Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G45190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
2GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
3GO:0007638: mechanosensory behavior0.00E+00
4GO:1905177: tracheary element differentiation0.00E+00
5GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
6GO:0070979: protein K11-linked ubiquitination0.00E+00
7GO:1905421: regulation of plant organ morphogenesis0.00E+00
8GO:2000505: regulation of energy homeostasis0.00E+00
9GO:2000469: negative regulation of peroxidase activity0.00E+00
10GO:0010081: regulation of inflorescence meristem growth0.00E+00
11GO:0030155: regulation of cell adhesion0.00E+00
12GO:0017038: protein import0.00E+00
13GO:0009733: response to auxin1.52E-07
14GO:0046620: regulation of organ growth2.01E-07
15GO:0045038: protein import into chloroplast thylakoid membrane1.91E-06
16GO:0040008: regulation of growth9.22E-06
17GO:0009734: auxin-activated signaling pathway1.88E-05
18GO:1900865: chloroplast RNA modification3.92E-05
19GO:0016556: mRNA modification5.16E-05
20GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.28E-05
21GO:0010207: photosystem II assembly1.17E-04
22GO:0016123: xanthophyll biosynthetic process1.42E-04
23GO:0015995: chlorophyll biosynthetic process1.56E-04
24GO:0007275: multicellular organism development2.80E-04
25GO:0030307: positive regulation of cell growth3.54E-04
26GO:0043266: regulation of potassium ion transport3.89E-04
27GO:0010480: microsporocyte differentiation3.89E-04
28GO:0010080: regulation of floral meristem growth3.89E-04
29GO:2000021: regulation of ion homeostasis3.89E-04
30GO:0051247: positive regulation of protein metabolic process3.89E-04
31GO:1902458: positive regulation of stomatal opening3.89E-04
32GO:2000905: negative regulation of starch metabolic process3.89E-04
33GO:0006419: alanyl-tRNA aminoacylation3.89E-04
34GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.89E-04
35GO:0000025: maltose catabolic process3.89E-04
36GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process3.89E-04
37GO:0016117: carotenoid biosynthetic process3.96E-04
38GO:0009926: auxin polar transport4.20E-04
39GO:0009664: plant-type cell wall organization5.99E-04
40GO:0006779: porphyrin-containing compound biosynthetic process7.68E-04
41GO:0009828: plant-type cell wall loosening8.10E-04
42GO:0048255: mRNA stabilization8.44E-04
43GO:1900871: chloroplast mRNA modification8.44E-04
44GO:0009786: regulation of asymmetric cell division8.44E-04
45GO:1903426: regulation of reactive oxygen species biosynthetic process8.44E-04
46GO:2000123: positive regulation of stomatal complex development8.44E-04
47GO:0060359: response to ammonium ion8.44E-04
48GO:0006782: protoporphyrinogen IX biosynthetic process8.94E-04
49GO:0010027: thylakoid membrane organization1.01E-03
50GO:0005983: starch catabolic process1.17E-03
51GO:0009725: response to hormone1.33E-03
52GO:0031145: anaphase-promoting complex-dependent catabolic process1.37E-03
53GO:0010022: meristem determinacy1.37E-03
54GO:0010623: programmed cell death involved in cell development1.37E-03
55GO:0080055: low-affinity nitrate transport1.37E-03
56GO:0006696: ergosterol biosynthetic process1.37E-03
57GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.37E-03
58GO:0090153: regulation of sphingolipid biosynthetic process1.37E-03
59GO:0043157: response to cation stress1.37E-03
60GO:0033591: response to L-ascorbic acid1.37E-03
61GO:0048281: inflorescence morphogenesis1.37E-03
62GO:0048586: regulation of long-day photoperiodism, flowering1.37E-03
63GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.97E-03
64GO:0046739: transport of virus in multicellular host1.97E-03
65GO:0031048: chromatin silencing by small RNA1.97E-03
66GO:0010148: transpiration1.97E-03
67GO:1990019: protein storage vacuole organization1.97E-03
68GO:2001141: regulation of RNA biosynthetic process1.97E-03
69GO:0051513: regulation of monopolar cell growth1.97E-03
70GO:0007231: osmosensory signaling pathway1.97E-03
71GO:0030071: regulation of mitotic metaphase/anaphase transition1.97E-03
72GO:0051639: actin filament network formation1.97E-03
73GO:0010306: rhamnogalacturonan II biosynthetic process1.97E-03
74GO:0019048: modulation by virus of host morphology or physiology1.97E-03
75GO:0015979: photosynthesis2.18E-03
76GO:0010431: seed maturation2.52E-03
77GO:0051567: histone H3-K9 methylation2.65E-03
78GO:0010508: positive regulation of autophagy2.65E-03
79GO:0008295: spermidine biosynthetic process2.65E-03
80GO:0010109: regulation of photosynthesis2.65E-03
81GO:0051764: actin crosslink formation2.65E-03
82GO:0009765: photosynthesis, light harvesting2.65E-03
83GO:2000306: positive regulation of photomorphogenesis2.65E-03
84GO:0006109: regulation of carbohydrate metabolic process2.65E-03
85GO:0033500: carbohydrate homeostasis2.65E-03
86GO:2000038: regulation of stomatal complex development2.65E-03
87GO:0006730: one-carbon metabolic process2.76E-03
88GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.01E-03
89GO:0016120: carotene biosynthetic process3.40E-03
90GO:0010236: plastoquinone biosynthetic process3.40E-03
91GO:0048497: maintenance of floral organ identity3.40E-03
92GO:0032876: negative regulation of DNA endoreduplication3.40E-03
93GO:0000304: response to singlet oxygen3.40E-03
94GO:0080110: sporopollenin biosynthetic process3.40E-03
95GO:0010375: stomatal complex patterning3.40E-03
96GO:0010087: phloem or xylem histogenesis3.83E-03
97GO:0010305: leaf vascular tissue pattern formation4.13E-03
98GO:0048868: pollen tube development4.13E-03
99GO:0016458: gene silencing4.20E-03
100GO:0018258: protein O-linked glycosylation via hydroxyproline4.20E-03
101GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione4.20E-03
102GO:0010405: arabinogalactan protein metabolic process4.20E-03
103GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.20E-03
104GO:0009959: negative gravitropism4.20E-03
105GO:0006555: methionine metabolic process4.20E-03
106GO:0009913: epidermal cell differentiation4.20E-03
107GO:0016554: cytidine to uridine editing4.20E-03
108GO:0009646: response to absence of light4.44E-03
109GO:0009826: unidimensional cell growth4.82E-03
110GO:0030488: tRNA methylation5.06E-03
111GO:0080086: stamen filament development5.06E-03
112GO:0071333: cellular response to glucose stimulus5.06E-03
113GO:0048437: floral organ development5.98E-03
114GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.98E-03
115GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.98E-03
116GO:0006400: tRNA modification5.98E-03
117GO:0010103: stomatal complex morphogenesis5.98E-03
118GO:0070370: cellular heat acclimation5.98E-03
119GO:0007267: cell-cell signaling6.57E-03
120GO:0006605: protein targeting6.95E-03
121GO:0032875: regulation of DNA endoreduplication6.95E-03
122GO:2000070: regulation of response to water deprivation6.95E-03
123GO:0048564: photosystem I assembly6.95E-03
124GO:0007186: G-protein coupled receptor signaling pathway7.98E-03
125GO:0010497: plasmodesmata-mediated intercellular transport7.98E-03
126GO:0009657: plastid organization7.98E-03
127GO:0071482: cellular response to light stimulus7.98E-03
128GO:0015996: chlorophyll catabolic process7.98E-03
129GO:0001558: regulation of cell growth7.98E-03
130GO:0048507: meristem development9.05E-03
131GO:0000373: Group II intron splicing9.05E-03
132GO:0006098: pentose-phosphate shunt9.05E-03
133GO:0009416: response to light stimulus9.37E-03
134GO:0009086: methionine biosynthetic process1.02E-02
135GO:0031425: chloroplast RNA processing1.02E-02
136GO:0009638: phototropism1.02E-02
137GO:0035999: tetrahydrofolate interconversion1.02E-02
138GO:0042761: very long-chain fatty acid biosynthetic process1.02E-02
139GO:0071555: cell wall organization1.11E-02
140GO:0006535: cysteine biosynthetic process from serine1.14E-02
141GO:0030422: production of siRNA involved in RNA interference1.14E-02
142GO:0048829: root cap development1.14E-02
143GO:0009641: shade avoidance1.14E-02
144GO:0006949: syncytium formation1.14E-02
145GO:0010629: negative regulation of gene expression1.14E-02
146GO:0009299: mRNA transcription1.14E-02
147GO:0009451: RNA modification1.25E-02
148GO:0043085: positive regulation of catalytic activity1.26E-02
149GO:0009773: photosynthetic electron transport in photosystem I1.26E-02
150GO:0006352: DNA-templated transcription, initiation1.26E-02
151GO:0006415: translational termination1.26E-02
152GO:0048229: gametophyte development1.26E-02
153GO:0006816: calcium ion transport1.26E-02
154GO:0034599: cellular response to oxidative stress1.28E-02
155GO:0045037: protein import into chloroplast stroma1.39E-02
156GO:0010582: floral meristem determinacy1.39E-02
157GO:0006839: mitochondrial transport1.40E-02
158GO:0010628: positive regulation of gene expression1.52E-02
159GO:0006006: glucose metabolic process1.52E-02
160GO:0010075: regulation of meristem growth1.52E-02
161GO:0006094: gluconeogenesis1.52E-02
162GO:0010588: cotyledon vascular tissue pattern formation1.52E-02
163GO:2000012: regulation of auxin polar transport1.52E-02
164GO:0009934: regulation of meristem structural organization1.65E-02
165GO:0009965: leaf morphogenesis1.78E-02
166GO:0010030: positive regulation of seed germination1.79E-02
167GO:0070588: calcium ion transmembrane transport1.79E-02
168GO:0010025: wax biosynthetic process1.94E-02
169GO:0051017: actin filament bundle assembly2.08E-02
170GO:0019344: cysteine biosynthetic process2.08E-02
171GO:0009944: polarity specification of adaxial/abaxial axis2.08E-02
172GO:0009658: chloroplast organization2.11E-02
173GO:0051302: regulation of cell division2.24E-02
174GO:0008299: isoprenoid biosynthetic process2.24E-02
175GO:0048511: rhythmic process2.39E-02
176GO:0031408: oxylipin biosynthetic process2.39E-02
177GO:0006306: DNA methylation2.39E-02
178GO:0005975: carbohydrate metabolic process2.46E-02
179GO:0006096: glycolytic process2.53E-02
180GO:0030245: cellulose catabolic process2.55E-02
181GO:0010017: red or far-red light signaling pathway2.55E-02
182GO:0048316: seed development2.62E-02
183GO:0001944: vasculature development2.71E-02
184GO:0010082: regulation of root meristem growth2.71E-02
185GO:0009740: gibberellic acid mediated signaling pathway2.87E-02
186GO:0006284: base-excision repair2.88E-02
187GO:0019722: calcium-mediated signaling2.88E-02
188GO:0009561: megagametogenesis2.88E-02
189GO:0010089: xylem development2.88E-02
190GO:0010584: pollen exine formation2.88E-02
191GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.05E-02
192GO:0006468: protein phosphorylation3.20E-02
193GO:0080022: primary root development3.22E-02
194GO:0048653: anther development3.22E-02
195GO:0042631: cellular response to water deprivation3.22E-02
196GO:0009742: brassinosteroid mediated signaling pathway3.23E-02
197GO:0006662: glycerol ether metabolic process3.40E-02
198GO:0010182: sugar mediated signaling pathway3.40E-02
199GO:0006342: chromatin silencing3.40E-02
200GO:0009958: positive gravitropism3.40E-02
201GO:0048544: recognition of pollen3.58E-02
202GO:0007018: microtubule-based movement3.58E-02
203GO:0042752: regulation of circadian rhythm3.58E-02
204GO:0048825: cotyledon development3.76E-02
205GO:0000302: response to reactive oxygen species3.95E-02
206GO:0009845: seed germination4.12E-02
207GO:0032502: developmental process4.14E-02
208GO:0009630: gravitropism4.14E-02
209GO:0010583: response to cyclopentenone4.14E-02
210GO:0016032: viral process4.14E-02
211GO:0010090: trichome morphogenesis4.33E-02
212GO:0006464: cellular protein modification process4.53E-02
213GO:0010252: auxin homeostasis4.53E-02
214GO:0006397: mRNA processing4.71E-02
215GO:0051607: defense response to virus4.92E-02
RankGO TermAdjusted P value
1GO:0045435: lycopene epsilon cyclase activity0.00E+00
2GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
3GO:0046905: phytoene synthase activity0.00E+00
4GO:0010355: homogentisate farnesyltransferase activity0.00E+00
5GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
6GO:0005048: signal sequence binding0.00E+00
7GO:0010356: homogentisate geranylgeranyltransferase activity0.00E+00
8GO:0010357: homogentisate solanesyltransferase activity0.00E+00
9GO:0001872: (1->3)-beta-D-glucan binding5.16E-05
10GO:0019199: transmembrane receptor protein kinase activity9.11E-05
11GO:0004462: lactoylglutathione lyase activity2.03E-04
12GO:0050308: sugar-phosphatase activity3.89E-04
13GO:0019203: carbohydrate phosphatase activity3.89E-04
14GO:0004813: alanine-tRNA ligase activity3.89E-04
15GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity3.89E-04
16GO:0008158: hedgehog receptor activity3.89E-04
17GO:0005080: protein kinase C binding3.89E-04
18GO:0051996: squalene synthase activity3.89E-04
19GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.89E-04
20GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.89E-04
21GO:0050139: nicotinate-N-glucosyltransferase activity3.89E-04
22GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity3.89E-04
23GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.89E-04
24GO:0005227: calcium activated cation channel activity3.89E-04
25GO:0004134: 4-alpha-glucanotransferase activity3.89E-04
26GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity3.89E-04
27GO:0004310: farnesyl-diphosphate farnesyltransferase activity8.44E-04
28GO:0050017: L-3-cyanoalanine synthase activity8.44E-04
29GO:0017118: lipoyltransferase activity8.44E-04
30GO:0004326: tetrahydrofolylpolyglutamate synthase activity8.44E-04
31GO:0043425: bHLH transcription factor binding8.44E-04
32GO:0004766: spermidine synthase activity8.44E-04
33GO:0004519: endonuclease activity1.05E-03
34GO:0003913: DNA photolyase activity1.37E-03
35GO:0004557: alpha-galactosidase activity1.37E-03
36GO:0016805: dipeptidase activity1.37E-03
37GO:0070402: NADPH binding1.37E-03
38GO:0052692: raffinose alpha-galactosidase activity1.37E-03
39GO:0080054: low-affinity nitrate transmembrane transporter activity1.37E-03
40GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups1.37E-03
41GO:0015462: ATPase-coupled protein transmembrane transporter activity1.37E-03
42GO:0004180: carboxypeptidase activity1.37E-03
43GO:0016149: translation release factor activity, codon specific1.97E-03
44GO:0035197: siRNA binding1.97E-03
45GO:0016851: magnesium chelatase activity1.97E-03
46GO:0005528: FK506 binding2.08E-03
47GO:0042277: peptide binding2.65E-03
48GO:0001053: plastid sigma factor activity2.65E-03
49GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed2.65E-03
50GO:0016987: sigma factor activity2.65E-03
51GO:0016773: phosphotransferase activity, alcohol group as acceptor3.40E-03
52GO:0008725: DNA-3-methyladenine glycosylase activity3.40E-03
53GO:0004130: cytochrome-c peroxidase activity4.20E-03
54GO:0016688: L-ascorbate peroxidase activity4.20E-03
55GO:2001070: starch binding4.20E-03
56GO:1990714: hydroxyproline O-galactosyltransferase activity4.20E-03
57GO:0004332: fructose-bisphosphate aldolase activity4.20E-03
58GO:0004124: cysteine synthase activity5.06E-03
59GO:0004017: adenylate kinase activity5.06E-03
60GO:0009881: photoreceptor activity5.98E-03
61GO:0008312: 7S RNA binding6.95E-03
62GO:0030247: polysaccharide binding8.71E-03
63GO:0008138: protein tyrosine/serine/threonine phosphatase activity9.05E-03
64GO:0003747: translation release factor activity9.05E-03
65GO:0004674: protein serine/threonine kinase activity1.00E-02
66GO:0030955: potassium ion binding1.02E-02
67GO:0004743: pyruvate kinase activity1.02E-02
68GO:0008047: enzyme activator activity1.14E-02
69GO:0004161: dimethylallyltranstransferase activity1.26E-02
70GO:0005089: Rho guanyl-nucleotide exchange factor activity1.26E-02
71GO:0000976: transcription regulatory region sequence-specific DNA binding1.39E-02
72GO:0000049: tRNA binding1.39E-02
73GO:0004521: endoribonuclease activity1.39E-02
74GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.52E-02
75GO:0031072: heat shock protein binding1.52E-02
76GO:0005262: calcium channel activity1.52E-02
77GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.65E-02
78GO:0008266: poly(U) RNA binding1.65E-02
79GO:0008146: sulfotransferase activity1.79E-02
80GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.85E-02
81GO:0051536: iron-sulfur cluster binding2.08E-02
82GO:0004857: enzyme inhibitor activity2.08E-02
83GO:0033612: receptor serine/threonine kinase binding2.39E-02
84GO:0003964: RNA-directed DNA polymerase activity2.39E-02
85GO:0030570: pectate lyase activity2.71E-02
86GO:0008810: cellulase activity2.71E-02
87GO:0047134: protein-disulfide reductase activity3.05E-02
88GO:0003723: RNA binding3.27E-02
89GO:0050662: coenzyme binding3.58E-02
90GO:0004791: thioredoxin-disulfide reductase activity3.58E-02
91GO:0016853: isomerase activity3.58E-02
92GO:0004871: signal transducer activity3.67E-02
93GO:0019901: protein kinase binding3.76E-02
94GO:0004872: receptor activity3.76E-02
95GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.92E-02
96GO:0016829: lyase activity4.12E-02
97GO:0030170: pyridoxal phosphate binding4.23E-02
98GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.33E-02
99GO:0051015: actin filament binding4.33E-02
100GO:0016759: cellulose synthase activity4.53E-02
101GO:0008483: transaminase activity4.72E-02
102GO:0016491: oxidoreductase activity4.90E-02
103GO:0016597: amino acid binding4.92E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.11E-13
2GO:0009570: chloroplast stroma5.08E-09
3GO:0080085: signal recognition particle, chloroplast targeting6.76E-06
4GO:0009534: chloroplast thylakoid8.14E-05
5GO:0009535: chloroplast thylakoid membrane1.34E-04
6GO:0009654: photosystem II oxygen evolving complex2.19E-04
7GO:0005886: plasma membrane2.36E-04
8GO:0009543: chloroplast thylakoid lumen3.03E-04
9GO:0005786: signal recognition particle, endoplasmic reticulum targeting5.43E-04
10GO:0019898: extrinsic component of membrane5.82E-04
11GO:0009941: chloroplast envelope6.46E-04
12GO:0010319: stromule8.73E-04
13GO:0009579: thylakoid1.18E-03
14GO:0010007: magnesium chelatase complex1.37E-03
15GO:0030139: endocytic vesicle1.37E-03
16GO:0009528: plastid inner membrane1.37E-03
17GO:0019897: extrinsic component of plasma membrane1.37E-03
18GO:0031969: chloroplast membrane1.73E-03
19GO:0032432: actin filament bundle1.97E-03
20GO:0005719: nuclear euchromatin1.97E-03
21GO:0032585: multivesicular body membrane1.97E-03
22GO:0031977: thylakoid lumen2.37E-03
23GO:0009527: plastid outer membrane2.65E-03
24GO:0046658: anchored component of plasma membrane4.02E-03
25GO:0009986: cell surface5.98E-03
26GO:0031225: anchored component of membrane6.67E-03
27GO:0009501: amyloplast6.95E-03
28GO:0030529: intracellular ribonucleoprotein complex7.39E-03
29GO:0005680: anaphase-promoting complex9.05E-03
30GO:0016604: nuclear body1.02E-02
31GO:0015030: Cajal body1.02E-02
32GO:0005884: actin filament1.26E-02
33GO:0000311: plastid large ribosomal subunit1.39E-02
34GO:0043231: intracellular membrane-bounded organelle1.48E-02
35GO:0005578: proteinaceous extracellular matrix1.52E-02
36GO:0030095: chloroplast photosystem II1.65E-02
37GO:0043234: protein complex1.94E-02
38GO:0009532: plastid stroma2.39E-02
39GO:0005871: kinesin complex3.05E-02
40GO:0005623: cell3.92E-02
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Gene type



Gene DE type