co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46225

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015871: choline transport	0.00E+00
2	GO:0098586: cellular response to virus	0.00E+00
3	GO:0017009: protein-phycocyanobilin linkage	0.00E+00
4	GO:0006114: glycerol biosynthetic process	0.00E+00
5	GO:0042547: cell wall modification involved in multidimensional cell growth	3.50E-05
6	GO:0043087: regulation of GTPase activity	3.50E-05
7	GO:0090351: seedling development	5.82E-05
8	GO:0043255: regulation of carbohydrate biosynthetic process	8.78E-05
9	GO:0046741: transport of virus in host, tissue to tissue	8.78E-05
10	GO:0000256: allantoin catabolic process	8.78E-05
11	GO:0090603: sieve element differentiation	8.78E-05
12	GO:0006435: threonyl-tRNA aminoacylation	8.78E-05
13	GO:0010136: ureide catabolic process	1.52E-04
14	GO:0009663: plasmodesma organization	1.52E-04
15	GO:0043572: plastid fission	2.25E-04
16	GO:0006145: purine nucleobase catabolic process	2.25E-04
17	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.25E-04
18	GO:0010088: phloem development	2.25E-04
19	GO:0051322: anaphase	3.05E-04
20	GO:0071483: cellular response to blue light	3.05E-04
21	GO:0010337: regulation of salicylic acid metabolic process	4.78E-04
22	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.78E-04
23	GO:0048564: photosystem I assembly	7.68E-04
24	GO:0009932: cell tip growth	8.71E-04
25	GO:0071482: cellular response to light stimulus	8.71E-04
26	GO:0022900: electron transport chain	8.71E-04
27	GO:0009821: alkaloid biosynthetic process	9.78E-04
28	GO:0006032: chitin catabolic process	1.20E-03
29	GO:0006352: DNA-templated transcription, initiation	1.32E-03
30	GO:0009767: photosynthetic electron transport chain	1.57E-03
31	GO:0010207: photosystem II assembly	1.70E-03
32	GO:0010020: chloroplast fission	1.70E-03
33	GO:0009825: multidimensional cell growth	1.84E-03
34	GO:0010167: response to nitrate	1.84E-03
35	GO:0010053: root epidermal cell differentiation	1.84E-03
36	GO:0051302: regulation of cell division	2.26E-03
37	GO:0006825: copper ion transport	2.26E-03
38	GO:0016998: cell wall macromolecule catabolic process	2.41E-03
39	GO:0009814: defense response, incompatible interaction	2.56E-03
40	GO:0016226: iron-sulfur cluster assembly	2.56E-03
41	GO:0031348: negative regulation of defense response	2.56E-03
42	GO:0080092: regulation of pollen tube growth	2.56E-03
43	GO:0006730: one-carbon metabolic process	2.56E-03
44	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.03E-03
45	GO:0010051: xylem and phloem pattern formation	3.20E-03
46	GO:0010197: polar nucleus fusion	3.36E-03
47	GO:0007059: chromosome segregation	3.53E-03
48	GO:0007018: microtubule-based movement	3.53E-03
49	GO:0000302: response to reactive oxygen species	3.88E-03
50	GO:0071554: cell wall organization or biogenesis	3.88E-03
51	GO:0016032: viral process	4.06E-03
52	GO:0000910: cytokinesis	4.80E-03
53	GO:0016311: dephosphorylation	5.78E-03
54	GO:0030244: cellulose biosynthetic process	5.99E-03
55	GO:0009873: ethylene-activated signaling pathway	7.01E-03
56	GO:0045087: innate immune response	7.05E-03
57	GO:0009853: photorespiration	7.05E-03
58	GO:0009809: lignin biosynthetic process	1.04E-02
59	GO:0009058: biosynthetic process	1.62E-02
60	GO:0006413: translational initiation	1.86E-02
61	GO:0045490: pectin catabolic process	1.96E-02
62	GO:0007166: cell surface receptor signaling pathway	2.15E-02
63	GO:0015031: protein transport	2.49E-02
64	GO:0009658: chloroplast organization	2.67E-02
65	GO:0042254: ribosome biogenesis	2.71E-02
66	GO:0009860: pollen tube growth	2.82E-02
67	GO:0007049: cell cycle	2.89E-02
68	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.19E-02
69	GO:0046777: protein autophosphorylation	3.27E-02
70	GO:0009408: response to heat	4.11E-02
71	GO:0048364: root development	4.24E-02
72	GO:0008152: metabolic process	4.41E-02
73	GO:0009793: embryo development ending in seed dormancy	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
2	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
3	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
4	GO:0015220: choline transmembrane transporter activity	0.00E+00
5	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
6	GO:0004008: copper-exporting ATPase activity	3.50E-05
7	GO:0004829: threonine-tRNA ligase activity	8.78E-05
8	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	8.78E-05
9	GO:0008430: selenium binding	1.52E-04
10	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.52E-04
11	GO:0032947: protein complex scaffold	1.52E-04
12	GO:0048038: quinone binding	2.01E-04
13	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.05E-04
14	GO:0016987: sigma factor activity	3.05E-04
15	GO:0001053: plastid sigma factor activity	3.05E-04
16	GO:0009927: histidine phosphotransfer kinase activity	5.70E-04
17	GO:0043022: ribosome binding	7.68E-04
18	GO:0005375: copper ion transmembrane transporter activity	8.71E-04
19	GO:0016844: strictosidine synthase activity	1.09E-03
20	GO:0004568: chitinase activity	1.20E-03
21	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.32E-03
22	GO:0016829: lyase activity	1.54E-03
23	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.57E-03
24	GO:0008017: microtubule binding	2.04E-03
25	GO:0051536: iron-sulfur cluster binding	2.12E-03
26	GO:0030570: pectate lyase activity	2.71E-03
27	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.60E-03
28	GO:0016413: O-acetyltransferase activity	4.80E-03
29	GO:0030247: polysaccharide binding	5.58E-03
30	GO:0005096: GTPase activator activity	6.19E-03
31	GO:0051537: 2 iron, 2 sulfur cluster binding	8.88E-03
32	GO:0035091: phosphatidylinositol binding	8.88E-03
33	GO:0016787: hydrolase activity	8.97E-03
34	GO:0005198: structural molecule activity	9.12E-03
35	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.04E-02
36	GO:0003777: microtubule motor activity	1.11E-02
37	GO:0004252: serine-type endopeptidase activity	1.68E-02
38	GO:0046872: metal ion binding	1.73E-02
39	GO:0015144: carbohydrate transmembrane transporter activity	1.77E-02
40	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.86E-02
41	GO:0005351: sugar:proton symporter activity	1.93E-02
42	GO:0008194: UDP-glycosyltransferase activity	2.12E-02
43	GO:0003743: translation initiation factor activity	2.19E-02
44	GO:0004842: ubiquitin-protein transferase activity	2.71E-02
45	GO:0052689: carboxylic ester hydrolase activity	3.34E-02
46	GO:0042803: protein homodimerization activity	3.66E-02
47	GO:0009055: electron carrier activity	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0097218: sieve plate	0.00E+00
2	GO:0009574: preprophase band	4.39E-05
3	GO:0009507: chloroplast	2.51E-04
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	9.78E-04
5	GO:0016324: apical plasma membrane	1.20E-03
6	GO:0009524: phragmoplast	1.50E-03
7	GO:0005769: early endosome	1.97E-03
8	GO:0046658: anchored component of plasma membrane	2.56E-03
9	GO:0005871: kinesin complex	3.03E-03
10	GO:0005874: microtubule	3.57E-03
11	GO:0009536: plastid	4.43E-03
12	GO:0019005: SCF ubiquitin ligase complex	5.99E-03
13	GO:0009707: chloroplast outer membrane	5.99E-03
14	GO:0009535: chloroplast thylakoid membrane	9.49E-03
15	GO:0031225: anchored component of membrane	1.51E-02
16	GO:0048046: apoplast	1.76E-02
17	GO:0005759: mitochondrial matrix	1.83E-02
18	GO:0009505: plant-type cell wall	2.46E-02
19	GO:0031969: chloroplast membrane	3.11E-02
20	GO:0009570: chloroplast stroma	3.67E-02