Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045730: respiratory burst0.00E+00
2GO:0010324: membrane invagination0.00E+00
3GO:0032499: detection of peptidoglycan0.00E+00
4GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
7GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
8GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
9GO:0015690: aluminum cation transport0.00E+00
10GO:1900367: positive regulation of defense response to insect0.00E+00
11GO:0002764: immune response-regulating signaling pathway0.00E+00
12GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
13GO:0033587: shikimate biosynthetic process0.00E+00
14GO:0006468: protein phosphorylation1.85E-08
15GO:0031348: negative regulation of defense response1.19E-06
16GO:0080142: regulation of salicylic acid biosynthetic process1.49E-06
17GO:0060548: negative regulation of cell death1.49E-06
18GO:0006952: defense response2.03E-06
19GO:0010150: leaf senescence2.90E-06
20GO:0009697: salicylic acid biosynthetic process3.31E-06
21GO:0019725: cellular homeostasis1.01E-05
22GO:0010200: response to chitin3.27E-05
23GO:0045088: regulation of innate immune response1.29E-04
24GO:0009266: response to temperature stimulus1.82E-04
25GO:0010225: response to UV-C1.98E-04
26GO:0046777: protein autophosphorylation2.06E-04
27GO:0070588: calcium ion transmembrane transport2.15E-04
28GO:0009816: defense response to bacterium, incompatible interaction2.20E-04
29GO:0006470: protein dephosphorylation2.61E-04
30GO:0006979: response to oxidative stress2.95E-04
31GO:0042372: phylloquinone biosynthetic process3.75E-04
32GO:0071456: cellular response to hypoxia4.24E-04
33GO:0009751: response to salicylic acid4.32E-04
34GO:0042759: long-chain fatty acid biosynthetic process4.78E-04
35GO:0048508: embryonic meristem development4.78E-04
36GO:0051938: L-glutamate import4.78E-04
37GO:0015760: glucose-6-phosphate transport4.78E-04
38GO:0046256: 2,4,6-trinitrotoluene catabolic process4.78E-04
39GO:0019567: arabinose biosynthetic process4.78E-04
40GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.78E-04
41GO:0010421: hydrogen peroxide-mediated programmed cell death4.78E-04
42GO:0007229: integrin-mediated signaling pathway4.78E-04
43GO:1901183: positive regulation of camalexin biosynthetic process4.78E-04
44GO:0009270: response to humidity4.78E-04
45GO:0006643: membrane lipid metabolic process4.78E-04
46GO:0032491: detection of molecule of fungal origin4.78E-04
47GO:0042391: regulation of membrane potential6.51E-04
48GO:0051707: response to other organism6.78E-04
49GO:2000031: regulation of salicylic acid mediated signaling pathway7.33E-04
50GO:0009646: response to absence of light7.86E-04
51GO:0006098: pentose-phosphate shunt8.76E-04
52GO:0090333: regulation of stomatal closure8.76E-04
53GO:0010112: regulation of systemic acquired resistance8.76E-04
54GO:0042742: defense response to bacterium8.93E-04
55GO:0002221: pattern recognition receptor signaling pathway1.03E-03
56GO:0043091: L-arginine import1.03E-03
57GO:0015914: phospholipid transport1.03E-03
58GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.03E-03
59GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.03E-03
60GO:0015802: basic amino acid transport1.03E-03
61GO:0010618: aerenchyma formation1.03E-03
62GO:0010115: regulation of abscisic acid biosynthetic process1.03E-03
63GO:0044419: interspecies interaction between organisms1.03E-03
64GO:0010271: regulation of chlorophyll catabolic process1.03E-03
65GO:0009945: radial axis specification1.03E-03
66GO:0015712: hexose phosphate transport1.03E-03
67GO:0006486: protein glycosylation1.07E-03
68GO:0009626: plant-type hypersensitive response1.51E-03
69GO:0009620: response to fungus1.59E-03
70GO:0009611: response to wounding1.67E-03
71GO:0051176: positive regulation of sulfur metabolic process1.68E-03
72GO:0045793: positive regulation of cell size1.68E-03
73GO:0010186: positive regulation of cellular defense response1.68E-03
74GO:0048281: inflorescence morphogenesis1.68E-03
75GO:0015714: phosphoenolpyruvate transport1.68E-03
76GO:1900055: regulation of leaf senescence1.68E-03
77GO:0006954: inflammatory response1.68E-03
78GO:0010498: proteasomal protein catabolic process1.68E-03
79GO:0034051: negative regulation of plant-type hypersensitive response1.68E-03
80GO:0016045: detection of bacterium1.68E-03
81GO:1900140: regulation of seedling development1.68E-03
82GO:0010359: regulation of anion channel activity1.68E-03
83GO:0035436: triose phosphate transmembrane transport1.68E-03
84GO:0055046: microgametogenesis1.80E-03
85GO:0010167: response to nitrate2.28E-03
86GO:0007165: signal transduction2.31E-03
87GO:0046513: ceramide biosynthetic process2.44E-03
88GO:0046836: glycolipid transport2.44E-03
89GO:0048194: Golgi vesicle budding2.44E-03
90GO:0010306: rhamnogalacturonan II biosynthetic process2.44E-03
91GO:0009399: nitrogen fixation2.44E-03
92GO:0072583: clathrin-dependent endocytosis2.44E-03
93GO:0071323: cellular response to chitin2.44E-03
94GO:0051289: protein homotetramerization2.44E-03
95GO:0002679: respiratory burst involved in defense response2.44E-03
96GO:0010119: regulation of stomatal movement2.51E-03
97GO:2000377: regulation of reactive oxygen species metabolic process2.82E-03
98GO:0009867: jasmonic acid mediated signaling pathway2.83E-03
99GO:0006542: glutamine biosynthetic process3.28E-03
100GO:1901141: regulation of lignin biosynthetic process3.28E-03
101GO:0010109: regulation of photosynthesis3.28E-03
102GO:0045227: capsule polysaccharide biosynthetic process3.28E-03
103GO:0010483: pollen tube reception3.28E-03
104GO:0009652: thigmotropism3.28E-03
105GO:0033358: UDP-L-arabinose biosynthetic process3.28E-03
106GO:0010107: potassium ion import3.28E-03
107GO:0071219: cellular response to molecule of bacterial origin3.28E-03
108GO:0010508: positive regulation of autophagy3.28E-03
109GO:0015713: phosphoglycerate transport3.28E-03
110GO:0010017: red or far-red light signaling pathway3.76E-03
111GO:0016226: iron-sulfur cluster assembly3.76E-03
112GO:0009625: response to insect4.10E-03
113GO:0034052: positive regulation of plant-type hypersensitive response4.21E-03
114GO:0009164: nucleoside catabolic process4.21E-03
115GO:0002238: response to molecule of fungal origin5.21E-03
116GO:0009643: photosynthetic acclimation5.21E-03
117GO:0010942: positive regulation of cell death5.21E-03
118GO:0010405: arabinogalactan protein metabolic process5.21E-03
119GO:1900425: negative regulation of defense response to bacterium5.21E-03
120GO:0018258: protein O-linked glycosylation via hydroxyproline5.21E-03
121GO:0006574: valine catabolic process5.21E-03
122GO:0010118: stomatal movement5.23E-03
123GO:0009617: response to bacterium5.53E-03
124GO:0009809: lignin biosynthetic process5.73E-03
125GO:0050832: defense response to fungus6.07E-03
126GO:0010310: regulation of hydrogen peroxide metabolic process6.28E-03
127GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response6.28E-03
128GO:0009612: response to mechanical stimulus6.28E-03
129GO:0009942: longitudinal axis specification6.28E-03
130GO:0009423: chorismate biosynthetic process6.28E-03
131GO:0009749: response to glucose6.51E-03
132GO:0010193: response to ozone6.97E-03
133GO:0010044: response to aluminum ion7.43E-03
134GO:0010161: red light signaling pathway7.43E-03
135GO:0098869: cellular oxidant detoxification7.43E-03
136GO:0046470: phosphatidylcholine metabolic process7.43E-03
137GO:0071446: cellular response to salicylic acid stimulus7.43E-03
138GO:1900056: negative regulation of leaf senescence7.43E-03
139GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c7.43E-03
140GO:0050829: defense response to Gram-negative bacterium7.43E-03
141GO:0030091: protein repair8.65E-03
142GO:0009787: regulation of abscisic acid-activated signaling pathway8.65E-03
143GO:0009819: drought recovery8.65E-03
144GO:0009624: response to nematode9.00E-03
145GO:0030968: endoplasmic reticulum unfolded protein response9.94E-03
146GO:0009808: lignin metabolic process9.94E-03
147GO:0010099: regulation of photomorphogenesis9.94E-03
148GO:0010204: defense response signaling pathway, resistance gene-independent9.94E-03
149GO:0001666: response to hypoxia1.01E-02
150GO:0009627: systemic acquired resistance1.13E-02
151GO:0042128: nitrate assimilation1.13E-02
152GO:0009051: pentose-phosphate shunt, oxidative branch1.13E-02
153GO:0051865: protein autoubiquitination1.13E-02
154GO:0046916: cellular transition metal ion homeostasis1.13E-02
155GO:0006950: response to stress1.19E-02
156GO:1900426: positive regulation of defense response to bacterium1.27E-02
157GO:0048354: mucilage biosynthetic process involved in seed coat development1.27E-02
158GO:0010380: regulation of chlorophyll biosynthetic process1.27E-02
159GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.27E-02
160GO:0009832: plant-type cell wall biogenesis1.39E-02
161GO:0007064: mitotic sister chromatid cohesion1.42E-02
162GO:0009407: toxin catabolic process1.46E-02
163GO:0009738: abscisic acid-activated signaling pathway1.52E-02
164GO:0007568: aging1.53E-02
165GO:0009073: aromatic amino acid family biosynthetic process1.57E-02
166GO:0045087: innate immune response1.68E-02
167GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.73E-02
168GO:0008361: regulation of cell size1.73E-02
169GO:0012501: programmed cell death1.73E-02
170GO:0015706: nitrate transport1.73E-02
171GO:0002213: defense response to insect1.73E-02
172GO:0010105: negative regulation of ethylene-activated signaling pathway1.73E-02
173GO:0035556: intracellular signal transduction1.77E-02
174GO:0006006: glucose metabolic process1.90E-02
175GO:0009785: blue light signaling pathway1.90E-02
176GO:0010540: basipetal auxin transport2.07E-02
177GO:0002237: response to molecule of bacterial origin2.07E-02
178GO:0007034: vacuolar transport2.07E-02
179GO:0007166: cell surface receptor signaling pathway2.14E-02
180GO:0009744: response to sucrose2.17E-02
181GO:0046854: phosphatidylinositol phosphorylation2.24E-02
182GO:0009969: xyloglucan biosynthetic process2.24E-02
183GO:0009225: nucleotide-sugar metabolic process2.24E-02
184GO:0009636: response to toxic substance2.45E-02
185GO:0006855: drug transmembrane transport2.54E-02
186GO:0006487: protein N-linked glycosylation2.61E-02
187GO:0009863: salicylic acid mediated signaling pathway2.61E-02
188GO:0048511: rhythmic process2.99E-02
189GO:0009269: response to desiccation2.99E-02
190GO:0003333: amino acid transmembrane transport2.99E-02
191GO:2000022: regulation of jasmonic acid mediated signaling pathway3.19E-02
192GO:0009909: regulation of flower development3.25E-02
193GO:0016567: protein ubiquitination3.37E-02
194GO:0006012: galactose metabolic process3.40E-02
195GO:0009409: response to cold3.56E-02
196GO:0009737: response to abscisic acid3.59E-02
197GO:0019722: calcium-mediated signaling3.60E-02
198GO:0009561: megagametogenesis3.60E-02
199GO:0070417: cellular response to cold3.82E-02
200GO:0042147: retrograde transport, endosome to Golgi3.82E-02
201GO:0042631: cellular response to water deprivation4.03E-02
202GO:0000271: polysaccharide biosynthetic process4.03E-02
203GO:0010197: polar nucleus fusion4.25E-02
204GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.25E-02
205GO:0006885: regulation of pH4.25E-02
206GO:0045489: pectin biosynthetic process4.25E-02
207GO:0009742: brassinosteroid mediated signaling pathway4.41E-02
208GO:0008654: phospholipid biosynthetic process4.71E-02
209GO:0000302: response to reactive oxygen species4.94E-02
210GO:0002229: defense response to oomycetes4.94E-02
211GO:0006891: intra-Golgi vesicle-mediated transport4.94E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0004107: chorismate synthase activity0.00E+00
3GO:2001080: chitosan binding0.00E+00
4GO:0016301: kinase activity7.61E-09
5GO:0004674: protein serine/threonine kinase activity3.69E-08
6GO:0005524: ATP binding6.22E-06
7GO:0019199: transmembrane receptor protein kinase activity1.29E-04
8GO:0005388: calcium-transporting ATPase activity1.53E-04
9GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.98E-04
10GO:0030552: cAMP binding2.15E-04
11GO:0030553: cGMP binding2.15E-04
12GO:0005509: calcium ion binding2.24E-04
13GO:0005216: ion channel activity3.32E-04
14GO:0004012: phospholipid-translocating ATPase activity3.75E-04
15GO:0031127: alpha-(1,2)-fucosyltransferase activity4.78E-04
16GO:0032050: clathrin heavy chain binding4.78E-04
17GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.78E-04
18GO:0015085: calcium ion transmembrane transporter activity4.78E-04
19GO:0008909: isochorismate synthase activity4.78E-04
20GO:0019707: protein-cysteine S-acyltransferase activity4.78E-04
21GO:0005249: voltage-gated potassium channel activity6.51E-04
22GO:0030551: cyclic nucleotide binding6.51E-04
23GO:0019901: protein kinase binding8.59E-04
24GO:0050291: sphingosine N-acyltransferase activity1.03E-03
25GO:0047364: desulfoglucosinolate sulfotransferase activity1.03E-03
26GO:0015152: glucose-6-phosphate transmembrane transporter activity1.03E-03
27GO:0022821: potassium ion antiporter activity1.03E-03
28GO:0001671: ATPase activator activity1.03E-03
29GO:0048531: beta-1,3-galactosyltransferase activity1.03E-03
30GO:0008171: O-methyltransferase activity1.20E-03
31GO:0005516: calmodulin binding1.28E-03
32GO:0004722: protein serine/threonine phosphatase activity1.31E-03
33GO:0008559: xenobiotic-transporting ATPase activity1.39E-03
34GO:0071917: triose-phosphate transmembrane transporter activity1.68E-03
35GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.68E-03
36GO:0042409: caffeoyl-CoA O-methyltransferase activity1.68E-03
37GO:0005515: protein binding1.77E-03
38GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.80E-03
39GO:0004842: ubiquitin-protein transferase activity2.06E-03
40GO:0004190: aspartic-type endopeptidase activity2.28E-03
41GO:0015189: L-lysine transmembrane transporter activity2.44E-03
42GO:0017089: glycolipid transporter activity2.44E-03
43GO:0015181: arginine transmembrane transporter activity2.44E-03
44GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.44E-03
45GO:0043424: protein histidine kinase binding3.12E-03
46GO:0015120: phosphoglycerate transmembrane transporter activity3.28E-03
47GO:0050373: UDP-arabinose 4-epimerase activity3.28E-03
48GO:0004345: glucose-6-phosphate dehydrogenase activity3.28E-03
49GO:0051861: glycolipid binding3.28E-03
50GO:0005313: L-glutamate transmembrane transporter activity3.28E-03
51GO:0019706: protein-cysteine S-palmitoyltransferase activity3.43E-03
52GO:0033612: receptor serine/threonine kinase binding3.43E-03
53GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.80E-03
54GO:0047631: ADP-ribose diphosphatase activity4.21E-03
55GO:0004356: glutamate-ammonia ligase activity4.21E-03
56GO:0045431: flavonol synthase activity4.21E-03
57GO:0005546: phosphatidylinositol-4,5-bisphosphate binding4.21E-03
58GO:0004605: phosphatidate cytidylyltransferase activity5.21E-03
59GO:1990714: hydroxyproline O-galactosyltransferase activity5.21E-03
60GO:0000210: NAD+ diphosphatase activity5.21E-03
61GO:0035252: UDP-xylosyltransferase activity5.21E-03
62GO:0010181: FMN binding6.06E-03
63GO:0019900: kinase binding6.28E-03
64GO:0033743: peptide-methionine (R)-S-oxide reductase activity6.28E-03
65GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides6.28E-03
66GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.28E-03
67GO:0005261: cation channel activity6.28E-03
68GO:0003978: UDP-glucose 4-epimerase activity6.28E-03
69GO:0004672: protein kinase activity6.46E-03
70GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity7.43E-03
71GO:0043295: glutathione binding7.43E-03
72GO:0004714: transmembrane receptor protein tyrosine kinase activity8.65E-03
73GO:0005544: calcium-dependent phospholipid binding8.65E-03
74GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.00E-03
75GO:0043531: ADP binding9.46E-03
76GO:0004630: phospholipase D activity9.94E-03
77GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity9.94E-03
78GO:0004430: 1-phosphatidylinositol 4-kinase activity9.94E-03
79GO:0008417: fucosyltransferase activity1.13E-02
80GO:0008375: acetylglucosaminyltransferase activity1.13E-02
81GO:0004806: triglyceride lipase activity1.19E-02
82GO:0004721: phosphoprotein phosphatase activity1.19E-02
83GO:0047617: acyl-CoA hydrolase activity1.27E-02
84GO:0015112: nitrate transmembrane transporter activity1.27E-02
85GO:0015174: basic amino acid transmembrane transporter activity1.27E-02
86GO:0015238: drug transmembrane transporter activity1.39E-02
87GO:0004568: chitinase activity1.42E-02
88GO:0008047: enzyme activator activity1.42E-02
89GO:0046872: metal ion binding1.57E-02
90GO:0005543: phospholipid binding1.57E-02
91GO:0015297: antiporter activity1.70E-02
92GO:0008378: galactosyltransferase activity1.73E-02
93GO:0004521: endoribonuclease activity1.73E-02
94GO:0005315: inorganic phosphate transmembrane transporter activity1.90E-02
95GO:0015095: magnesium ion transmembrane transporter activity1.90E-02
96GO:0004364: glutathione transferase activity2.09E-02
97GO:0008061: chitin binding2.24E-02
98GO:0008146: sulfotransferase activity2.24E-02
99GO:0009055: electron carrier activity2.28E-02
100GO:0003954: NADH dehydrogenase activity2.61E-02
101GO:0030246: carbohydrate binding2.67E-02
102GO:0051087: chaperone binding2.80E-02
103GO:0004707: MAP kinase activity2.99E-02
104GO:0016298: lipase activity3.04E-02
105GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.19E-02
106GO:0005451: monovalent cation:proton antiporter activity4.03E-02
107GO:0015299: solute:proton antiporter activity4.48E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane5.06E-14
2GO:0016021: integral component of membrane9.66E-07
3GO:0005901: caveola1.01E-05
4GO:0000138: Golgi trans cisterna4.78E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane1.03E-03
6GO:0042406: extrinsic component of endoplasmic reticulum membrane1.68E-03
7GO:0008287: protein serine/threonine phosphatase complex1.68E-03
8GO:0030139: endocytic vesicle1.68E-03
9GO:0070062: extracellular exosome2.44E-03
10GO:0005769: early endosome2.55E-03
11GO:0005758: mitochondrial intermembrane space2.82E-03
12GO:0005887: integral component of plasma membrane3.04E-03
13GO:0032580: Golgi cisterna membrane8.47E-03
14GO:0005794: Golgi apparatus1.04E-02
15GO:0030125: clathrin vesicle coat1.42E-02
16GO:0000325: plant-type vacuole1.53E-02
17GO:0005737: cytoplasm1.84E-02
18GO:0031012: extracellular matrix1.90E-02
19GO:0031902: late endosome membrane2.00E-02
20GO:0030176: integral component of endoplasmic reticulum membrane2.24E-02
21GO:0070469: respiratory chain2.80E-02
22GO:0009536: plastid2.97E-02
23GO:0000139: Golgi membrane3.56E-02
24GO:0005770: late endosome4.25E-02
25GO:0005774: vacuolar membrane4.45E-02
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Gene type



Gene DE type