Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:1902289: negative regulation of defense response to oomycetes0.00E+00
4GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
5GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
6GO:0046865: terpenoid transport0.00E+00
7GO:0018063: cytochrome c-heme linkage0.00E+00
8GO:1902009: positive regulation of toxin transport0.00E+00
9GO:0051553: flavone biosynthetic process0.00E+00
10GO:1900057: positive regulation of leaf senescence6.35E-06
11GO:0010112: regulation of systemic acquired resistance1.91E-05
12GO:0042742: defense response to bacterium3.84E-05
13GO:0071456: cellular response to hypoxia1.96E-04
14GO:0051707: response to other organism2.73E-04
15GO:0009968: negative regulation of signal transduction3.24E-04
16GO:1990542: mitochondrial transmembrane transport3.24E-04
17GO:0032107: regulation of response to nutrient levels3.24E-04
18GO:1902600: hydrogen ion transmembrane transport3.24E-04
19GO:0043547: positive regulation of GTPase activity3.24E-04
20GO:1990641: response to iron ion starvation3.24E-04
21GO:0033306: phytol metabolic process3.24E-04
22GO:0010230: alternative respiration3.24E-04
23GO:0010482: regulation of epidermal cell division3.24E-04
24GO:0050691: regulation of defense response to virus by host3.24E-04
25GO:1900384: regulation of flavonol biosynthetic process3.24E-04
26GO:0009636: response to toxic substance3.30E-04
27GO:0006102: isocitrate metabolic process3.40E-04
28GO:0015031: protein transport3.52E-04
29GO:0006623: protein targeting to vacuole4.13E-04
30GO:0009617: response to bacterium4.64E-04
31GO:0009751: response to salicylic acid5.03E-04
32GO:0051607: defense response to virus6.71E-04
33GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.07E-04
34GO:0006024: glycosaminoglycan biosynthetic process7.07E-04
35GO:0055088: lipid homeostasis7.07E-04
36GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex7.07E-04
37GO:0015908: fatty acid transport7.07E-04
38GO:0044419: interspecies interaction between organisms7.07E-04
39GO:0006101: citrate metabolic process7.07E-04
40GO:0000719: photoreactive repair7.07E-04
41GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.07E-04
42GO:0015012: heparan sulfate proteoglycan biosynthetic process7.07E-04
43GO:0071668: plant-type cell wall assembly7.07E-04
44GO:0010200: response to chitin1.14E-03
45GO:0071398: cellular response to fatty acid1.15E-03
46GO:0006065: UDP-glucuronate biosynthetic process1.15E-03
47GO:0015692: lead ion transport1.15E-03
48GO:0052546: cell wall pectin metabolic process1.15E-03
49GO:0002230: positive regulation of defense response to virus by host1.15E-03
50GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.15E-03
51GO:0080168: abscisic acid transport1.15E-03
52GO:0080163: regulation of protein serine/threonine phosphatase activity1.15E-03
53GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.15E-03
54GO:0002237: response to molecule of bacterial origin1.16E-03
55GO:0006099: tricarboxylic acid cycle1.43E-03
56GO:0080147: root hair cell development1.59E-03
57GO:0001676: long-chain fatty acid metabolic process1.65E-03
58GO:0010116: positive regulation of abscisic acid biosynthetic process1.65E-03
59GO:0006020: inositol metabolic process1.65E-03
60GO:0070301: cellular response to hydrogen peroxide1.65E-03
61GO:0002239: response to oomycetes1.65E-03
62GO:1902290: positive regulation of defense response to oomycetes1.65E-03
63GO:0080024: indolebutyric acid metabolic process1.65E-03
64GO:0055070: copper ion homeostasis1.65E-03
65GO:0010150: leaf senescence1.73E-03
66GO:0051567: histone H3-K9 methylation2.21E-03
67GO:1901002: positive regulation of response to salt stress2.21E-03
68GO:0015867: ATP transport2.21E-03
69GO:0006097: glyoxylate cycle2.82E-03
70GO:0009229: thiamine diphosphate biosynthetic process2.82E-03
71GO:0034052: positive regulation of plant-type hypersensitive response2.82E-03
72GO:0046283: anthocyanin-containing compound metabolic process2.82E-03
73GO:0010182: sugar mediated signaling pathway3.16E-03
74GO:0015866: ADP transport3.49E-03
75GO:0006777: Mo-molybdopterin cofactor biosynthetic process3.49E-03
76GO:0010256: endomembrane system organization3.49E-03
77GO:0009228: thiamine biosynthetic process3.49E-03
78GO:1900425: negative regulation of defense response to bacterium3.49E-03
79GO:0009643: photosynthetic acclimation3.49E-03
80GO:0009759: indole glucosinolate biosynthetic process3.49E-03
81GO:0009620: response to fungus3.81E-03
82GO:0002229: defense response to oomycetes3.89E-03
83GO:0010193: response to ozone3.89E-03
84GO:1902074: response to salt4.95E-03
85GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.95E-03
86GO:1900056: negative regulation of leaf senescence4.95E-03
87GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.95E-03
88GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.95E-03
89GO:0031540: regulation of anthocyanin biosynthetic process5.76E-03
90GO:0016559: peroxisome fission5.76E-03
91GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.76E-03
92GO:0009819: drought recovery5.76E-03
93GO:0009850: auxin metabolic process5.76E-03
94GO:0043068: positive regulation of programmed cell death5.76E-03
95GO:0006605: protein targeting5.76E-03
96GO:0009627: systemic acquired resistance6.29E-03
97GO:0017004: cytochrome complex assembly6.60E-03
98GO:0010208: pollen wall assembly6.60E-03
99GO:0010120: camalexin biosynthetic process6.60E-03
100GO:0006997: nucleus organization6.60E-03
101GO:0010204: defense response signaling pathway, resistance gene-independent6.60E-03
102GO:0006979: response to oxidative stress6.61E-03
103GO:0009835: fruit ripening7.48E-03
104GO:0007338: single fertilization7.48E-03
105GO:0019432: triglyceride biosynthetic process7.48E-03
106GO:0009407: toxin catabolic process8.11E-03
107GO:1900426: positive regulation of defense response to bacterium8.41E-03
108GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.41E-03
109GO:0008202: steroid metabolic process8.41E-03
110GO:0050832: defense response to fungus8.44E-03
111GO:0009688: abscisic acid biosynthetic process9.37E-03
112GO:0051555: flavonol biosynthetic process9.37E-03
113GO:0009870: defense response signaling pathway, resistance gene-dependent9.37E-03
114GO:0006032: chitin catabolic process9.37E-03
115GO:0009753: response to jasmonic acid9.43E-03
116GO:0048765: root hair cell differentiation1.04E-02
117GO:0009684: indoleacetic acid biosynthetic process1.04E-02
118GO:0019684: photosynthesis, light reaction1.04E-02
119GO:0006631: fatty acid metabolic process1.11E-02
120GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.14E-02
121GO:0000266: mitochondrial fission1.14E-02
122GO:0045037: protein import into chloroplast stroma1.14E-02
123GO:2000012: regulation of auxin polar transport1.25E-02
124GO:0006855: drug transmembrane transport1.41E-02
125GO:0031347: regulation of defense response1.46E-02
126GO:0009225: nucleotide-sugar metabolic process1.48E-02
127GO:0046688: response to copper ion1.48E-02
128GO:0090351: seedling development1.48E-02
129GO:0006952: defense response1.54E-02
130GO:0000162: tryptophan biosynthetic process1.60E-02
131GO:0006970: response to osmotic stress1.65E-02
132GO:2000377: regulation of reactive oxygen species metabolic process1.72E-02
133GO:0030150: protein import into mitochondrial matrix1.72E-02
134GO:0006289: nucleotide-excision repair1.72E-02
135GO:0006825: copper ion transport1.84E-02
136GO:0051302: regulation of cell division1.84E-02
137GO:0006874: cellular calcium ion homeostasis1.84E-02
138GO:0010026: trichome differentiation1.84E-02
139GO:0016998: cell wall macromolecule catabolic process1.97E-02
140GO:0006334: nucleosome assembly1.97E-02
141GO:0009626: plant-type hypersensitive response2.06E-02
142GO:0007005: mitochondrion organization2.10E-02
143GO:0031348: negative regulation of defense response2.10E-02
144GO:0006012: galactose metabolic process2.23E-02
145GO:0009693: ethylene biosynthetic process2.23E-02
146GO:0009411: response to UV2.23E-02
147GO:0042127: regulation of cell proliferation2.37E-02
148GO:0042147: retrograde transport, endosome to Golgi2.51E-02
149GO:0010118: stomatal movement2.65E-02
150GO:0006869: lipid transport2.77E-02
151GO:0009737: response to abscisic acid2.78E-02
152GO:0048868: pollen tube development2.80E-02
153GO:0006520: cellular amino acid metabolic process2.80E-02
154GO:0009749: response to glucose3.10E-02
155GO:0006629: lipid metabolic process3.20E-02
156GO:0071554: cell wall organization or biogenesis3.25E-02
157GO:0000302: response to reactive oxygen species3.25E-02
158GO:0006891: intra-Golgi vesicle-mediated transport3.25E-02
159GO:0006635: fatty acid beta-oxidation3.25E-02
160GO:0009567: double fertilization forming a zygote and endosperm3.73E-02
161GO:0071805: potassium ion transmembrane transport3.89E-02
162GO:0046686: response to cadmium ion4.13E-02
163GO:0010029: regulation of seed germination4.40E-02
164GO:0009816: defense response to bacterium, incompatible interaction4.40E-02
165GO:0007166: cell surface receptor signaling pathway4.57E-02
166GO:0006906: vesicle fusion4.57E-02
167GO:0006888: ER to Golgi vesicle-mediated transport4.75E-02
168GO:0008380: RNA splicing4.77E-02
169GO:0009734: auxin-activated signaling pathway4.87E-02
RankGO TermAdjusted P value
1GO:0033759: flavone synthase activity0.00E+00
2GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
3GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
4GO:0050334: thiaminase activity0.00E+00
5GO:0102391: decanoate--CoA ligase activity2.07E-04
6GO:0004467: long-chain fatty acid-CoA ligase activity2.70E-04
7GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.24E-04
8GO:2001227: quercitrin binding3.24E-04
9GO:0030942: endoplasmic reticulum signal peptide binding3.24E-04
10GO:0047940: glucuronokinase activity3.24E-04
11GO:2001147: camalexin binding3.24E-04
12GO:0009000: selenocysteine lyase activity3.24E-04
13GO:0015245: fatty acid transporter activity3.24E-04
14GO:0003994: aconitate hydratase activity7.07E-04
15GO:0032934: sterol binding7.07E-04
16GO:0050736: O-malonyltransferase activity7.07E-04
17GO:0004806: triglyceride lipase activity8.87E-04
18GO:0003979: UDP-glucose 6-dehydrogenase activity1.15E-03
19GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.15E-03
20GO:0004324: ferredoxin-NADP+ reductase activity1.15E-03
21GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.15E-03
22GO:0016531: copper chaperone activity1.15E-03
23GO:0043169: cation binding1.15E-03
24GO:0032403: protein complex binding1.15E-03
25GO:0017077: oxidative phosphorylation uncoupler activity1.65E-03
26GO:0004449: isocitrate dehydrogenase (NAD+) activity1.65E-03
27GO:0035529: NADH pyrophosphatase activity1.65E-03
28GO:0022890: inorganic cation transmembrane transporter activity1.65E-03
29GO:0010178: IAA-amino acid conjugate hydrolase activity1.65E-03
30GO:0004834: tryptophan synthase activity2.21E-03
31GO:0004930: G-protein coupled receptor activity2.21E-03
32GO:0050378: UDP-glucuronate 4-epimerase activity2.21E-03
33GO:0030151: molybdenum ion binding2.82E-03
34GO:0016773: phosphotransferase activity, alcohol group as acceptor2.82E-03
35GO:0047631: ADP-ribose diphosphatase activity2.82E-03
36GO:0000210: NAD+ diphosphatase activity3.49E-03
37GO:0015217: ADP transmembrane transporter activity4.20E-03
38GO:0003978: UDP-glucose 4-epimerase activity4.20E-03
39GO:0004144: diacylglycerol O-acyltransferase activity4.20E-03
40GO:0005347: ATP transmembrane transporter activity4.20E-03
41GO:0004656: procollagen-proline 4-dioxygenase activity4.20E-03
42GO:0008320: protein transmembrane transporter activity4.95E-03
43GO:0043295: glutathione binding4.95E-03
44GO:0008312: 7S RNA binding5.76E-03
45GO:0047893: flavonol 3-O-glucosyltransferase activity5.76E-03
46GO:0052747: sinapyl alcohol dehydrogenase activity5.76E-03
47GO:0008142: oxysterol binding6.60E-03
48GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity7.48E-03
49GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors9.33E-03
50GO:0004568: chitinase activity9.37E-03
51GO:0004864: protein phosphatase inhibitor activity9.37E-03
52GO:0015386: potassium:proton antiporter activity1.04E-02
53GO:0045551: cinnamyl-alcohol dehydrogenase activity1.14E-02
54GO:0004364: glutathione transferase activity1.16E-02
55GO:0008266: poly(U) RNA binding1.36E-02
56GO:0051287: NAD binding1.46E-02
57GO:0003712: transcription cofactor activity1.48E-02
58GO:0005217: intracellular ligand-gated ion channel activity1.48E-02
59GO:0004970: ionotropic glutamate receptor activity1.48E-02
60GO:0031418: L-ascorbic acid binding1.72E-02
61GO:0005509: calcium ion binding1.72E-02
62GO:0001046: core promoter sequence-specific DNA binding1.72E-02
63GO:0015079: potassium ion transmembrane transporter activity1.84E-02
64GO:0035251: UDP-glucosyltransferase activity1.97E-02
65GO:0004499: N,N-dimethylaniline monooxygenase activity2.37E-02
66GO:0016746: transferase activity, transferring acyl groups2.39E-02
67GO:0016740: transferase activity2.70E-02
68GO:0016787: hydrolase activity2.80E-02
69GO:0015299: solute:proton antiporter activity2.95E-02
70GO:0050662: coenzyme binding2.95E-02
71GO:0030170: pyridoxal phosphate binding3.23E-02
72GO:0005507: copper ion binding3.39E-02
73GO:0004197: cysteine-type endopeptidase activity3.41E-02
74GO:0015297: antiporter activity3.83E-02
75GO:0008483: transaminase activity3.89E-02
76GO:0008237: metallopeptidase activity3.89E-02
77GO:0016413: O-acetyltransferase activity4.06E-02
78GO:0008375: acetylglucosaminyltransferase activity4.57E-02
79GO:0030247: polysaccharide binding4.75E-02
80GO:0046872: metal ion binding4.85E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane2.81E-07
2GO:0005794: Golgi apparatus2.83E-05
3GO:0000813: ESCRT I complex1.05E-04
4GO:0045252: oxoglutarate dehydrogenase complex3.24E-04
5GO:0005802: trans-Golgi network3.55E-04
6GO:0017119: Golgi transport complex6.91E-04
7GO:0042406: extrinsic component of endoplasmic reticulum membrane1.15E-03
8GO:0005768: endosome1.63E-03
9GO:0030658: transport vesicle membrane1.65E-03
10GO:0005789: endoplasmic reticulum membrane1.75E-03
11GO:0005743: mitochondrial inner membrane1.87E-03
12GO:0000164: protein phosphatase type 1 complex2.82E-03
13GO:0031965: nuclear membrane3.64E-03
14GO:0005779: integral component of peroxisomal membrane6.60E-03
15GO:0005786: signal recognition particle, endoplasmic reticulum targeting6.60E-03
16GO:0030665: clathrin-coated vesicle membrane8.41E-03
17GO:0008540: proteasome regulatory particle, base subcomplex8.41E-03
18GO:0031225: anchored component of membrane1.26E-02
19GO:0005758: mitochondrial intermembrane space1.72E-02
20GO:0005741: mitochondrial outer membrane1.97E-02
21GO:0005744: mitochondrial inner membrane presequence translocase complex2.37E-02
22GO:0005783: endoplasmic reticulum2.68E-02
23GO:0019898: extrinsic component of membrane3.10E-02
24GO:0009504: cell plate3.10E-02
25GO:0000139: Golgi membrane3.28E-02
26GO:0032580: Golgi cisterna membrane3.73E-02
27GO:0005778: peroxisomal membrane3.89E-02
28GO:0009705: plant-type vacuole membrane4.01E-02
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Gene type



Gene DE type