GO Enrichment Analysis of Co-expressed Genes with
AT2G46220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 3 | GO:0009854: oxidative photosynthetic carbon pathway | 2.69E-05 |
| 4 | GO:0071482: cellular response to light stimulus | 6.09E-05 |
| 5 | GO:0043953: protein transport by the Tat complex | 8.96E-05 |
| 6 | GO:0051775: response to redox state | 8.96E-05 |
| 7 | GO:0009443: pyridoxal 5'-phosphate salvage | 8.96E-05 |
| 8 | GO:0046467: membrane lipid biosynthetic process | 8.96E-05 |
| 9 | GO:0019544: arginine catabolic process to glutamate | 8.96E-05 |
| 10 | GO:0000481: maturation of 5S rRNA | 8.96E-05 |
| 11 | GO:0042371: vitamin K biosynthetic process | 8.96E-05 |
| 12 | GO:0065002: intracellular protein transmembrane transport | 8.96E-05 |
| 13 | GO:0071461: cellular response to redox state | 8.96E-05 |
| 14 | GO:0034337: RNA folding | 8.96E-05 |
| 15 | GO:0043085: positive regulation of catalytic activity | 1.29E-04 |
| 16 | GO:0009767: photosynthetic electron transport chain | 1.73E-04 |
| 17 | GO:0051645: Golgi localization | 2.12E-04 |
| 18 | GO:0071457: cellular response to ozone | 2.12E-04 |
| 19 | GO:0080005: photosystem stoichiometry adjustment | 2.12E-04 |
| 20 | GO:0010541: acropetal auxin transport | 2.12E-04 |
| 21 | GO:0060151: peroxisome localization | 2.12E-04 |
| 22 | GO:0051646: mitochondrion localization | 3.54E-04 |
| 23 | GO:0010160: formation of animal organ boundary | 3.54E-04 |
| 24 | GO:0090436: leaf pavement cell development | 3.54E-04 |
| 25 | GO:0005977: glycogen metabolic process | 3.54E-04 |
| 26 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 5.10E-04 |
| 27 | GO:0010731: protein glutathionylation | 5.10E-04 |
| 28 | GO:2001141: regulation of RNA biosynthetic process | 5.10E-04 |
| 29 | GO:0071484: cellular response to light intensity | 5.10E-04 |
| 30 | GO:0006107: oxaloacetate metabolic process | 5.10E-04 |
| 31 | GO:0009791: post-embryonic development | 6.33E-04 |
| 32 | GO:0019252: starch biosynthetic process | 6.33E-04 |
| 33 | GO:0055114: oxidation-reduction process | 6.61E-04 |
| 34 | GO:2000122: negative regulation of stomatal complex development | 6.78E-04 |
| 35 | GO:0006546: glycine catabolic process | 6.78E-04 |
| 36 | GO:0006734: NADH metabolic process | 6.78E-04 |
| 37 | GO:0010021: amylopectin biosynthetic process | 6.78E-04 |
| 38 | GO:0010037: response to carbon dioxide | 6.78E-04 |
| 39 | GO:0015976: carbon utilization | 6.78E-04 |
| 40 | GO:0071486: cellular response to high light intensity | 6.78E-04 |
| 41 | GO:0006109: regulation of carbohydrate metabolic process | 6.78E-04 |
| 42 | GO:0071493: cellular response to UV-B | 8.59E-04 |
| 43 | GO:0043097: pyrimidine nucleoside salvage | 8.59E-04 |
| 44 | GO:0000278: mitotic cell cycle | 8.59E-04 |
| 45 | GO:0006206: pyrimidine nucleobase metabolic process | 1.05E-03 |
| 46 | GO:0060918: auxin transport | 1.05E-03 |
| 47 | GO:0050665: hydrogen peroxide biosynthetic process | 1.05E-03 |
| 48 | GO:0015995: chlorophyll biosynthetic process | 1.12E-03 |
| 49 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 1.25E-03 |
| 50 | GO:0010189: vitamin E biosynthetic process | 1.25E-03 |
| 51 | GO:0010019: chloroplast-nucleus signaling pathway | 1.25E-03 |
| 52 | GO:0009645: response to low light intensity stimulus | 1.46E-03 |
| 53 | GO:0009853: photorespiration | 1.56E-03 |
| 54 | GO:0006810: transport | 1.60E-03 |
| 55 | GO:0034599: cellular response to oxidative stress | 1.63E-03 |
| 56 | GO:0032508: DNA duplex unwinding | 1.69E-03 |
| 57 | GO:0052543: callose deposition in cell wall | 1.69E-03 |
| 58 | GO:0016559: peroxisome fission | 1.69E-03 |
| 59 | GO:0005975: carbohydrate metabolic process | 1.70E-03 |
| 60 | GO:0019430: removal of superoxide radicals | 1.93E-03 |
| 61 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.93E-03 |
| 62 | GO:0017004: cytochrome complex assembly | 1.93E-03 |
| 63 | GO:0006754: ATP biosynthetic process | 2.18E-03 |
| 64 | GO:0015979: photosynthesis | 2.33E-03 |
| 65 | GO:0007346: regulation of mitotic cell cycle | 2.43E-03 |
| 66 | GO:0043069: negative regulation of programmed cell death | 2.70E-03 |
| 67 | GO:0019684: photosynthesis, light reaction | 2.98E-03 |
| 68 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.98E-03 |
| 69 | GO:0006352: DNA-templated transcription, initiation | 2.98E-03 |
| 70 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.98E-03 |
| 71 | GO:0009684: indoleacetic acid biosynthetic process | 2.98E-03 |
| 72 | GO:0008361: regulation of cell size | 3.26E-03 |
| 73 | GO:0030048: actin filament-based movement | 3.56E-03 |
| 74 | GO:0006108: malate metabolic process | 3.56E-03 |
| 75 | GO:0048467: gynoecium development | 3.86E-03 |
| 76 | GO:0010020: chloroplast fission | 3.86E-03 |
| 77 | GO:0019253: reductive pentose-phosphate cycle | 3.86E-03 |
| 78 | GO:0010207: photosystem II assembly | 3.86E-03 |
| 79 | GO:0010540: basipetal auxin transport | 3.86E-03 |
| 80 | GO:0042343: indole glucosinolate metabolic process | 4.18E-03 |
| 81 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.50E-03 |
| 82 | GO:0042023: DNA endoreduplication | 4.50E-03 |
| 83 | GO:0006833: water transport | 4.50E-03 |
| 84 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.17E-03 |
| 85 | GO:0098542: defense response to other organism | 5.52E-03 |
| 86 | GO:0009409: response to cold | 5.91E-03 |
| 87 | GO:0006633: fatty acid biosynthetic process | 5.94E-03 |
| 88 | GO:0048443: stamen development | 6.61E-03 |
| 89 | GO:0034220: ion transmembrane transport | 7.37E-03 |
| 90 | GO:0042631: cellular response to water deprivation | 7.37E-03 |
| 91 | GO:0071472: cellular response to salt stress | 7.77E-03 |
| 92 | GO:0010154: fruit development | 7.77E-03 |
| 93 | GO:0009958: positive gravitropism | 7.77E-03 |
| 94 | GO:0006520: cellular amino acid metabolic process | 7.77E-03 |
| 95 | GO:0006662: glycerol ether metabolic process | 7.77E-03 |
| 96 | GO:0008654: phospholipid biosynthetic process | 8.58E-03 |
| 97 | GO:0010090: trichome morphogenesis | 9.85E-03 |
| 98 | GO:1901657: glycosyl compound metabolic process | 9.85E-03 |
| 99 | GO:0009658: chloroplast organization | 1.01E-02 |
| 100 | GO:0009639: response to red or far red light | 1.03E-02 |
| 101 | GO:0009567: double fertilization forming a zygote and endosperm | 1.03E-02 |
| 102 | GO:0010027: thylakoid membrane organization | 1.17E-02 |
| 103 | GO:0009627: systemic acquired resistance | 1.26E-02 |
| 104 | GO:0016311: dephosphorylation | 1.36E-02 |
| 105 | GO:0016049: cell growth | 1.36E-02 |
| 106 | GO:0018298: protein-chromophore linkage | 1.41E-02 |
| 107 | GO:0016310: phosphorylation | 1.45E-02 |
| 108 | GO:0006811: ion transport | 1.51E-02 |
| 109 | GO:0010218: response to far red light | 1.51E-02 |
| 110 | GO:0009631: cold acclimation | 1.56E-02 |
| 111 | GO:0048527: lateral root development | 1.56E-02 |
| 112 | GO:0010119: regulation of stomatal movement | 1.56E-02 |
| 113 | GO:0009637: response to blue light | 1.66E-02 |
| 114 | GO:0006099: tricarboxylic acid cycle | 1.72E-02 |
| 115 | GO:0006631: fatty acid metabolic process | 1.88E-02 |
| 116 | GO:0009640: photomorphogenesis | 1.99E-02 |
| 117 | GO:0009926: auxin polar transport | 1.99E-02 |
| 118 | GO:0009644: response to high light intensity | 2.10E-02 |
| 119 | GO:0009636: response to toxic substance | 2.16E-02 |
| 120 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.52E-02 |
| 121 | GO:0043086: negative regulation of catalytic activity | 2.77E-02 |
| 122 | GO:0046686: response to cadmium ion | 2.85E-02 |
| 123 | GO:0009735: response to cytokinin | 3.01E-02 |
| 124 | GO:0051726: regulation of cell cycle | 3.30E-02 |
| 125 | GO:0051301: cell division | 3.59E-02 |
| 126 | GO:0009058: biosynthetic process | 3.85E-02 |
| 127 | GO:0009845: seed germination | 3.92E-02 |
| 128 | GO:0055085: transmembrane transport | 4.17E-02 |
| 129 | GO:0006413: translational initiation | 4.44E-02 |
| 130 | GO:0007623: circadian rhythm | 4.67E-02 |
| 131 | GO:0045490: pectin catabolic process | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 3 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 4 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 6 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 7 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 8 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 9 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 10 | GO:0016491: oxidoreductase activity | 5.72E-06 |
| 11 | GO:0009011: starch synthase activity | 7.45E-06 |
| 12 | GO:0080132: fatty acid alpha-hydroxylase activity | 8.96E-05 |
| 13 | GO:0008746: NAD(P)+ transhydrogenase activity | 8.96E-05 |
| 14 | GO:0004328: formamidase activity | 8.96E-05 |
| 15 | GO:0046906: tetrapyrrole binding | 8.96E-05 |
| 16 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 2.12E-04 |
| 17 | GO:0019156: isoamylase activity | 2.12E-04 |
| 18 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.12E-04 |
| 19 | GO:0004103: choline kinase activity | 2.12E-04 |
| 20 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.12E-04 |
| 21 | GO:0004047: aminomethyltransferase activity | 2.12E-04 |
| 22 | GO:0004312: fatty acid synthase activity | 2.12E-04 |
| 23 | GO:0070402: NADPH binding | 3.54E-04 |
| 24 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 3.54E-04 |
| 25 | GO:0016851: magnesium chelatase activity | 5.10E-04 |
| 26 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 5.10E-04 |
| 27 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 5.10E-04 |
| 28 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 5.10E-04 |
| 29 | GO:0001872: (1->3)-beta-D-glucan binding | 5.10E-04 |
| 30 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 5.10E-04 |
| 31 | GO:0008453: alanine-glyoxylate transaminase activity | 6.78E-04 |
| 32 | GO:0016987: sigma factor activity | 6.78E-04 |
| 33 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 6.78E-04 |
| 34 | GO:0008891: glycolate oxidase activity | 6.78E-04 |
| 35 | GO:0001053: plastid sigma factor activity | 6.78E-04 |
| 36 | GO:0004040: amidase activity | 8.59E-04 |
| 37 | GO:0000293: ferric-chelate reductase activity | 1.05E-03 |
| 38 | GO:0004784: superoxide dismutase activity | 1.05E-03 |
| 39 | GO:0004556: alpha-amylase activity | 1.05E-03 |
| 40 | GO:0016615: malate dehydrogenase activity | 1.05E-03 |
| 41 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.05E-03 |
| 42 | GO:0042802: identical protein binding | 1.18E-03 |
| 43 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.25E-03 |
| 44 | GO:0030060: L-malate dehydrogenase activity | 1.25E-03 |
| 45 | GO:0004849: uridine kinase activity | 1.25E-03 |
| 46 | GO:0019899: enzyme binding | 1.46E-03 |
| 47 | GO:0003993: acid phosphatase activity | 1.63E-03 |
| 48 | GO:0004033: aldo-keto reductase (NADP) activity | 1.69E-03 |
| 49 | GO:0008135: translation factor activity, RNA binding | 1.93E-03 |
| 50 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.95E-03 |
| 51 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.18E-03 |
| 52 | GO:0008047: enzyme activator activity | 2.70E-03 |
| 53 | GO:0004565: beta-galactosidase activity | 3.56E-03 |
| 54 | GO:0010329: auxin efflux transmembrane transporter activity | 3.56E-03 |
| 55 | GO:0004089: carbonate dehydratase activity | 3.56E-03 |
| 56 | GO:0008266: poly(U) RNA binding | 3.86E-03 |
| 57 | GO:0003774: motor activity | 3.86E-03 |
| 58 | GO:0031409: pigment binding | 4.50E-03 |
| 59 | GO:0005528: FK506 binding | 4.83E-03 |
| 60 | GO:0004857: enzyme inhibitor activity | 4.83E-03 |
| 61 | GO:0043130: ubiquitin binding | 4.83E-03 |
| 62 | GO:0016887: ATPase activity | 5.61E-03 |
| 63 | GO:0030570: pectate lyase activity | 6.23E-03 |
| 64 | GO:0047134: protein-disulfide reductase activity | 6.99E-03 |
| 65 | GO:0010181: FMN binding | 8.17E-03 |
| 66 | GO:0004791: thioredoxin-disulfide reductase activity | 8.17E-03 |
| 67 | GO:0019901: protein kinase binding | 8.58E-03 |
| 68 | GO:0048038: quinone binding | 8.99E-03 |
| 69 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.85E-03 |
| 70 | GO:0008483: transaminase activity | 1.07E-02 |
| 71 | GO:0015250: water channel activity | 1.17E-02 |
| 72 | GO:0016168: chlorophyll binding | 1.21E-02 |
| 73 | GO:0102483: scopolin beta-glucosidase activity | 1.31E-02 |
| 74 | GO:0030247: polysaccharide binding | 1.31E-02 |
| 75 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.51E-02 |
| 76 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.56E-02 |
| 77 | GO:0003746: translation elongation factor activity | 1.66E-02 |
| 78 | GO:0008422: beta-glucosidase activity | 1.77E-02 |
| 79 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.77E-02 |
| 80 | GO:0042393: histone binding | 1.82E-02 |
| 81 | GO:0003824: catalytic activity | 1.84E-02 |
| 82 | GO:0005215: transporter activity | 1.85E-02 |
| 83 | GO:0003924: GTPase activity | 1.86E-02 |
| 84 | GO:0004364: glutathione transferase activity | 1.93E-02 |
| 85 | GO:0004185: serine-type carboxypeptidase activity | 1.99E-02 |
| 86 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.22E-02 |
| 87 | GO:0051287: NAD binding | 2.28E-02 |
| 88 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.46E-02 |
| 89 | GO:0008289: lipid binding | 2.58E-02 |
| 90 | GO:0003779: actin binding | 3.10E-02 |
| 91 | GO:0015035: protein disulfide oxidoreductase activity | 3.23E-02 |
| 92 | GO:0016829: lyase activity | 3.92E-02 |
| 93 | GO:0030170: pyridoxal phosphate binding | 4.00E-02 |
| 94 | GO:0016787: hydrolase activity | 4.22E-02 |
| 95 | GO:0015144: carbohydrate transmembrane transporter activity | 4.22E-02 |
| 96 | GO:0005351: sugar:proton symporter activity | 4.59E-02 |
| 97 | GO:0008017: microtubule binding | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.46E-15 |
| 3 | GO:0009570: chloroplast stroma | 1.02E-06 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 4.49E-06 |
| 5 | GO:0009941: chloroplast envelope | 1.15E-05 |
| 6 | GO:0048046: apoplast | 2.77E-05 |
| 7 | GO:0009782: photosystem I antenna complex | 8.96E-05 |
| 8 | GO:0009344: nitrite reductase complex [NAD(P)H] | 8.96E-05 |
| 9 | GO:0031361: integral component of thylakoid membrane | 8.96E-05 |
| 10 | GO:0005777: peroxisome | 2.97E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 3.54E-04 |
| 12 | GO:0033281: TAT protein transport complex | 3.54E-04 |
| 13 | GO:0005773: vacuole | 4.13E-04 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 5.88E-04 |
| 15 | GO:0010319: stromule | 8.61E-04 |
| 16 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 1.93E-03 |
| 17 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.18E-03 |
| 18 | GO:0016459: myosin complex | 2.70E-03 |
| 19 | GO:0032040: small-subunit processome | 3.26E-03 |
| 20 | GO:0016020: membrane | 3.69E-03 |
| 21 | GO:0030095: chloroplast photosystem II | 3.86E-03 |
| 22 | GO:0030076: light-harvesting complex | 4.18E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 5.17E-03 |
| 24 | GO:0009522: photosystem I | 8.17E-03 |
| 25 | GO:0009579: thylakoid | 8.36E-03 |
| 26 | GO:0009534: chloroplast thylakoid | 8.47E-03 |
| 27 | GO:0019898: extrinsic component of membrane | 8.58E-03 |
| 28 | GO:0046658: anchored component of plasma membrane | 8.64E-03 |
| 29 | GO:0031969: chloroplast membrane | 1.25E-02 |
| 30 | GO:0009707: chloroplast outer membrane | 1.41E-02 |
| 31 | GO:0019005: SCF ubiquitin ligase complex | 1.41E-02 |
| 32 | GO:0031977: thylakoid lumen | 1.88E-02 |
| 33 | GO:0009505: plant-type cell wall | 2.17E-02 |
| 34 | GO:0010287: plastoglobule | 3.57E-02 |