Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G42530

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015979: photosynthesis5.11E-18
2GO:0009768: photosynthesis, light harvesting in photosystem I5.98E-14
3GO:0018298: protein-chromophore linkage4.07E-12
4GO:0010218: response to far red light3.48E-07
5GO:0009637: response to blue light4.48E-07
6GO:0009645: response to low light intensity stimulus4.74E-07
7GO:0010196: nonphotochemical quenching4.74E-07
8GO:0010114: response to red light7.09E-07
9GO:0019684: photosynthesis, light reaction2.09E-06
10GO:0009765: photosynthesis, light harvesting6.61E-05
11GO:0009644: response to high light intensity7.18E-05
12GO:0018119: peptidyl-cysteine S-nitrosylation3.33E-04
13GO:0009773: photosynthetic electron transport in photosystem I3.33E-04
14GO:0015706: nitrate transport3.65E-04
15GO:0010207: photosystem II assembly4.30E-04
16GO:0042631: cellular response to water deprivation7.91E-04
17GO:0006814: sodium ion transport8.70E-04
18GO:0009735: response to cytokinin1.06E-03
19GO:0042128: nitrate assimilation1.29E-03
20GO:0055085: transmembrane transport1.45E-03
21GO:0009631: cold acclimation1.57E-03
22GO:0009740: gibberellic acid mediated signaling pathway2.94E-03
23GO:0009624: response to nematode3.06E-03
24GO:0009409: response to cold3.08E-03
25GO:0009739: response to gibberellin4.79E-03
26GO:0009416: response to light stimulus1.37E-02
27GO:0042742: defense response to bacterium2.25E-02
28GO:0006979: response to oxidative stress2.27E-02
29GO:0009737: response to abscisic acid3.87E-02
RankGO TermAdjusted P value
1GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
2GO:0031409: pigment binding3.22E-14
3GO:0016168: chlorophyll binding2.22E-12
4GO:0015112: nitrate transmembrane transporter activity2.72E-04
5GO:0005315: inorganic phosphate transmembrane transporter activity3.97E-04
6GO:0008266: poly(U) RNA binding4.30E-04
7GO:0008514: organic anion transmembrane transporter activity7.14E-04
8GO:0005509: calcium ion binding2.11E-03
9GO:0015293: symporter activity2.14E-03
10GO:0015144: carbohydrate transmembrane transporter activity4.02E-03
11GO:0005351: sugar:proton symporter activity4.36E-03
12GO:0046872: metal ion binding4.49E-03
13GO:0005516: calmodulin binding1.82E-02
14GO:0005515: protein binding2.44E-02
RankGO TermAdjusted P value
1GO:0009783: photosystem II antenna complex0.00E+00
2GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
3GO:0009579: thylakoid4.80E-23
4GO:0009534: chloroplast thylakoid5.11E-23
5GO:0009535: chloroplast thylakoid membrane7.83E-22
6GO:0010287: plastoglobule8.65E-18
7GO:0009522: photosystem I6.84E-16
8GO:0009507: chloroplast4.85E-11
9GO:0009538: photosystem I reaction center7.79E-10
10GO:0030076: light-harvesting complex1.11E-08
11GO:0009941: chloroplast envelope1.77E-08
12GO:0009543: chloroplast thylakoid lumen3.36E-06
13GO:0030095: chloroplast photosystem II3.51E-06
14GO:0016021: integral component of membrane3.56E-06
15GO:0016020: membrane5.21E-06
16GO:0009782: photosystem I antenna complex6.06E-06
17GO:0009654: photosystem II oxygen evolving complex6.15E-06
18GO:0009523: photosystem II1.57E-05
19GO:0019898: extrinsic component of membrane1.57E-05
20GO:0030093: chloroplast photosystem I1.65E-05
21GO:0031977: thylakoid lumen5.98E-05
22GO:0009517: PSII associated light-harvesting complex II6.61E-05
23GO:0009533: chloroplast stromal thylakoid1.60E-04
24GO:0042651: thylakoid membrane5.68E-04
25GO:0009705: plant-type vacuole membrane4.43E-03
26GO:0031969: chloroplast membrane6.94E-03
27GO:0048046: apoplast8.22E-03
28GO:0009570: chloroplast stroma1.49E-02
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Gene type



Gene DE type