co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G43400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046460: neutral lipid biosynthetic process	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0051322: anaphase	3.22E-06
4	GO:0048657: anther wall tapetum cell differentiation	5.48E-05
5	GO:0042547: cell wall modification involved in multidimensional cell growth	5.48E-05
6	GO:0015798: myo-inositol transport	5.48E-05
7	GO:0043087: regulation of GTPase activity	5.48E-05
8	GO:0051171: regulation of nitrogen compound metabolic process	5.48E-05
9	GO:0009825: multidimensional cell growth	1.11E-04
10	GO:0043255: regulation of carbohydrate biosynthetic process	1.34E-04
11	GO:0080005: photosystem stoichiometry adjustment	1.34E-04
12	GO:0006435: threonyl-tRNA aminoacylation	1.34E-04
13	GO:0001578: microtubule bundle formation	2.28E-04
14	GO:0010255: glucose mediated signaling pathway	3.33E-04
15	GO:0006168: adenine salvage	3.33E-04
16	GO:0006166: purine ribonucleoside salvage	3.33E-04
17	GO:0006552: leucine catabolic process	4.45E-04
18	GO:0007020: microtubule nucleation	4.45E-04
19	GO:0000910: cytokinesis	4.90E-04
20	GO:0046785: microtubule polymerization	5.66E-04
21	GO:0044209: AMP salvage	5.66E-04
22	GO:0010337: regulation of salicylic acid metabolic process	6.92E-04
23	GO:0042549: photosystem II stabilization	6.92E-04
24	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	6.92E-04
25	GO:0034389: lipid particle organization	8.25E-04
26	GO:0046777: protein autophosphorylation	9.52E-04
27	GO:0048528: post-embryonic root development	9.62E-04
28	GO:0009704: de-etiolation	1.11E-03
29	GO:0007155: cell adhesion	1.11E-03
30	GO:0048564: photosystem I assembly	1.11E-03
31	GO:0022900: electron transport chain	1.26E-03
32	GO:0009821: alkaloid biosynthetic process	1.41E-03
33	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.41E-03
34	GO:0019432: triglyceride biosynthetic process	1.41E-03
35	GO:0010380: regulation of chlorophyll biosynthetic process	1.58E-03
36	GO:0006032: chitin catabolic process	1.75E-03
37	GO:0010215: cellulose microfibril organization	1.75E-03
38	GO:0000272: polysaccharide catabolic process	1.93E-03
39	GO:0009767: photosynthetic electron transport chain	2.30E-03
40	GO:0010207: photosystem II assembly	2.49E-03
41	GO:0090351: seedling development	2.70E-03
42	GO:0010053: root epidermal cell differentiation	2.70E-03
43	GO:0010167: response to nitrate	2.70E-03
44	GO:0006071: glycerol metabolic process	2.90E-03
45	GO:0010187: negative regulation of seed germination	3.11E-03
46	GO:0010073: meristem maintenance	3.32E-03
47	GO:0006825: copper ion transport	3.32E-03
48	GO:0043622: cortical microtubule organization	3.32E-03
49	GO:0016998: cell wall macromolecule catabolic process	3.54E-03
50	GO:0048511: rhythmic process	3.54E-03
51	GO:0009814: defense response, incompatible interaction	3.77E-03
52	GO:0016226: iron-sulfur cluster assembly	3.77E-03
53	GO:0080092: regulation of pollen tube growth	3.77E-03
54	GO:0006730: one-carbon metabolic process	3.77E-03
55	GO:0010468: regulation of gene expression	4.08E-03
56	GO:0010584: pollen exine formation	4.23E-03
57	GO:0010268: brassinosteroid homeostasis	4.96E-03
58	GO:0009658: chloroplast organization	5.28E-03
59	GO:0016132: brassinosteroid biosynthetic process	5.74E-03
60	GO:0071554: cell wall organization or biogenesis	5.74E-03
61	GO:0010583: response to cyclopentenone	6.00E-03
62	GO:0071281: cellular response to iron ion	6.27E-03
63	GO:0016125: sterol metabolic process	6.55E-03
64	GO:0009911: positive regulation of flower development	7.40E-03
65	GO:0006508: proteolysis	7.55E-03
66	GO:0030244: cellulose biosynthetic process	8.91E-03
67	GO:0006811: ion transport	9.54E-03
68	GO:0009910: negative regulation of flower development	9.86E-03
69	GO:0009853: photorespiration	1.05E-02
70	GO:0009873: ethylene-activated signaling pathway	1.25E-02
71	GO:0008283: cell proliferation	1.26E-02
72	GO:0009664: plant-type cell wall organization	1.48E-02
73	GO:0009809: lignin biosynthetic process	1.55E-02
74	GO:0010224: response to UV-B	1.59E-02
75	GO:0006417: regulation of translation	1.67E-02
76	GO:0006096: glycolytic process	1.75E-02
77	GO:0009740: gibberellic acid mediated signaling pathway	1.91E-02
78	GO:0009058: biosynthetic process	2.43E-02
79	GO:0042744: hydrogen peroxide catabolic process	2.57E-02
80	GO:0040008: regulation of growth	2.85E-02
81	GO:0007623: circadian rhythm	2.94E-02
82	GO:0045490: pectin catabolic process	2.94E-02
83	GO:0009739: response to gibberellin	3.19E-02
84	GO:0006470: protein dephosphorylation	3.24E-02
85	GO:0009651: response to salt stress	3.28E-02
86	GO:0009826: unidimensional cell growth	3.91E-02
87	GO:0042254: ribosome biogenesis	4.07E-02
88	GO:0009860: pollen tube growth	4.23E-02
89	GO:0009723: response to ethylene	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
2	GO:0004485: methylcrotonoyl-CoA carboxylase activity	5.48E-05
3	GO:0004008: copper-exporting ATPase activity	5.48E-05
4	GO:0004829: threonine-tRNA ligase activity	1.34E-04
5	GO:0005366: myo-inositol:proton symporter activity	1.34E-04
6	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.34E-04
7	GO:0004075: biotin carboxylase activity	2.28E-04
8	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	2.28E-04
9	GO:0016805: dipeptidase activity	2.28E-04
10	GO:0032947: protein complex scaffold	2.28E-04
11	GO:0003999: adenine phosphoribosyltransferase activity	3.33E-04
12	GO:0004144: diacylglycerol O-acyltransferase activity	8.25E-04
13	GO:0016161: beta-amylase activity	8.25E-04
14	GO:0009927: histidine phosphotransfer kinase activity	8.25E-04
15	GO:0051537: 2 iron, 2 sulfur cluster binding	1.15E-03
16	GO:0005375: copper ion transmembrane transporter activity	1.26E-03
17	GO:0016844: strictosidine synthase activity	1.58E-03
18	GO:0004568: chitinase activity	1.75E-03
19	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.93E-03
20	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.30E-03
21	GO:0004190: aspartic-type endopeptidase activity	2.70E-03
22	GO:0046872: metal ion binding	3.03E-03
23	GO:0051536: iron-sulfur cluster binding	3.11E-03
24	GO:0008017: microtubule binding	3.58E-03
25	GO:0030570: pectate lyase activity	4.00E-03
26	GO:0008080: N-acetyltransferase activity	4.96E-03
27	GO:0001085: RNA polymerase II transcription factor binding	4.96E-03
28	GO:0004518: nuclease activity	6.00E-03
29	GO:0008237: metallopeptidase activity	6.83E-03
30	GO:0005506: iron ion binding	6.98E-03
31	GO:0016413: O-acetyltransferase activity	7.11E-03
32	GO:0052689: carboxylic ester hydrolase activity	7.22E-03
33	GO:0004721: phosphoprotein phosphatase activity	8.29E-03
34	GO:0030247: polysaccharide binding	8.29E-03
35	GO:0004722: protein serine/threonine phosphatase activity	8.58E-03
36	GO:0005096: GTPase activator activity	9.22E-03
37	GO:0050897: cobalt ion binding	9.86E-03
38	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	9.86E-03
39	GO:0003993: acid phosphatase activity	1.09E-02
40	GO:0035091: phosphatidylinositol binding	1.33E-02
41	GO:0005198: structural molecule activity	1.37E-02
42	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.38E-02
43	GO:0016829: lyase activity	2.47E-02
44	GO:0004252: serine-type endopeptidase activity	2.52E-02
45	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.57E-02
46	GO:0015144: carbohydrate transmembrane transporter activity	2.66E-02
47	GO:0005351: sugar:proton symporter activity	2.89E-02
48	GO:0004601: peroxidase activity	4.01E-02
49	GO:0003682: chromatin binding	4.18E-02
50	GO:0008233: peptidase activity	4.62E-02
51	GO:0004497: monooxygenase activity	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0009930: longitudinal side of cell surface	0.00E+00
2	GO:0009574: preprophase band	1.07E-06
3	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	5.48E-05
4	GO:0009897: external side of plasma membrane	2.28E-04
5	GO:0016328: lateral plasma membrane	2.28E-04
6	GO:0030660: Golgi-associated vesicle membrane	4.45E-04
7	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	4.45E-04
8	GO:0072686: mitotic spindle	5.66E-04
9	GO:0010005: cortical microtubule, transverse to long axis	8.25E-04
10	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.11E-03
11	GO:0005811: lipid particle	1.26E-03
12	GO:0055028: cortical microtubule	1.75E-03
13	GO:0016324: apical plasma membrane	1.75E-03
14	GO:0005765: lysosomal membrane	1.93E-03
15	GO:0005938: cell cortex	2.30E-03
16	GO:0009524: phragmoplast	2.63E-03
17	GO:0005759: mitochondrial matrix	3.12E-03
18	GO:0046658: anchored component of plasma membrane	4.52E-03
19	GO:0005773: vacuole	4.78E-03
20	GO:0031225: anchored component of membrane	5.11E-03
21	GO:0005874: microtubule	6.32E-03
22	GO:0009507: chloroplast	7.63E-03
23	GO:0005667: transcription factor complex	7.99E-03
24	GO:0009707: chloroplast outer membrane	8.91E-03
25	GO:0009505: plant-type cell wall	9.48E-03
26	GO:0005819: spindle	1.12E-02
27	GO:0010008: endosome membrane	1.79E-02
28	GO:0009535: chloroplast thylakoid membrane	1.98E-02
29	GO:0016021: integral component of membrane	2.63E-02
30	GO:0009705: plant-type vacuole membrane	2.94E-02
31	GO:0005794: Golgi apparatus	3.83E-02
32	GO:0009536: plastid	4.26E-02
33	GO:0005576: extracellular region	4.43E-02
34	GO:0031969: chloroplast membrane	4.68E-02