GO Enrichment Analysis of Co-expressed Genes with
AT2G43080
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006903: vesicle targeting | 0.00E+00 |
| 2 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 3 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 4 | GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process | 0.00E+00 |
| 5 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.34E-08 |
| 6 | GO:0006099: tricarboxylic acid cycle | 1.46E-05 |
| 7 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.31E-05 |
| 8 | GO:0006102: isocitrate metabolic process | 7.88E-05 |
| 9 | GO:0019628: urate catabolic process | 1.23E-04 |
| 10 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 1.23E-04 |
| 11 | GO:0006144: purine nucleobase metabolic process | 1.23E-04 |
| 12 | GO:0046686: response to cadmium ion | 2.45E-04 |
| 13 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 2.86E-04 |
| 14 | GO:0046939: nucleotide phosphorylation | 2.86E-04 |
| 15 | GO:0006568: tryptophan metabolic process | 2.86E-04 |
| 16 | GO:0010372: positive regulation of gibberellin biosynthetic process | 2.86E-04 |
| 17 | GO:0015865: purine nucleotide transport | 2.86E-04 |
| 18 | GO:0051252: regulation of RNA metabolic process | 2.86E-04 |
| 19 | GO:0043132: NAD transport | 2.86E-04 |
| 20 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 2.86E-04 |
| 21 | GO:0007031: peroxisome organization | 3.45E-04 |
| 22 | GO:0000162: tryptophan biosynthetic process | 3.85E-04 |
| 23 | GO:0010359: regulation of anion channel activity | 4.72E-04 |
| 24 | GO:0044375: regulation of peroxisome size | 4.72E-04 |
| 25 | GO:0090630: activation of GTPase activity | 4.72E-04 |
| 26 | GO:0015992: proton transport | 5.17E-04 |
| 27 | GO:0046902: regulation of mitochondrial membrane permeability | 6.76E-04 |
| 28 | GO:0015858: nucleoside transport | 6.76E-04 |
| 29 | GO:0006612: protein targeting to membrane | 6.76E-04 |
| 30 | GO:0006893: Golgi to plasma membrane transport | 6.76E-04 |
| 31 | GO:0001676: long-chain fatty acid metabolic process | 6.76E-04 |
| 32 | GO:0045454: cell redox homeostasis | 7.65E-04 |
| 33 | GO:0010363: regulation of plant-type hypersensitive response | 8.97E-04 |
| 34 | GO:0006221: pyrimidine nucleotide biosynthetic process | 8.97E-04 |
| 35 | GO:0032968: positive regulation of transcription elongation from RNA polymerase II promoter | 8.97E-04 |
| 36 | GO:0009058: biosynthetic process | 1.07E-03 |
| 37 | GO:0006564: L-serine biosynthetic process | 1.13E-03 |
| 38 | GO:0005513: detection of calcium ion | 1.13E-03 |
| 39 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.13E-03 |
| 40 | GO:0030163: protein catabolic process | 1.15E-03 |
| 41 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.39E-03 |
| 42 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.39E-03 |
| 43 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 1.39E-03 |
| 44 | GO:0001731: formation of translation preinitiation complex | 1.39E-03 |
| 45 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.66E-03 |
| 46 | GO:0009612: response to mechanical stimulus | 1.66E-03 |
| 47 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.95E-03 |
| 48 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.95E-03 |
| 49 | GO:0022904: respiratory electron transport chain | 1.95E-03 |
| 50 | GO:0006499: N-terminal protein myristoylation | 2.07E-03 |
| 51 | GO:0006402: mRNA catabolic process | 2.26E-03 |
| 52 | GO:0060321: acceptance of pollen | 2.58E-03 |
| 53 | GO:0006367: transcription initiation from RNA polymerase II promoter | 2.58E-03 |
| 54 | GO:0010120: camalexin biosynthetic process | 2.58E-03 |
| 55 | GO:0015031: protein transport | 2.70E-03 |
| 56 | GO:0046685: response to arsenic-containing substance | 2.91E-03 |
| 57 | GO:0009821: alkaloid biosynthetic process | 2.91E-03 |
| 58 | GO:0009060: aerobic respiration | 2.91E-03 |
| 59 | GO:0090332: stomatal closure | 3.26E-03 |
| 60 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 3.26E-03 |
| 61 | GO:0043069: negative regulation of programmed cell death | 3.62E-03 |
| 62 | GO:0009846: pollen germination | 3.83E-03 |
| 63 | GO:0009682: induced systemic resistance | 4.00E-03 |
| 64 | GO:0072593: reactive oxygen species metabolic process | 4.00E-03 |
| 65 | GO:0043085: positive regulation of catalytic activity | 4.00E-03 |
| 66 | GO:0006790: sulfur compound metabolic process | 4.39E-03 |
| 67 | GO:0006820: anion transport | 4.39E-03 |
| 68 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 4.39E-03 |
| 69 | GO:0006807: nitrogen compound metabolic process | 4.79E-03 |
| 70 | GO:0006096: glycolytic process | 4.85E-03 |
| 71 | GO:0034605: cellular response to heat | 5.20E-03 |
| 72 | GO:0006446: regulation of translational initiation | 5.20E-03 |
| 73 | GO:0046854: phosphatidylinositol phosphorylation | 5.63E-03 |
| 74 | GO:0034976: response to endoplasmic reticulum stress | 6.06E-03 |
| 75 | GO:0055114: oxidation-reduction process | 6.40E-03 |
| 76 | GO:0010187: negative regulation of seed germination | 6.51E-03 |
| 77 | GO:0042742: defense response to bacterium | 7.25E-03 |
| 78 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.93E-03 |
| 79 | GO:0042744: hydrogen peroxide catabolic process | 8.31E-03 |
| 80 | GO:0010227: floral organ abscission | 8.43E-03 |
| 81 | GO:0009411: response to UV | 8.43E-03 |
| 82 | GO:0040007: growth | 8.43E-03 |
| 83 | GO:0010089: xylem development | 8.93E-03 |
| 84 | GO:0009561: megagametogenesis | 8.93E-03 |
| 85 | GO:0009306: protein secretion | 8.93E-03 |
| 86 | GO:0006413: translational initiation | 9.39E-03 |
| 87 | GO:0042147: retrograde transport, endosome to Golgi | 9.45E-03 |
| 88 | GO:0010118: stomatal movement | 9.99E-03 |
| 89 | GO:0006662: glycerol ether metabolic process | 1.05E-02 |
| 90 | GO:0048868: pollen tube development | 1.05E-02 |
| 91 | GO:0009611: response to wounding | 1.19E-02 |
| 92 | GO:0009617: response to bacterium | 1.20E-02 |
| 93 | GO:0010193: response to ozone | 1.22E-02 |
| 94 | GO:0031047: gene silencing by RNA | 1.28E-02 |
| 95 | GO:0009567: double fertilization forming a zygote and endosperm | 1.40E-02 |
| 96 | GO:0009651: response to salt stress | 1.46E-02 |
| 97 | GO:0006904: vesicle docking involved in exocytosis | 1.46E-02 |
| 98 | GO:0016579: protein deubiquitination | 1.52E-02 |
| 99 | GO:0055085: transmembrane transport | 1.57E-02 |
| 100 | GO:0009615: response to virus | 1.58E-02 |
| 101 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.78E-02 |
| 102 | GO:0006950: response to stress | 1.78E-02 |
| 103 | GO:0006811: ion transport | 2.05E-02 |
| 104 | GO:0010119: regulation of stomatal movement | 2.12E-02 |
| 105 | GO:0010043: response to zinc ion | 2.12E-02 |
| 106 | GO:0009867: jasmonic acid mediated signaling pathway | 2.26E-02 |
| 107 | GO:0045087: innate immune response | 2.26E-02 |
| 108 | GO:0034599: cellular response to oxidative stress | 2.34E-02 |
| 109 | GO:0006839: mitochondrial transport | 2.48E-02 |
| 110 | GO:0006887: exocytosis | 2.56E-02 |
| 111 | GO:0006631: fatty acid metabolic process | 2.56E-02 |
| 112 | GO:0008283: cell proliferation | 2.71E-02 |
| 113 | GO:0006397: mRNA processing | 2.99E-02 |
| 114 | GO:0006855: drug transmembrane transport | 3.03E-02 |
| 115 | GO:0031347: regulation of defense response | 3.11E-02 |
| 116 | GO:0009809: lignin biosynthetic process | 3.35E-02 |
| 117 | GO:0050832: defense response to fungus | 3.68E-02 |
| 118 | GO:0009620: response to fungus | 4.04E-02 |
| 119 | GO:0009553: embryo sac development | 4.22E-02 |
| 120 | GO:0009624: response to nematode | 4.31E-02 |
| 121 | GO:0006396: RNA processing | 4.40E-02 |
| 122 | GO:0018105: peptidyl-serine phosphorylation | 4.40E-02 |
| 123 | GO:0009735: response to cytokinin | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 2 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 3 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 4 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 5 | GO:0044610: FMN transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0004298: threonine-type endopeptidase activity | 3.05E-13 |
| 7 | GO:0008233: peptidase activity | 3.57E-07 |
| 8 | GO:0004640: phosphoribosylanthranilate isomerase activity | 7.73E-07 |
| 9 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 6.84E-06 |
| 10 | GO:0048037: cofactor binding | 1.23E-04 |
| 11 | GO:0015230: FAD transmembrane transporter activity | 1.23E-04 |
| 12 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.86E-04 |
| 13 | GO:0051724: NAD transporter activity | 2.86E-04 |
| 14 | GO:0004127: cytidylate kinase activity | 2.86E-04 |
| 15 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.86E-04 |
| 16 | GO:0008428: ribonuclease inhibitor activity | 2.86E-04 |
| 17 | GO:0008517: folic acid transporter activity | 2.86E-04 |
| 18 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 2.86E-04 |
| 19 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.86E-04 |
| 20 | GO:0015228: coenzyme A transmembrane transporter activity | 2.86E-04 |
| 21 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 4.72E-04 |
| 22 | GO:0019201: nucleotide kinase activity | 6.76E-04 |
| 23 | GO:0009041: uridylate kinase activity | 6.76E-04 |
| 24 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 8.97E-04 |
| 25 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 8.97E-04 |
| 26 | GO:0008022: protein C-terminus binding | 8.97E-04 |
| 27 | GO:0004518: nuclease activity | 1.09E-03 |
| 28 | GO:0008948: oxaloacetate decarboxylase activity | 1.13E-03 |
| 29 | GO:0080122: AMP transmembrane transporter activity | 1.13E-03 |
| 30 | GO:0000104: succinate dehydrogenase activity | 1.13E-03 |
| 31 | GO:0008177: succinate dehydrogenase (ubiquinone) activity | 1.13E-03 |
| 32 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.13E-03 |
| 33 | GO:0005471: ATP:ADP antiporter activity | 1.13E-03 |
| 34 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.39E-03 |
| 35 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.39E-03 |
| 36 | GO:0036402: proteasome-activating ATPase activity | 1.39E-03 |
| 37 | GO:0005524: ATP binding | 1.54E-03 |
| 38 | GO:0015217: ADP transmembrane transporter activity | 1.66E-03 |
| 39 | GO:0051920: peroxiredoxin activity | 1.66E-03 |
| 40 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.66E-03 |
| 41 | GO:0102391: decanoate--CoA ligase activity | 1.66E-03 |
| 42 | GO:0004017: adenylate kinase activity | 1.66E-03 |
| 43 | GO:0005347: ATP transmembrane transporter activity | 1.66E-03 |
| 44 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.95E-03 |
| 45 | GO:0015288: porin activity | 2.26E-03 |
| 46 | GO:0016209: antioxidant activity | 2.26E-03 |
| 47 | GO:0008308: voltage-gated anion channel activity | 2.58E-03 |
| 48 | GO:0004601: peroxidase activity | 2.60E-03 |
| 49 | GO:0004743: pyruvate kinase activity | 3.26E-03 |
| 50 | GO:0030955: potassium ion binding | 3.26E-03 |
| 51 | GO:0016844: strictosidine synthase activity | 3.26E-03 |
| 52 | GO:0005198: structural molecule activity | 3.43E-03 |
| 53 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 3.62E-03 |
| 54 | GO:0008047: enzyme activator activity | 3.62E-03 |
| 55 | GO:0051287: NAD binding | 3.69E-03 |
| 56 | GO:0008794: arsenate reductase (glutaredoxin) activity | 4.00E-03 |
| 57 | GO:0008559: xenobiotic-transporting ATPase activity | 4.00E-03 |
| 58 | GO:0005507: copper ion binding | 4.25E-03 |
| 59 | GO:0017025: TBP-class protein binding | 5.63E-03 |
| 60 | GO:0004190: aspartic-type endopeptidase activity | 5.63E-03 |
| 61 | GO:0015035: protein disulfide oxidoreductase activity | 6.00E-03 |
| 62 | GO:0009055: electron carrier activity | 6.12E-03 |
| 63 | GO:0016787: hydrolase activity | 6.71E-03 |
| 64 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 7.45E-03 |
| 65 | GO:0008565: protein transporter activity | 8.73E-03 |
| 66 | GO:0003756: protein disulfide isomerase activity | 8.93E-03 |
| 67 | GO:0047134: protein-disulfide reductase activity | 9.45E-03 |
| 68 | GO:0004791: thioredoxin-disulfide reductase activity | 1.11E-02 |
| 69 | GO:0016853: isomerase activity | 1.11E-02 |
| 70 | GO:0003743: translation initiation factor activity | 1.18E-02 |
| 71 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.22E-02 |
| 72 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.34E-02 |
| 73 | GO:0020037: heme binding | 1.44E-02 |
| 74 | GO:0016597: amino acid binding | 1.52E-02 |
| 75 | GO:0000287: magnesium ion binding | 1.54E-02 |
| 76 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.71E-02 |
| 77 | GO:0004683: calmodulin-dependent protein kinase activity | 1.78E-02 |
| 78 | GO:0005096: GTPase activator activity | 1.98E-02 |
| 79 | GO:0050897: cobalt ion binding | 2.12E-02 |
| 80 | GO:0003746: translation elongation factor activity | 2.26E-02 |
| 81 | GO:0046872: metal ion binding | 2.30E-02 |
| 82 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.48E-02 |
| 83 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.87E-02 |
| 84 | GO:0003924: GTPase activity | 2.87E-02 |
| 85 | GO:0008026: ATP-dependent helicase activity | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005839: proteasome core complex | 3.05E-13 |
| 2 | GO:0000502: proteasome complex | 5.19E-13 |
| 3 | GO:0005774: vacuolar membrane | 4.45E-08 |
| 4 | GO:0005829: cytosol | 4.68E-08 |
| 5 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.29E-06 |
| 6 | GO:0046861: glyoxysomal membrane | 2.91E-06 |
| 7 | GO:0009514: glyoxysome | 9.94E-05 |
| 8 | GO:0016442: RISC complex | 1.23E-04 |
| 9 | GO:0005618: cell wall | 1.62E-04 |
| 10 | GO:0045281: succinate dehydrogenase complex | 2.86E-04 |
| 11 | GO:0005773: vacuole | 3.78E-04 |
| 12 | GO:0030660: Golgi-associated vesicle membrane | 8.97E-04 |
| 13 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 8.97E-04 |
| 14 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 8.97E-04 |
| 15 | GO:0005778: peroxisomal membrane | 1.30E-03 |
| 16 | GO:0030904: retromer complex | 1.39E-03 |
| 17 | GO:0016282: eukaryotic 43S preinitiation complex | 1.39E-03 |
| 18 | GO:0033290: eukaryotic 48S preinitiation complex | 1.66E-03 |
| 19 | GO:0031597: cytosolic proteasome complex | 1.66E-03 |
| 20 | GO:0031595: nuclear proteasome complex | 1.95E-03 |
| 21 | GO:0045273: respiratory chain complex II | 2.26E-03 |
| 22 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.26E-03 |
| 23 | GO:0046930: pore complex | 2.58E-03 |
| 24 | GO:0005779: integral component of peroxisomal membrane | 2.58E-03 |
| 25 | GO:0010494: cytoplasmic stress granule | 2.91E-03 |
| 26 | GO:0005777: peroxisome | 3.06E-03 |
| 27 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.26E-03 |
| 28 | GO:0005740: mitochondrial envelope | 3.62E-03 |
| 29 | GO:0005765: lysosomal membrane | 4.00E-03 |
| 30 | GO:0048471: perinuclear region of cytoplasm | 4.00E-03 |
| 31 | GO:0005737: cytoplasm | 4.22E-03 |
| 32 | GO:0005743: mitochondrial inner membrane | 5.10E-03 |
| 33 | GO:0005750: mitochondrial respiratory chain complex III | 5.20E-03 |
| 34 | GO:0005758: mitochondrial intermembrane space | 6.51E-03 |
| 35 | GO:0070469: respiratory chain | 6.98E-03 |
| 36 | GO:0005741: mitochondrial outer membrane | 7.45E-03 |
| 37 | GO:0000145: exocyst | 1.28E-02 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 1.58E-02 |
| 39 | GO:0000932: P-body | 1.58E-02 |
| 40 | GO:0048046: apoplast | 1.68E-02 |
| 41 | GO:0005783: endoplasmic reticulum | 1.89E-02 |
| 42 | GO:0019005: SCF ubiquitin ligase complex | 1.91E-02 |
| 43 | GO:0005794: Golgi apparatus | 2.09E-02 |
| 44 | GO:0000325: plant-type vacuole | 2.12E-02 |
| 45 | GO:0005886: plasma membrane | 2.44E-02 |
| 46 | GO:0031902: late endosome membrane | 2.56E-02 |
| 47 | GO:0005856: cytoskeleton | 2.95E-02 |
| 48 | GO:0005635: nuclear envelope | 3.52E-02 |
| 49 | GO:0005739: mitochondrion | 3.98E-02 |
| 50 | GO:0022626: cytosolic ribosome | 4.84E-02 |