origin	0.00E+00
8	GO:0009268: response to pH	0.00E+00
9	GO:0032499: detection of peptidoglycan	0.00E+00
10	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
11	GO:0071327: cellular response to trehalose stimulus	0.00E+00
12	GO:0006468: protein phosphorylation	3.96E-08
13	GO:0010200: response to chitin	6.20E-07
14	GO:0080142: regulation of salicylic acid biosynthetic process	1.71E-06
15	GO:0006470: protein dephosphorylation	6.31E-06
16	GO:0009751: response to salicylic acid	2.12E-05
17	GO:0042742: defense response to bacterium	2.46E-05
18	GO:0031348: negative regulation of defense response	3.62E-05
19	GO:0006952: defense response	4.51E-05
20	GO:0033358: UDP-L-arabinose biosynthetic process	1.40E-04
21	GO:0060548: negative regulation of cell death	1.40E-04
22	GO:0045227: capsule polysaccharide biosynthetic process	1.40E-04
23	GO:0006904: vesicle docking involved in exocytosis	1.86E-04
24	GO:0002237: response to molecule of bacterial origin	2.03E-04
25	GO:0009697: salicylic acid biosynthetic process	2.15E-04
26	GO:0046777: protein autophosphorylation	2.49E-04
27	GO:0002238: response to molecule of fungal origin	3.03E-04
28	GO:0009626: plant-type hypersensitive response	3.27E-04
29	GO:0009620: response to fungus	3.46E-04
30	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.69E-04
31	GO:0048482: plant ovule morphogenesis	5.03E-04
32	GO:0010365: positive regulation of ethylene biosynthetic process	5.03E-04
33	GO:0051938: L-glutamate import	5.03E-04
34	GO:0051245: negative regulation of cellular defense response	5.03E-04
35	GO:0019567: arabinose biosynthetic process	5.03E-04
36	GO:0015969: guanosine tetraphosphate metabolic process	5.03E-04
37	GO:0051180: vitamin transport	5.03E-04
38	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	5.03E-04
39	GO:0010941: regulation of cell death	5.03E-04
40	GO:0030974: thiamine pyrophosphate transport	5.03E-04
41	GO:1901183: positive regulation of camalexin biosynthetic process	5.03E-04
42	GO:0019673: GDP-mannose metabolic process	5.03E-04
43	GO:0042759: long-chain fatty acid biosynthetic process	5.03E-04
44	GO:0009867: jasmonic acid mediated signaling pathway	5.17E-04
45	GO:0009611: response to wounding	6.09E-04
46	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.48E-04
47	GO:0035556: intracellular signal transduction	6.59E-04
48	GO:0006887: exocytosis	6.75E-04
49	GO:0010204: defense response signaling pathway, resistance gene-independent	7.90E-04
50	GO:2000031: regulation of salicylic acid mediated signaling pathway	7.90E-04
51	GO:1902066: regulation of cell wall pectin metabolic process	1.08E-03
52	GO:0010115: regulation of abscisic acid biosynthetic process	1.08E-03
53	GO:0043066: negative regulation of apoptotic process	1.08E-03
54	GO:0015865: purine nucleotide transport	1.08E-03
55	GO:0002240: response to molecule of oomycetes origin	1.08E-03
56	GO:0010271: regulation of chlorophyll catabolic process	1.08E-03
57	GO:0031349: positive regulation of defense response	1.08E-03
58	GO:0010541: acropetal auxin transport	1.08E-03
59	GO:0015893: drug transport	1.08E-03
60	GO:0019725: cellular homeostasis	1.08E-03
61	GO:0002221: pattern recognition receptor signaling pathway	1.08E-03
62	GO:0043091: L-arginine import	1.08E-03
63	GO:0046939: nucleotide phosphorylation	1.08E-03
64	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.08E-03
65	GO:0015802: basic amino acid transport	1.08E-03
66	GO:0080185: effector dependent induction by symbiont of host immune response	1.08E-03
67	GO:0010618: aerenchyma formation	1.08E-03
68	GO:0010150: leaf senescence	1.09E-03
69	GO:1900426: positive regulation of defense response to bacterium	1.11E-03
70	GO:0007165: signal transduction	1.12E-03
71	GO:0009737: response to abscisic acid	1.19E-03
72	GO:0009617: response to bacterium	1.48E-03
73	GO:0009816: defense response to bacterium, incompatible interaction	1.76E-03
74	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	1.77E-03
75	GO:0048586: regulation of long-day photoperiodism, flowering	1.77E-03
76	GO:0032922: circadian regulation of gene expression	1.77E-03
77	GO:0010498: proteasomal protein catabolic process	1.77E-03
78	GO:0016045: detection of bacterium	1.77E-03
79	GO:0034051: negative regulation of plant-type hypersensitive response	1.77E-03
80	GO:1900140: regulation of seedling development	1.77E-03
81	GO:0010359: regulation of anion channel activity	1.77E-03
82	GO:1901672: positive regulation of systemic acquired resistance	1.77E-03
83	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.77E-03
84	GO:0051176: positive regulation of sulfur metabolic process	1.77E-03
85	GO:0045836: positive regulation of meiotic nuclear division	1.77E-03
86	GO:0046621: negative regulation of organ growth	1.77E-03
87	GO:0055046: microgametogenesis	1.95E-03
88	GO:0034605: cellular response to heat	2.20E-03
89	GO:0007034: vacuolar transport	2.20E-03
90	GO:0009817: defense response to fungus, incompatible interaction	2.30E-03
91	GO:0009225: nucleotide-sugar metabolic process	2.47E-03
92	GO:0010167: response to nitrate	2.47E-03
93	GO:0070588: calcium ion transmembrane transport	2.47E-03
94	GO:0046902: regulation of mitochondrial membrane permeability	2.57E-03
95	GO:0010306: rhamnogalacturonan II biosynthetic process	2.57E-03
96	GO:0006612: protein targeting to membrane	2.57E-03
97	GO:0010104: regulation of ethylene-activated signaling pathway	2.57E-03
98	GO:0010731: protein glutathionylation	2.57E-03
99	GO:0072583: clathrin-dependent endocytosis	2.57E-03
100	GO:0071323: cellular response to chitin	2.57E-03
101	GO:0006986: response to unfolded protein	2.57E-03
102	GO:0046513: ceramide biosynthetic process	2.57E-03
103	GO:0046836: glycolipid transport	2.57E-03
104	GO:0000187: activation of MAPK activity	2.57E-03
105	GO:0048194: Golgi vesicle budding	2.57E-03
106	GO:0006499: N-terminal protein myristoylation	2.61E-03
107	GO:0006970: response to osmotic stress	2.68E-03
108	GO:0009863: salicylic acid mediated signaling pathway	3.05E-03
109	GO:0046345: abscisic acid catabolic process	3.46E-03
110	GO:0010107: potassium ion import	3.46E-03
111	GO:0010363: regulation of plant-type hypersensitive response	3.46E-03
112	GO:0071219: cellular response to molecule of bacterial origin	3.46E-03
113	GO:0010508: positive regulation of autophagy	3.46E-03
114	GO:0003333: amino acid transmembrane transport	3.71E-03
115	GO:0010017: red or far-red light signaling pathway	4.06E-03
116	GO:0016226: iron-sulfur cluster assembly	4.06E-03
117	GO:0071456: cellular response to hypoxia	4.06E-03
118	GO:0009625: response to insect	4.43E-03
119	GO:0006012: galactose metabolic process	4.43E-03
120	GO:0018344: protein geranylgeranylation	4.44E-03
121	GO:0010225: response to UV-C	4.44E-03
122	GO:0009247: glycolipid biosynthetic process	4.44E-03
123	GO:0045927: positive regulation of growth	4.44E-03
124	GO:0006855: drug transmembrane transport	5.26E-03
125	GO:0048317: seed morphogenesis	5.50E-03
126	GO:1900425: negative regulation of defense response to bacterium	5.50E-03
127	GO:0010337: regulation of salicylic acid metabolic process	5.50E-03
128	GO:0018258: protein O-linked glycosylation via hydroxyproline	5.50E-03
129	GO:0010942: positive regulation of cell death	5.50E-03
130	GO:0010405: arabinogalactan protein metabolic process	5.50E-03
131	GO:0006486: protein glycosylation	6.33E-03
132	GO:0009409: response to cold	6.42E-03
133	GO:0045926: negative regulation of growth	6.63E-03
134	GO:0009423: chorismate biosynthetic process	6.63E-03
135	GO:0031930: mitochondria-nucleus signaling pathway	6.63E-03
136	GO:2000037: regulation of stomatal complex patterning	6.63E-03
137	GO:0010310: regulation of hydrogen peroxide metabolic process	6.63E-03
138	GO:0009408: response to heat	6.82E-03
139	GO:0010193: response to ozone	7.54E-03
140	GO:0071446: cellular response to salicylic acid stimulus	7.85E-03
141	GO:1900056: negative regulation of leaf senescence	7.85E-03
142	GO:0070370: cellular heat acclimation	7.85E-03
143	GO:0010161: red light signaling pathway	7.85E-03
144	GO:0019375: galactolipid biosynthetic process	9.14E-03
145	GO:0030162: regulation of proteolysis	9.14E-03
146	GO:0006491: N-glycan processing	9.14E-03
147	GO:0032875: regulation of DNA endoreduplication	9.14E-03
148	GO:0045010: actin nucleation	9.14E-03
149	GO:0018105: peptidyl-serine phosphorylation	1.03E-02
150	GO:0010099: regulation of photomorphogenesis	1.05E-02
151	GO:0009932: cell tip growth	1.05E-02
152	GO:0030968: endoplasmic reticulum unfolded protein response	1.05E-02
153	GO:0001666: response to hypoxia	1.10E-02
154	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.16E-02
155	GO:0009051: pentose-phosphate shunt, oxidative branch	1.19E-02
156	GO:0006098: pentose-phosphate shunt	1.19E-02
157	GO:0090333: regulation of stomatal closure	1.19E-02
158	GO:0046916: cellular transition metal ion homeostasis	1.19E-02
159	GO:0010112: regulation of systemic acquired resistance	1.19E-02
160	GO:0009060: aerobic respiration	1.19E-02
161	GO:0009627: systemic acquired resistance	1.22E-02
162	GO:0048268: clathrin coat assembly	1.34E-02
163	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.34E-02
164	GO:0010380: regulation of chlorophyll biosynthetic process	1.34E-02
165	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.34E-02
166	GO:0006032: chitin catabolic process	1.50E-02
167	GO:0043069: negative regulation of programmed cell death	1.50E-02
168	GO:0048527: lateral root development	1.66E-02
169	GO:0010119: regulation of stomatal movement	1.66E-02
170	GO:0009073: aromatic amino acid family biosynthetic process	1.66E-02
171	GO:0050832: defense response to fungus	1.72E-02
172	GO:0045087: innate immune response	1.82E-02
173	GO:0008361: regulation of cell size	1.83E-02
174	GO:0015706: nitrate transport	1.83E-02
175	GO:0002213: defense response to insect	1.83E-02
176	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.83E-02
177	GO:0016925: protein sumoylation	1.83E-02
178	GO:0006626: protein targeting to mitochondrion	2.01E-02
179	GO:0009785: blue light signaling pathway	2.01E-02
180	GO:0006006: glucose metabolic process	2.01E-02
181	GO:2000028: regulation of photoperiodism, flowering	2.01E-02
182	GO:0010229: inflorescence development	2.01E-02
183	GO:0018107: peptidyl-threonine phosphorylation	2.01E-02
184	GO:0009266: response to temperature stimulus	2.18E-02
185	GO:0009414: response to water deprivation	2.24E-02
186	GO:0051707: response to other organism	2.35E-02
187	GO:0007166: cell surface receptor signaling pathway	2.36E-02
188	GO:0010053: root epidermal cell differentiation	2.37E-02
189	GO:0034976: response to endoplasmic reticulum stress	2.56E-02
190	GO:0009753: response to jasmonic acid	2.56E-02
191	GO:0006487: protein N-linked glycosylation	2.76E-02
192	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.85E-02
193	GO:0009695: jasmonic acid biosynthetic process	2.96E-02
194	GO:0009269: response to desiccation	3.16E-02
195	GO:0048278: vesicle docking	3.16E-02
196	GO:0051321: meiotic cell cycle	3.16E-02
197	GO:0016998: cell wall macromolecule catabolic process	3.16E-02
198	GO:0009809: lignin biosynthetic process	3.17E-02
199	GO:0009873: ethylene-activated signaling pathway	3.35E-02
200	GO:0009814: defense response, incompatible interaction	3.38E-02
201	GO:0009909: regulation of flower development	3.51E-02
202	GO:0010227: floral organ abscission	3.59E-02
203	GO:0019722: calcium-mediated signaling	3.81E-02
204	GO:0009561: megagametogenesis	3.81E-02
205	GO:0009306: protein secretion	3.81E-02
206	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.04E-02
207	GO:0042631: cellular response to water deprivation	4.27E-02
208	GO:0042391: regulation of membrane potential	4.27E-02
209	GO:0010118: stomatal movement	4.27E-02
210	GO:0006885: regulation of pH	4.50E-02
211	GO:0009646: response to absence of light	4.73E-02
212	GO:0048544: recognition of pollen	4.73E-02
213	GO:0061025: membrane fusion	4.73E-02
214	GO:0009749: response to glucose	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005522: profilin binding	0.00E+00
2	GO:0004107: chorismate synthase activity	0.00E+00
3	GO:0005212: structural constituent of eye lens	0.00E+00
4	GO:2001080: chitosan binding	0.00E+00
5	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
6	GO:0016301: kinase activity	7.26E-08
7	GO:0004674: protein serine/threonine kinase activity	3.46E-07
8	GO:0005524: ATP binding	9.96E-07
9	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.78E-06
10	GO:0005515: protein binding	5.91E-05
11	GO:0004722: protein serine/threonine phosphatase activity	8.83E-05
12	GO:0019199: transmembrane receptor protein kinase activity	1.40E-04
13	GO:0050373: UDP-arabinose 4-epimerase activity	1.40E-04
14	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.70E-04
15	GO:0005509: calcium ion binding	2.86E-04
16	GO:0004672: protein kinase activity	3.89E-04
17	GO:0004012: phospholipid-translocating ATPase activity	4.05E-04
18	GO:0003978: UDP-glucose 4-epimerase activity	4.05E-04
19	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	5.03E-04
20	GO:1901149: salicylic acid binding	5.03E-04
21	GO:0090422: thiamine pyrophosphate transporter activity	5.03E-04
22	GO:0004662: CAAX-protein geranylgeranyltransferase activity	5.03E-04
23	GO:0015085: calcium ion transmembrane transporter activity	5.03E-04
24	GO:0008446: GDP-mannose 4,6-dehydratase activity	5.03E-04
25	GO:0046481: digalactosyldiacylglycerol synthase activity	5.03E-04
26	GO:0032050: clathrin heavy chain binding	5.03E-04
27	GO:0019901: protein kinase binding	9.44E-04
28	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.62E-04
29	GO:0008728: GTP diphosphokinase activity	1.08E-03
30	GO:0048531: beta-1,3-galactosyltransferase activity	1.08E-03
31	GO:0050291: sphingosine N-acyltransferase activity	1.08E-03
32	GO:0004568: chitinase activity	1.29E-03
33	GO:0008559: xenobiotic-transporting ATPase activity	1.50E-03
34	GO:0016174: NAD(P)H oxidase activity	1.77E-03
35	GO:0046423: allene-oxide cyclase activity	1.77E-03
36	GO:0019948: SUMO activating enzyme activity	1.77E-03
37	GO:0005388: calcium-transporting ATPase activity	1.95E-03
38	GO:0015238: drug transmembrane transporter activity	2.46E-03
39	GO:0004190: aspartic-type endopeptidase activity	2.47E-03
40	GO:0015189: L-lysine transmembrane transporter activity	2.57E-03
41	GO:0017089: glycolipid transporter activity	2.57E-03
42	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	2.57E-03
43	GO:0019201: nucleotide kinase activity	2.57E-03
44	GO:0035250: UDP-galactosyltransferase activity	2.57E-03
45	GO:0015181: arginine transmembrane transporter activity	2.57E-03
46	GO:0043531: ADP binding	2.77E-03
47	GO:0043424: protein histidine kinase binding	3.37E-03
48	GO:0005313: L-glutamate transmembrane transporter activity	3.46E-03
49	GO:0004345: glucose-6-phosphate dehydrogenase activity	3.46E-03
50	GO:0051861: glycolipid binding	3.46E-03
51	GO:0033612: receptor serine/threonine kinase binding	3.71E-03
52	GO:0010294: abscisic acid glucosyltransferase activity	4.44E-03
53	GO:0004040: amidase activity	4.44E-03
54	GO:0005471: ATP:ADP antiporter activity	4.44E-03
55	GO:0045431: flavonol synthase activity	4.44E-03
56	GO:1990714: hydroxyproline O-galactosyltransferase activity	5.50E-03
57	GO:0035252: UDP-xylosyltransferase activity	5.50E-03
58	GO:0005525: GTP binding	5.60E-03
59	GO:0004017: adenylate kinase activity	6.63E-03
60	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	6.63E-03
61	GO:0019900: kinase binding	6.63E-03
62	GO:0004559: alpha-mannosidase activity	6.63E-03
63	GO:0004842: ubiquitin-protein transferase activity	6.74E-03
64	GO:0031625: ubiquitin protein ligase binding	7.21E-03
65	GO:0052747: sinapyl alcohol dehydrogenase activity	9.14E-03
66	GO:0004708: MAP kinase kinase activity	9.14E-03
67	GO:0004714: transmembrane receptor protein tyrosine kinase activity	9.14E-03
68	GO:0008271: secondary active sulfate transmembrane transporter activity	1.05E-02
69	GO:0071949: FAD binding	1.19E-02
70	GO:0008375: acetylglucosaminyltransferase activity	1.22E-02
71	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.22E-02
72	GO:0046872: metal ion binding	1.27E-02
73	GO:0004806: triglyceride lipase activity	1.29E-02
74	GO:0004721: phosphoprotein phosphatase activity	1.29E-02
75	GO:0004683: calmodulin-dependent protein kinase activity	1.29E-02
76	GO:0005516: calmodulin binding	1.33E-02
77	GO:0015174: basic amino acid transmembrane transporter activity	1.34E-02
78	GO:0015112: nitrate transmembrane transporter activity	1.34E-02
79	GO:0043565: sequence-specific DNA binding	1.48E-02
80	GO:0008047: enzyme activator activity	1.50E-02
81	GO:0004713: protein tyrosine kinase activity	1.50E-02
82	GO:0005545: 1-phosphatidylinositol binding	1.50E-02
83	GO:0005543: phospholipid binding	1.66E-02
84	GO:0015116: sulfate transmembrane transporter activity	1.83E-02
85	GO:0008378: galactosyltransferase activity	1.83E-02
86	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.83E-02
87	GO:0015297: antiporter activity	1.88E-02
88	GO:0031072: heat shock protein binding	2.01E-02
89	GO:0030553: cGMP binding	2.37E-02
90	GO:0008061: chitin binding	2.37E-02
91	GO:0030552: cAMP binding	2.37E-02
92	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.70E-02
93	GO:0003954: NADH dehydrogenase activity	2.76E-02
94	GO:0043130: ubiquitin binding	2.76E-02
95	GO:0005215: transporter activity	2.83E-02
96	GO:0005216: ion channel activity	2.96E-02
97	GO:0004707: MAP kinase activity	3.16E-02
98	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.16E-02
99	GO:0016298: lipase activity	3.28E-02
100	GO:0000287: magnesium ion binding	3.37E-02
101	GO:0015171: amino acid transmembrane transporter activity	3.51E-02
102	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.87E-02
103	GO:0030551: cyclic nucleotide binding	4.27E-02
104	GO:0005451: monovalent cation:proton antiporter activity	4.27E-02
105	GO:0005249: voltage-gated potassium channel activity	4.27E-02
106	GO:0030276: clathrin binding	4.50E-02
107	GO:0015299: solute:proton antiporter activity	4.73E-02
108	GO:0010181: FMN binding	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	4.26E-12
2	GO:0016021: integral component of membrane	4.39E-04
3	GO:0005911: cell-cell junction	5.03E-04
4	GO:0005953: CAAX-protein geranylgeranyltransferase complex	5.03E-04
5	GO:0031304: intrinsic component of mitochondrial inner membrane	1.08E-03
6	GO:0005901: caveola	1.08E-03
7	GO:0000145: exocyst	1.12E-03
8	GO:0008287: protein serine/threonine phosphatase complex	1.77E-03
9	GO:0030139: endocytic vesicle	1.77E-03
10	GO:0070062: extracellular exosome	2.57E-03
11	GO:0000815: ESCRT III complex	6.63E-03
12	GO:0032580: Golgi cisterna membrane	9.16E-03
13	GO:0005887: integral component of plasma membrane	1.16E-02
14	GO:0005794: Golgi apparatus	1.39E-02
15	GO:0005740: mitochondrial envelope	1.50E-02
16	GO:0030125: clathrin vesicle coat	1.50E-02
17	GO:0090404: pollen tube tip	1.66E-02
18	GO:0000325: plant-type vacuole	1.66E-02
19	GO:0048471: perinuclear region of cytoplasm	1.66E-02
20	GO:0090406: pollen tube	2.35E-02
21	GO:0005795: Golgi stack	2.37E-02
22	GO:0005758: mitochondrial intermembrane space	2.76E-02
23	GO:0005737: cytoplasm	3.10E-02
24	GO:0005905: clathrin-coated pit	3.16E-02
25	GO:0005635: nuclear envelope	3.39E-02
26	GO:0030136: clathrin-coated vesicle	4.04E-02
27	GO:0012505: endomembrane system	4.37E-02
28	GO:0005770: late endosome	4.50E-02
29	GO:0009504: cell plate	4.97E-02
30	GO:0005768: endosome	4.99E-02