co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G44640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
2	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
3	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
4	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
5	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
6	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
7	GO:0042407: cristae formation	0.00E+00
8	GO:0007638: mechanosensory behavior	0.00E+00
9	GO:0006573: valine metabolic process	0.00E+00
10	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
11	GO:0045184: establishment of protein localization	0.00E+00
12	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
13	GO:0070125: mitochondrial translational elongation	0.00E+00
14	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
15	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
16	GO:0042352: GDP-L-fucose salvage	0.00E+00
17	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
18	GO:0017038: protein import	0.00E+00
19	GO:0061157: mRNA destabilization	0.00E+00
20	GO:0002184: cytoplasmic translational termination	0.00E+00
21	GO:0019323: pentose catabolic process	0.00E+00
22	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
23	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
24	GO:0015995: chlorophyll biosynthetic process	5.99E-08
25	GO:0009658: chloroplast organization	7.90E-07
26	GO:0018026: peptidyl-lysine monomethylation	2.91E-05
27	GO:1902326: positive regulation of chlorophyll biosynthetic process	2.91E-05
28	GO:1901259: chloroplast rRNA processing	4.28E-05
29	GO:0010020: chloroplast fission	4.61E-05
30	GO:0010027: thylakoid membrane organization	1.12E-04
31	GO:0046739: transport of virus in multicellular host	1.89E-04
32	GO:0016123: xanthophyll biosynthetic process	4.69E-04
33	GO:2000012: regulation of auxin polar transport	4.78E-04
34	GO:0009793: embryo development ending in seed dormancy	5.93E-04
35	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.50E-04
36	GO:0009959: negative gravitropism	6.50E-04
37	GO:0042793: transcription from plastid promoter	6.50E-04
38	GO:0009790: embryo development	8.13E-04
39	GO:0043266: regulation of potassium ion transport	8.35E-04
40	GO:0010442: guard cell morphogenesis	8.35E-04
41	GO:0010063: positive regulation of trichoblast fate specification	8.35E-04
42	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	8.35E-04
43	GO:0010480: microsporocyte differentiation	8.35E-04
44	GO:1904964: positive regulation of phytol biosynthetic process	8.35E-04
45	GO:0042759: long-chain fatty acid biosynthetic process	8.35E-04
46	GO:0005980: glycogen catabolic process	8.35E-04
47	GO:0006551: leucine metabolic process	8.35E-04
48	GO:0030198: extracellular matrix organization	8.35E-04
49	GO:0006438: valyl-tRNA aminoacylation	8.35E-04
50	GO:0042371: vitamin K biosynthetic process	8.35E-04
51	GO:0043686: co-translational protein modification	8.35E-04
52	GO:2000021: regulation of ion homeostasis	8.35E-04
53	GO:0090558: plant epidermis development	8.35E-04
54	GO:0035987: endodermal cell differentiation	8.35E-04
55	GO:0043007: maintenance of rDNA	8.35E-04
56	GO:1902458: positive regulation of stomatal opening	8.35E-04
57	GO:0015904: tetracycline transport	8.35E-04
58	GO:0005991: trehalose metabolic process	8.35E-04
59	GO:0048363: mucilage pectin metabolic process	8.35E-04
60	GO:0070509: calcium ion import	8.35E-04
61	GO:0044262: cellular carbohydrate metabolic process	8.35E-04
62	GO:0042659: regulation of cell fate specification	8.35E-04
63	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	8.35E-04
64	GO:0000025: maltose catabolic process	8.35E-04
65	GO:1904966: positive regulation of vitamin E biosynthetic process	8.35E-04
66	GO:0009099: valine biosynthetic process	8.59E-04
67	GO:0030488: tRNA methylation	8.59E-04
68	GO:0042372: phylloquinone biosynthetic process	8.59E-04
69	GO:0009082: branched-chain amino acid biosynthetic process	8.59E-04
70	GO:0006418: tRNA aminoacylation for protein translation	9.75E-04
71	GO:0040008: regulation of growth	1.03E-03
72	GO:0048437: floral organ development	1.09E-03
73	GO:0009451: RNA modification	1.19E-03
74	GO:0032544: plastid translation	1.66E-03
75	GO:0010497: plasmodesmata-mediated intercellular transport	1.66E-03
76	GO:0009657: plastid organization	1.66E-03
77	GO:0009097: isoleucine biosynthetic process	1.66E-03
78	GO:0009742: brassinosteroid mediated signaling pathway	1.79E-03
79	GO:0006432: phenylalanyl-tRNA aminoacylation	1.81E-03
80	GO:0060359: response to ammonium ion	1.81E-03
81	GO:0048255: mRNA stabilization	1.81E-03
82	GO:0071668: plant-type cell wall assembly	1.81E-03
83	GO:1904143: positive regulation of carotenoid biosynthetic process	1.81E-03
84	GO:0080009: mRNA methylation	1.81E-03
85	GO:0009786: regulation of asymmetric cell division	1.81E-03
86	GO:0031648: protein destabilization	1.81E-03
87	GO:0001682: tRNA 5'-leader removal	1.81E-03
88	GO:0006423: cysteinyl-tRNA aminoacylation	1.81E-03
89	GO:0008616: queuosine biosynthetic process	1.81E-03
90	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.81E-03
91	GO:0006568: tryptophan metabolic process	1.81E-03
92	GO:2000123: positive regulation of stomatal complex development	1.81E-03
93	GO:0010024: phytochromobilin biosynthetic process	1.81E-03
94	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.81E-03
95	GO:1900871: chloroplast mRNA modification	1.81E-03
96	GO:0052541: plant-type cell wall cellulose metabolic process	1.81E-03
97	GO:0006662: glycerol ether metabolic process	2.08E-03
98	GO:0010182: sugar mediated signaling pathway	2.08E-03
99	GO:0010305: leaf vascular tissue pattern formation	2.08E-03
100	GO:0009098: leucine biosynthetic process	2.37E-03
101	GO:1900865: chloroplast RNA modification	2.37E-03
102	GO:0031425: chloroplast RNA processing	2.37E-03
103	GO:0006779: porphyrin-containing compound biosynthetic process	2.37E-03
104	GO:0006782: protoporphyrinogen IX biosynthetic process	2.77E-03
105	GO:0006788: heme oxidation	3.00E-03
106	GO:0043157: response to cation stress	3.00E-03
107	GO:0006954: inflammatory response	3.00E-03
108	GO:0033591: response to L-ascorbic acid	3.00E-03
109	GO:0090708: specification of plant organ axis polarity	3.00E-03
110	GO:0009773: photosynthetic electron transport in photosystem I	3.21E-03
111	GO:0005983: starch catabolic process	3.69E-03
112	GO:0009416: response to light stimulus	3.75E-03
113	GO:0010588: cotyledon vascular tissue pattern formation	4.20E-03
114	GO:0019048: modulation by virus of host morphology or physiology	4.37E-03
115	GO:0043572: plastid fission	4.37E-03
116	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.37E-03
117	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	4.37E-03
118	GO:0031048: chromatin silencing by small RNA	4.37E-03
119	GO:0016556: mRNA modification	4.37E-03
120	GO:0010071: root meristem specification	4.37E-03
121	GO:0007231: osmosensory signaling pathway	4.37E-03
122	GO:0009052: pentose-phosphate shunt, non-oxidative branch	4.37E-03
123	GO:0009102: biotin biosynthetic process	4.37E-03
124	GO:0009647: skotomorphogenesis	4.37E-03
125	GO:0010306: rhamnogalacturonan II biosynthetic process	4.37E-03
126	GO:0010731: protein glutathionylation	4.37E-03
127	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.46E-03
128	GO:0009733: response to auxin	4.50E-03
129	GO:0010207: photosystem II assembly	4.75E-03
130	GO:0048367: shoot system development	5.32E-03
131	GO:0070588: calcium ion transmembrane transport	5.34E-03
132	GO:0022622: root system development	5.92E-03
133	GO:0006221: pyrimidine nucleotide biosynthetic process	5.92E-03
134	GO:0051567: histone H3-K9 methylation	5.92E-03
135	GO:0006808: regulation of nitrogen utilization	5.92E-03
136	GO:0008295: spermidine biosynthetic process	5.92E-03
137	GO:0010109: regulation of photosynthesis	5.92E-03
138	GO:0030104: water homeostasis	5.92E-03
139	GO:0033500: carbohydrate homeostasis	5.92E-03
140	GO:0042274: ribosomal small subunit biogenesis	5.92E-03
141	GO:2000038: regulation of stomatal complex development	5.92E-03
142	GO:0009765: photosynthesis, light harvesting	5.92E-03
143	GO:0006071: glycerol metabolic process	5.96E-03
144	GO:0045454: cell redox homeostasis	5.96E-03
145	GO:0009734: auxin-activated signaling pathway	6.25E-03
146	GO:0010236: plastoquinone biosynthetic process	7.62E-03
147	GO:0045038: protein import into chloroplast thylakoid membrane	7.62E-03
148	GO:0031365: N-terminal protein amino acid modification	7.62E-03
149	GO:0016120: carotene biosynthetic process	7.62E-03
150	GO:0000304: response to singlet oxygen	7.62E-03
151	GO:0032543: mitochondrial translation	7.62E-03
152	GO:0010375: stomatal complex patterning	7.62E-03
153	GO:0016042: lipid catabolic process	8.50E-03
154	GO:0006730: one-carbon metabolic process	8.84E-03
155	GO:0034599: cellular response to oxidative stress	8.90E-03
156	GO:0016554: cytidine to uridine editing	9.47E-03
157	GO:0016458: gene silencing	9.47E-03
158	GO:0032973: amino acid export	9.47E-03
159	GO:0010405: arabinogalactan protein metabolic process	9.47E-03
160	GO:0018258: protein O-linked glycosylation via hydroxyproline	9.47E-03
161	GO:0000741: karyogamy	9.47E-03
162	GO:0006655: phosphatidylglycerol biosynthetic process	9.47E-03
163	GO:1902456: regulation of stomatal opening	9.47E-03
164	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	9.47E-03
165	GO:0033365: protein localization to organelle	9.47E-03
166	GO:0009686: gibberellin biosynthetic process	9.67E-03
167	GO:0006631: fatty acid metabolic process	1.05E-02
168	GO:0042026: protein refolding	1.15E-02
169	GO:2000033: regulation of seed dormancy process	1.15E-02
170	GO:0080086: stamen filament development	1.15E-02
171	GO:0009648: photoperiodism	1.15E-02
172	GO:2000067: regulation of root morphogenesis	1.15E-02
173	GO:0006458: 'de novo' protein folding	1.15E-02
174	GO:0017148: negative regulation of translation	1.15E-02
175	GO:0048280: vesicle fusion with Golgi apparatus	1.15E-02
176	GO:0048366: leaf development	1.23E-02
177	GO:0080022: primary root development	1.24E-02
178	GO:0008033: tRNA processing	1.24E-02
179	GO:0010087: phloem or xylem histogenesis	1.24E-02
180	GO:0010197: polar nucleus fusion	1.34E-02
181	GO:0009958: positive gravitropism	1.34E-02
182	GO:0030307: positive regulation of cell growth	1.36E-02
183	GO:0032880: regulation of protein localization	1.36E-02
184	GO:0010161: red light signaling pathway	1.36E-02
185	GO:0048528: post-embryonic root development	1.36E-02
186	GO:0009772: photosynthetic electron transport in photosystem II	1.36E-02
187	GO:0043090: amino acid import	1.36E-02
188	GO:0010444: guard mother cell differentiation	1.36E-02
189	GO:0009646: response to absence of light	1.44E-02
190	GO:0006508: proteolysis	1.56E-02
191	GO:0006605: protein targeting	1.59E-02
192	GO:0010078: maintenance of root meristem identity	1.59E-02
193	GO:2000070: regulation of response to water deprivation	1.59E-02
194	GO:0055075: potassium ion homeostasis	1.59E-02
195	GO:0000105: histidine biosynthetic process	1.59E-02
196	GO:0046620: regulation of organ growth	1.59E-02
197	GO:0009231: riboflavin biosynthetic process	1.59E-02
198	GO:0006353: DNA-templated transcription, termination	1.59E-02
199	GO:0070413: trehalose metabolism in response to stress	1.59E-02
200	GO:0001522: pseudouridine synthesis	1.59E-02
201	GO:0007155: cell adhesion	1.59E-02
202	GO:0048564: photosystem I assembly	1.59E-02
203	GO:0015979: photosynthesis	1.69E-02
204	GO:0032502: developmental process	1.77E-02
205	GO:0006526: arginine biosynthetic process	1.83E-02
206	GO:0007186: G-protein coupled receptor signaling pathway	1.83E-02
207	GO:0043562: cellular response to nitrogen levels	1.83E-02
208	GO:0010099: regulation of photomorphogenesis	1.83E-02
209	GO:0015996: chlorophyll catabolic process	1.83E-02
210	GO:0010100: negative regulation of photomorphogenesis	1.83E-02
211	GO:1901657: glycosyl compound metabolic process	1.89E-02
212	GO:0007166: cell surface receptor signaling pathway	1.90E-02
213	GO:0006783: heme biosynthetic process	2.08E-02
214	GO:0000373: Group II intron splicing	2.08E-02
215	GO:0048507: meristem development	2.08E-02
216	GO:0000902: cell morphogenesis	2.08E-02
217	GO:0051865: protein autoubiquitination	2.08E-02
218	GO:0080144: amino acid homeostasis	2.08E-02
219	GO:0046685: response to arsenic-containing substance	2.08E-02
220	GO:0046916: cellular transition metal ion homeostasis	2.08E-02
221	GO:0051607: defense response to virus	2.27E-02
222	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.34E-02
223	GO:2000280: regulation of root development	2.34E-02
224	GO:0009638: phototropism	2.34E-02
225	GO:0043067: regulation of programmed cell death	2.34E-02
226	GO:0010162: seed dormancy process	2.62E-02
227	GO:0006896: Golgi to vacuole transport	2.62E-02
228	GO:0030422: production of siRNA involved in RNA interference	2.62E-02
229	GO:0048829: root cap development	2.62E-02
230	GO:0045036: protein targeting to chloroplast	2.62E-02
231	GO:0009641: shade avoidance	2.62E-02
232	GO:0009299: mRNA transcription	2.62E-02
233	GO:0006397: mRNA processing	2.81E-02
234	GO:0006816: calcium ion transport	2.90E-02
235	GO:0048229: gametophyte development	2.90E-02
236	GO:0006415: translational termination	2.90E-02
237	GO:0009684: indoleacetic acid biosynthetic process	2.90E-02
238	GO:0019684: photosynthesis, light reaction	2.90E-02
239	GO:0009073: aromatic amino acid family biosynthetic process	2.90E-02
240	GO:0043085: positive regulation of catalytic activity	2.90E-02
241	GO:0009817: defense response to fungus, incompatible interaction	3.14E-02
242	GO:0048481: plant ovule development	3.14E-02
243	GO:0016024: CDP-diacylglycerol biosynthetic process	3.20E-02
244	GO:0045037: protein import into chloroplast stroma	3.20E-02
245	GO:0009813: flavonoid biosynthetic process	3.30E-02
246	GO:0006006: glucose metabolic process	3.51E-02
247	GO:0010102: lateral root morphogenesis	3.51E-02
248	GO:0050826: response to freezing	3.51E-02
249	GO:0009718: anthocyanin-containing compound biosynthetic process	3.51E-02
250	GO:0010075: regulation of meristem growth	3.51E-02
251	GO:0009691: cytokinin biosynthetic process	3.51E-02
252	GO:0009725: response to hormone	3.51E-02
253	GO:0009767: photosynthetic electron transport chain	3.51E-02
254	GO:0030048: actin filament-based movement	3.51E-02
255	GO:0010628: positive regulation of gene expression	3.51E-02
256	GO:0048527: lateral root development	3.63E-02
257	GO:0009266: response to temperature stimulus	3.82E-02
258	GO:0009934: regulation of meristem structural organization	3.82E-02
259	GO:0048467: gynoecium development	3.82E-02
260	GO:0055114: oxidation-reduction process	3.97E-02
261	GO:0016051: carbohydrate biosynthetic process	3.98E-02
262	GO:0045087: innate immune response	3.98E-02
263	GO:0090351: seedling development	4.14E-02
264	GO:0080188: RNA-directed DNA methylation	4.14E-02
265	GO:0010030: positive regulation of seed germination	4.14E-02
266	GO:0019853: L-ascorbic acid biosynthetic process	4.14E-02
267	GO:0006833: water transport	4.48E-02
268	GO:0010025: wax biosynthetic process	4.48E-02
269	GO:0000162: tryptophan biosynthetic process	4.48E-02
270	GO:0030001: metal ion transport	4.53E-02
271	GO:0006633: fatty acid biosynthetic process	4.68E-02
272	GO:0005992: trehalose biosynthetic process	4.82E-02
273	GO:0010187: negative regulation of seed germination	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0004823: leucine-tRNA ligase activity	0.00E+00
2	GO:0047661: amino-acid racemase activity	0.00E+00
3	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
4	GO:0050201: fucokinase activity	0.00E+00
5	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
6	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
7	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
8	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
9	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
10	GO:0015267: channel activity	0.00E+00
11	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
12	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
13	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
14	GO:0005201: extracellular matrix structural constituent	0.00E+00
15	GO:0071633: dihydroceramidase activity	0.00E+00
16	GO:0047341: fucose-1-phosphate guanylyltransferase activity	0.00E+00
17	GO:0004076: biotin synthase activity	0.00E+00
18	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
19	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
20	GO:0016630: protochlorophyllide reductase activity	2.91E-05
21	GO:0002161: aminoacyl-tRNA editing activity	9.27E-05
22	GO:0005504: fatty acid binding	9.27E-05
23	GO:0004176: ATP-dependent peptidase activity	1.27E-04
24	GO:0043023: ribosomal large subunit binding	1.89E-04
25	GO:0001872: (1->3)-beta-D-glucan binding	1.89E-04
26	GO:0003723: RNA binding	2.13E-04
27	GO:0016279: protein-lysine N-methyltransferase activity	3.15E-04
28	GO:0045430: chalcone isomerase activity	3.15E-04
29	GO:0008237: metallopeptidase activity	6.44E-04
30	GO:0005080: protein kinase C binding	8.35E-04
31	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	8.35E-04
32	GO:0080042: ADP-glucose pyrophosphohydrolase activity	8.35E-04
33	GO:0004832: valine-tRNA ligase activity	8.35E-04
34	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	8.35E-04
35	GO:0050308: sugar-phosphatase activity	8.35E-04
36	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	8.35E-04
37	GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity	8.35E-04
38	GO:0042586: peptide deformylase activity	8.35E-04
39	GO:0052381: tRNA dimethylallyltransferase activity	8.35E-04
40	GO:0010313: phytochrome binding	8.35E-04
41	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	8.35E-04
42	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	8.35E-04
43	GO:0050139: nicotinate-N-glucosyltransferase activity	8.35E-04
44	GO:0051777: ent-kaurenoate oxidase activity	8.35E-04
45	GO:0004856: xylulokinase activity	8.35E-04
46	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	8.35E-04
47	GO:0004134: 4-alpha-glucanotransferase activity	8.35E-04
48	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	8.35E-04
49	GO:0004645: phosphorylase activity	8.35E-04
50	GO:0004425: indole-3-glycerol-phosphate synthase activity	8.35E-04
51	GO:0009374: biotin binding	8.35E-04
52	GO:0016776: phosphotransferase activity, phosphate group as acceptor	8.35E-04
53	GO:0019203: carbohydrate phosphatase activity	8.35E-04
54	GO:0008184: glycogen phosphorylase activity	8.35E-04
55	GO:0003984: acetolactate synthase activity	8.35E-04
56	GO:0005528: FK506 binding	8.60E-04
57	GO:0047134: protein-disulfide reductase activity	1.70E-03
58	GO:0004812: aminoacyl-tRNA ligase activity	1.70E-03
59	GO:0008805: carbon-monoxide oxygenase activity	1.81E-03
60	GO:0008493: tetracycline transporter activity	1.81E-03
61	GO:0017118: lipoyltransferase activity	1.81E-03
62	GO:0004826: phenylalanine-tRNA ligase activity	1.81E-03
63	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.81E-03
64	GO:0003852: 2-isopropylmalate synthase activity	1.81E-03
65	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.81E-03
66	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.81E-03
67	GO:0043425: bHLH transcription factor binding	1.81E-03
68	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.81E-03
69	GO:0004766: spermidine synthase activity	1.81E-03
70	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.81E-03
71	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.81E-03
72	GO:0004817: cysteine-tRNA ligase activity	1.81E-03
73	GO:0004750: ribulose-phosphate 3-epimerase activity	1.81E-03
74	GO:0008479: queuine tRNA-ribosyltransferase activity	1.81E-03
75	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.00E-03
76	GO:0004791: thioredoxin-disulfide reductase activity	2.28E-03
77	GO:0070330: aromatase activity	3.00E-03
78	GO:0045174: glutathione dehydrogenase (ascorbate) activity	3.00E-03
79	GO:0017150: tRNA dihydrouridine synthase activity	3.00E-03
80	GO:0003913: DNA photolyase activity	3.00E-03
81	GO:0016805: dipeptidase activity	3.00E-03
82	GO:0004148: dihydrolipoyl dehydrogenase activity	3.00E-03
83	GO:0070402: NADPH binding	3.00E-03
84	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.00E-03
85	GO:0015462: ATPase-coupled protein transmembrane transporter activity	3.00E-03
86	GO:0004180: carboxypeptidase activity	3.00E-03
87	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.14E-03
88	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.23E-03
89	GO:0004519: endonuclease activity	3.56E-03
90	GO:0000049: tRNA binding	3.69E-03
91	GO:0031072: heat shock protein binding	4.20E-03
92	GO:0005262: calcium channel activity	4.20E-03
93	GO:0009982: pseudouridine synthase activity	4.20E-03
94	GO:0052656: L-isoleucine transaminase activity	4.37E-03
95	GO:0009041: uridylate kinase activity	4.37E-03
96	GO:0052654: L-leucine transaminase activity	4.37E-03
97	GO:0035197: siRNA binding	4.37E-03
98	GO:0016851: magnesium chelatase activity	4.37E-03
99	GO:0052655: L-valine transaminase activity	4.37E-03
100	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	4.37E-03
101	GO:0016149: translation release factor activity, codon specific	4.37E-03
102	GO:0008266: poly(U) RNA binding	4.75E-03
103	GO:0052689: carboxylic ester hydrolase activity	5.09E-03
104	GO:0004392: heme oxygenase (decyclizing) activity	5.92E-03
105	GO:0004084: branched-chain-amino-acid transaminase activity	5.92E-03
106	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	5.92E-03
107	GO:0019199: transmembrane receptor protein kinase activity	5.92E-03
108	GO:0004335: galactokinase activity	5.92E-03
109	GO:0004659: prenyltransferase activity	5.92E-03
110	GO:0043495: protein anchor	5.92E-03
111	GO:0004222: metalloendopeptidase activity	7.03E-03
112	GO:0015035: protein disulfide oxidoreductase activity	7.05E-03
113	GO:0016846: carbon-sulfur lyase activity	7.62E-03
114	GO:0016773: phosphotransferase activity, alcohol group as acceptor	7.62E-03
115	GO:0003989: acetyl-CoA carboxylase activity	7.62E-03
116	GO:0003959: NADPH dehydrogenase activity	7.62E-03
117	GO:0018685: alkane 1-monooxygenase activity	7.62E-03
118	GO:0005524: ATP binding	7.83E-03
119	GO:2001070: starch binding	9.47E-03
120	GO:1990714: hydroxyproline O-galactosyltransferase activity	9.47E-03
121	GO:0004526: ribonuclease P activity	9.47E-03
122	GO:0016208: AMP binding	9.47E-03
123	GO:0003727: single-stranded RNA binding	1.05E-02
124	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.15E-02
125	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.15E-02
126	GO:0008195: phosphatidate phosphatase activity	1.15E-02
127	GO:0043621: protein self-association	1.29E-02
128	GO:0019899: enzyme binding	1.36E-02
129	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.40E-02
130	GO:0004033: aldo-keto reductase (NADP) activity	1.59E-02
131	GO:0008173: RNA methyltransferase activity	1.83E-02
132	GO:0046914: transition metal ion binding	1.83E-02
133	GO:0003747: translation release factor activity	2.08E-02
134	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	2.08E-02
135	GO:0005200: structural constituent of cytoskeleton	2.14E-02
136	GO:0042802: identical protein binding	2.23E-02
137	GO:0016597: amino acid binding	2.27E-02
138	GO:0003824: catalytic activity	2.39E-02
139	GO:0003924: GTPase activity	2.62E-02
140	GO:0008047: enzyme activator activity	2.62E-02
141	GO:0015020: glucuronosyltransferase activity	2.62E-02
142	GO:0051082: unfolded protein binding	2.67E-02
143	GO:0102483: scopolin beta-glucosidase activity	2.83E-02
144	GO:0030247: polysaccharide binding	2.83E-02
145	GO:0008559: xenobiotic-transporting ATPase activity	2.90E-02
146	GO:0044183: protein binding involved in protein folding	2.90E-02
147	GO:0005525: GTP binding	2.91E-02
148	GO:0016788: hydrolase activity, acting on ester bonds	3.06E-02
149	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.14E-02
150	GO:0004521: endoribonuclease activity	3.20E-02
151	GO:0015266: protein channel activity	3.51E-02
152	GO:0004089: carbonate dehydratase activity	3.51E-02
153	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.82E-02
154	GO:0008083: growth factor activity	3.82E-02
155	GO:0003774: motor activity	3.82E-02
156	GO:0008146: sulfotransferase activity	4.14E-02
157	GO:0003993: acid phosphatase activity	4.16E-02
158	GO:0008422: beta-glucosidase activity	4.34E-02
159	GO:0051536: iron-sulfur cluster binding	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0005948: acetolactate synthase complex	0.00E+00
2	GO:0009507: chloroplast	1.12E-40
3	GO:0009570: chloroplast stroma	8.47E-28
4	GO:0009941: chloroplast envelope	1.10E-13
5	GO:0009534: chloroplast thylakoid	1.92E-09
6	GO:0009508: plastid chromosome	3.34E-08
7	GO:0009295: nucleoid	4.06E-07
8	GO:0031969: chloroplast membrane	1.55E-05
9	GO:0009535: chloroplast thylakoid membrane	2.30E-05
10	GO:0009536: plastid	1.27E-04
11	GO:0009543: chloroplast thylakoid lumen	5.95E-04
12	GO:0030529: intracellular ribonucleoprotein complex	7.72E-04
13	GO:0009344: nitrite reductase complex [NAD(P)H]	8.35E-04
14	GO:0009501: amyloplast	1.36E-03
15	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.81E-03
16	GO:0031357: integral component of chloroplast inner membrane	1.81E-03
17	GO:0046658: anchored component of plasma membrane	1.99E-03
18	GO:0019897: extrinsic component of plasma membrane	3.00E-03
19	GO:0010007: magnesium chelatase complex	3.00E-03
20	GO:0030139: endocytic vesicle	3.00E-03
21	GO:0009317: acetyl-CoA carboxylase complex	3.00E-03
22	GO:0009528: plastid inner membrane	3.00E-03
23	GO:0010319: stromule	3.79E-03
24	GO:0032585: multivesicular body membrane	4.37E-03
25	GO:0015630: microtubule cytoskeleton	4.37E-03
26	GO:0042646: plastid nucleoid	4.37E-03
27	GO:0005719: nuclear euchromatin	4.37E-03
28	GO:0009579: thylakoid	5.73E-03
29	GO:0030663: COPI-coated vesicle membrane	5.92E-03
30	GO:0009527: plastid outer membrane	5.92E-03
31	GO:0009707: chloroplast outer membrane	6.19E-03
32	GO:0009706: chloroplast inner membrane	6.74E-03
33	GO:0042651: thylakoid membrane	7.33E-03
34	GO:0009532: plastid stroma	8.07E-03
35	GO:0005886: plasma membrane	1.13E-02
36	GO:0005655: nucleolar ribonuclease P complex	1.15E-02
37	GO:0009986: cell surface	1.36E-02
38	GO:0009533: chloroplast stromal thylakoid	1.36E-02
39	GO:0048226: Casparian strip	1.59E-02
40	GO:0012507: ER to Golgi transport vesicle membrane	1.59E-02
41	GO:0042644: chloroplast nucleoid	2.08E-02
42	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.08E-02
43	GO:0015030: Cajal body	2.34E-02
44	GO:0031225: anchored component of membrane	2.61E-02
45	GO:0000418: DNA-directed RNA polymerase IV complex	2.62E-02
46	GO:0016459: myosin complex	2.62E-02
47	GO:0030125: clathrin vesicle coat	2.62E-02
48	GO:0090404: pollen tube tip	2.90E-02
49	GO:0043231: intracellular membrane-bounded organelle	3.08E-02
50	GO:0030095: chloroplast photosystem II	3.82E-02
51	GO:0043234: protein complex	4.48E-02
52	GO:0031977: thylakoid lumen	4.72E-02