co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G45400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0006664: glycolipid metabolic process	0.00E+00
3	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
4	GO:0046620: regulation of organ growth	1.89E-06
5	GO:0010480: microsporocyte differentiation	1.69E-04
6	GO:0015904: tetracycline transport	1.69E-04
7	GO:0046520: sphingoid biosynthetic process	1.69E-04
8	GO:1900871: chloroplast mRNA modification	3.83E-04
9	GO:0006432: phenylalanyl-tRNA aminoacylation	3.83E-04
10	GO:0071497: cellular response to freezing	3.83E-04
11	GO:0080009: mRNA methylation	3.83E-04
12	GO:0009786: regulation of asymmetric cell division	3.83E-04
13	GO:0009926: auxin polar transport	5.79E-04
14	GO:0071398: cellular response to fatty acid	6.25E-04
15	GO:0033591: response to L-ascorbic acid	6.25E-04
16	GO:0010371: regulation of gibberellin biosynthetic process	8.93E-04
17	GO:0009755: hormone-mediated signaling pathway	1.18E-03
18	GO:1901141: regulation of lignin biosynthetic process	1.18E-03
19	GO:0010182: sugar mediated signaling pathway	1.26E-03
20	GO:0010438: cellular response to sulfur starvation	1.50E-03
21	GO:1902456: regulation of stomatal opening	1.85E-03
22	GO:0003006: developmental process involved in reproduction	1.85E-03
23	GO:0030488: tRNA methylation	2.22E-03
24	GO:2000033: regulation of seed dormancy process	2.22E-03
25	GO:0031930: mitochondria-nucleus signaling pathway	2.22E-03
26	GO:0030497: fatty acid elongation	2.61E-03
27	GO:0048437: floral organ development	2.61E-03
28	GO:0006402: mRNA catabolic process	3.02E-03
29	GO:0010439: regulation of glucosinolate biosynthetic process	3.02E-03
30	GO:2000070: regulation of response to water deprivation	3.02E-03
31	GO:0009819: drought recovery	3.02E-03
32	GO:0048507: meristem development	3.91E-03
33	GO:0006631: fatty acid metabolic process	4.33E-03
34	GO:0009638: phototropism	4.38E-03
35	GO:0010018: far-red light signaling pathway	4.38E-03
36	GO:1900865: chloroplast RNA modification	4.38E-03
37	GO:0009733: response to auxin	4.67E-03
38	GO:0009416: response to light stimulus	4.82E-03
39	GO:0009299: mRNA transcription	4.87E-03
40	GO:0048829: root cap development	4.87E-03
41	GO:0009641: shade avoidance	4.87E-03
42	GO:0031627: telomeric loop formation	4.87E-03
43	GO:0010162: seed dormancy process	4.87E-03
44	GO:0048229: gametophyte development	5.38E-03
45	GO:0009682: induced systemic resistance	5.38E-03
46	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.91E-03
47	GO:0010582: floral meristem determinacy	5.91E-03
48	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.19E-03
49	GO:2000028: regulation of photoperiodism, flowering	6.46E-03
50	GO:0010075: regulation of meristem growth	6.46E-03
51	GO:0009725: response to hormone	6.46E-03
52	GO:0010588: cotyledon vascular tissue pattern formation	6.46E-03
53	GO:0010102: lateral root morphogenesis	6.46E-03
54	GO:0009785: blue light signaling pathway	6.46E-03
55	GO:0009934: regulation of meristem structural organization	7.02E-03
56	GO:0048467: gynoecium development	7.02E-03
57	GO:0042753: positive regulation of circadian rhythm	8.20E-03
58	GO:0006071: glycerol metabolic process	8.20E-03
59	GO:0005992: trehalose biosynthetic process	8.81E-03
60	GO:0016042: lipid catabolic process	9.38E-03
61	GO:0009742: brassinosteroid mediated signaling pathway	9.55E-03
62	GO:0010431: seed maturation	1.01E-02
63	GO:0019748: secondary metabolic process	1.08E-02
64	GO:0009625: response to insect	1.14E-02
65	GO:0009693: ethylene biosynthetic process	1.14E-02
66	GO:0071215: cellular response to abscisic acid stimulus	1.14E-02
67	GO:0080022: primary root development	1.36E-02
68	GO:0010087: phloem or xylem histogenesis	1.36E-02
69	GO:0010118: stomatal movement	1.36E-02
70	GO:0048653: anther development	1.36E-02
71	GO:0007165: signal transduction	1.37E-02
72	GO:0010305: leaf vascular tissue pattern formation	1.43E-02
73	GO:0040008: regulation of growth	1.49E-02
74	GO:0009734: auxin-activated signaling pathway	1.50E-02
75	GO:0010583: response to cyclopentenone	1.74E-02
76	GO:0032502: developmental process	1.74E-02
77	GO:1901657: glycosyl compound metabolic process	1.82E-02
78	GO:0009639: response to red or far red light	1.90E-02
79	GO:0006464: cellular protein modification process	1.90E-02
80	GO:0048573: photoperiodism, flowering	2.42E-02
81	GO:0016311: dephosphorylation	2.51E-02
82	GO:0000160: phosphorelay signal transduction system	2.70E-02
83	GO:0010311: lateral root formation	2.70E-02
84	GO:0009631: cold acclimation	2.89E-02
85	GO:0048527: lateral root development	2.89E-02
86	GO:0009867: jasmonic acid mediated signaling pathway	3.08E-02
87	GO:0045892: negative regulation of transcription, DNA-templated	3.65E-02
88	GO:0009640: photomorphogenesis	3.69E-02
89	GO:0009644: response to high light intensity	3.91E-02
90	GO:0006812: cation transport	4.34E-02
91	GO:0009736: cytokinin-activated signaling pathway	4.57E-02
92	GO:0009585: red, far-red light phototransduction	4.57E-02
93	GO:0071555: cell wall organization	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0071633: dihydroceramidase activity	0.00E+00
2	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
3	GO:0000170: sphingosine hydroxylase activity	1.69E-04
4	GO:0050139: nicotinate-N-glucosyltransferase activity	1.69E-04
5	GO:0005227: calcium activated cation channel activity	1.69E-04
6	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	1.69E-04
7	GO:0004871: signal transducer activity	2.97E-04
8	GO:0004103: choline kinase activity	3.83E-04
9	GO:0017118: lipoyltransferase activity	3.83E-04
10	GO:0043425: bHLH transcription factor binding	3.83E-04
11	GO:0042284: sphingolipid delta-4 desaturase activity	3.83E-04
12	GO:0008493: tetracycline transporter activity	3.83E-04
13	GO:0004826: phenylalanine-tRNA ligase activity	3.83E-04
14	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	3.83E-04
15	GO:0046527: glucosyltransferase activity	1.18E-03
16	GO:0019199: transmembrane receptor protein kinase activity	1.18E-03
17	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.50E-03
18	GO:0004523: RNA-DNA hybrid ribonuclease activity	1.50E-03
19	GO:0004518: nuclease activity	1.65E-03
20	GO:0004709: MAP kinase kinase kinase activity	1.85E-03
21	GO:0016759: cellulose synthase activity	1.87E-03
22	GO:0016832: aldehyde-lyase activity	2.22E-03
23	GO:0003723: RNA binding	3.29E-03
24	GO:0008173: RNA methyltransferase activity	3.46E-03
25	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.91E-03
26	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.91E-03
27	GO:0004805: trehalose-phosphatase activity	4.87E-03
28	GO:0003691: double-stranded telomeric DNA binding	5.38E-03
29	GO:0000049: tRNA binding	5.91E-03
30	GO:0003725: double-stranded RNA binding	6.46E-03
31	GO:0016298: lipase activity	6.54E-03
32	GO:0052689: carboxylic ester hydrolase activity	6.73E-03
33	GO:0003712: transcription cofactor activity	7.60E-03
34	GO:0008146: sulfotransferase activity	7.60E-03
35	GO:0016874: ligase activity	8.47E-03
36	GO:0031418: L-ascorbic acid binding	8.81E-03
37	GO:0005528: FK506 binding	8.81E-03
38	GO:0005345: purine nucleobase transmembrane transporter activity	9.44E-03
39	GO:0033612: receptor serine/threonine kinase binding	1.01E-02
40	GO:0005199: structural constituent of cell wall	1.43E-02
41	GO:0000156: phosphorelay response regulator activity	1.82E-02
42	GO:0102483: scopolin beta-glucosidase activity	2.42E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	2.47E-02
44	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.89E-02
45	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.08E-02
46	GO:0003993: acid phosphatase activity	3.18E-02
47	GO:0008422: beta-glucosidase activity	3.28E-02
48	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.28E-02
49	GO:0042393: histone binding	3.38E-02
50	GO:0042803: protein homodimerization activity	3.76E-02
51	GO:0043621: protein self-association	3.91E-02
52	GO:0004722: protein serine/threonine phosphatase activity	3.93E-02
53	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.12E-02
54	GO:0003690: double-stranded DNA binding	4.68E-02
55	GO:0003777: microtubule motor activity	4.91E-02
56	GO:0031625: ubiquitin protein ligase binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0030139: endocytic vesicle	6.25E-04
2	GO:0032585: multivesicular body membrane	8.93E-04
3	GO:0009986: cell surface	2.61E-03
4	GO:0000783: nuclear telomere cap complex	3.46E-03
5	GO:0030095: chloroplast photosystem II	7.02E-03
6	GO:0009654: photosystem II oxygen evolving complex	9.44E-03
7	GO:0009543: chloroplast thylakoid lumen	1.13E-02
8	GO:0019898: extrinsic component of membrane	1.58E-02
9	GO:0030529: intracellular ribonucleoprotein complex	2.16E-02
10	GO:0000151: ubiquitin ligase complex	2.61E-02
11	GO:0031977: thylakoid lumen	3.49E-02
12	GO:0090406: pollen tube	3.69E-02
13	GO:0043231: intracellular membrane-bounded organelle	4.86E-02