GO Enrichment Analysis of Co-expressed Genes with
AT2G42130
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 2 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 3 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 6 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 7 | GO:0017038: protein import | 0.00E+00 |
| 8 | GO:0006605: protein targeting | 9.31E-05 |
| 9 | GO:0032544: plastid translation | 1.17E-04 |
| 10 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.37E-04 |
| 11 | GO:0010027: thylakoid membrane organization | 1.44E-04 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 1.81E-04 |
| 13 | GO:0043085: positive regulation of catalytic activity | 2.39E-04 |
| 14 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.16E-04 |
| 15 | GO:0048281: inflorescence morphogenesis | 5.20E-04 |
| 16 | GO:0010581: regulation of starch biosynthetic process | 5.20E-04 |
| 17 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.20E-04 |
| 18 | GO:0007231: osmosensory signaling pathway | 7.44E-04 |
| 19 | GO:0051085: chaperone mediated protein folding requiring cofactor | 7.44E-04 |
| 20 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 7.44E-04 |
| 21 | GO:0010148: transpiration | 7.44E-04 |
| 22 | GO:0046739: transport of virus in multicellular host | 7.44E-04 |
| 23 | GO:0006986: response to unfolded protein | 7.44E-04 |
| 24 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 7.44E-04 |
| 25 | GO:0010109: regulation of photosynthesis | 9.85E-04 |
| 26 | GO:0019464: glycine decarboxylation via glycine cleavage system | 9.85E-04 |
| 27 | GO:0006109: regulation of carbohydrate metabolic process | 9.85E-04 |
| 28 | GO:0033500: carbohydrate homeostasis | 9.85E-04 |
| 29 | GO:0006546: glycine catabolic process | 9.85E-04 |
| 30 | GO:0016120: carotene biosynthetic process | 1.25E-03 |
| 31 | GO:0000304: response to singlet oxygen | 1.25E-03 |
| 32 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.25E-03 |
| 33 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.53E-03 |
| 34 | GO:0010190: cytochrome b6f complex assembly | 1.53E-03 |
| 35 | GO:0006751: glutathione catabolic process | 1.53E-03 |
| 36 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.15E-03 |
| 37 | GO:0070370: cellular heat acclimation | 2.15E-03 |
| 38 | GO:0010444: guard mother cell differentiation | 2.15E-03 |
| 39 | GO:0010103: stomatal complex morphogenesis | 2.15E-03 |
| 40 | GO:0007155: cell adhesion | 2.49E-03 |
| 41 | GO:0009735: response to cytokinin | 2.72E-03 |
| 42 | GO:0071482: cellular response to light stimulus | 2.85E-03 |
| 43 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.85E-03 |
| 44 | GO:0009657: plastid organization | 2.85E-03 |
| 45 | GO:0001558: regulation of cell growth | 2.85E-03 |
| 46 | GO:0019430: removal of superoxide radicals | 2.85E-03 |
| 47 | GO:0006526: arginine biosynthetic process | 2.85E-03 |
| 48 | GO:0009658: chloroplast organization | 3.14E-03 |
| 49 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.60E-03 |
| 50 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.60E-03 |
| 51 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.00E-03 |
| 52 | GO:0009641: shade avoidance | 4.00E-03 |
| 53 | GO:0006816: calcium ion transport | 4.42E-03 |
| 54 | GO:0006415: translational termination | 4.42E-03 |
| 55 | GO:0009073: aromatic amino acid family biosynthetic process | 4.42E-03 |
| 56 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.42E-03 |
| 57 | GO:0005983: starch catabolic process | 4.85E-03 |
| 58 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.85E-03 |
| 59 | GO:0045454: cell redox homeostasis | 5.18E-03 |
| 60 | GO:0050826: response to freezing | 5.30E-03 |
| 61 | GO:0010020: chloroplast fission | 5.76E-03 |
| 62 | GO:0010207: photosystem II assembly | 5.76E-03 |
| 63 | GO:0070588: calcium ion transmembrane transport | 6.23E-03 |
| 64 | GO:0009944: polarity specification of adaxial/abaxial axis | 7.22E-03 |
| 65 | GO:0051302: regulation of cell division | 7.73E-03 |
| 66 | GO:0048511: rhythmic process | 8.26E-03 |
| 67 | GO:0010431: seed maturation | 8.26E-03 |
| 68 | GO:0031408: oxylipin biosynthetic process | 8.26E-03 |
| 69 | GO:0030245: cellulose catabolic process | 8.79E-03 |
| 70 | GO:0006730: one-carbon metabolic process | 8.79E-03 |
| 71 | GO:0001944: vasculature development | 9.35E-03 |
| 72 | GO:0019722: calcium-mediated signaling | 9.92E-03 |
| 73 | GO:0009561: megagametogenesis | 9.92E-03 |
| 74 | GO:0009306: protein secretion | 9.92E-03 |
| 75 | GO:0000413: protein peptidyl-prolyl isomerization | 1.11E-02 |
| 76 | GO:0006520: cellular amino acid metabolic process | 1.17E-02 |
| 77 | GO:0006662: glycerol ether metabolic process | 1.17E-02 |
| 78 | GO:0042752: regulation of circadian rhythm | 1.23E-02 |
| 79 | GO:0009646: response to absence of light | 1.23E-02 |
| 80 | GO:0048544: recognition of pollen | 1.23E-02 |
| 81 | GO:0032502: developmental process | 1.42E-02 |
| 82 | GO:0010090: trichome morphogenesis | 1.49E-02 |
| 83 | GO:0007267: cell-cell signaling | 1.62E-02 |
| 84 | GO:0009627: systemic acquired resistance | 1.90E-02 |
| 85 | GO:0009817: defense response to fungus, incompatible interaction | 2.12E-02 |
| 86 | GO:0009813: flavonoid biosynthetic process | 2.20E-02 |
| 87 | GO:0006499: N-terminal protein myristoylation | 2.28E-02 |
| 88 | GO:0009407: toxin catabolic process | 2.28E-02 |
| 89 | GO:0007568: aging | 2.36E-02 |
| 90 | GO:0009853: photorespiration | 2.51E-02 |
| 91 | GO:0045087: innate immune response | 2.51E-02 |
| 92 | GO:0015979: photosynthesis | 2.57E-02 |
| 93 | GO:0034599: cellular response to oxidative stress | 2.60E-02 |
| 94 | GO:0006839: mitochondrial transport | 2.76E-02 |
| 95 | GO:0030001: metal ion transport | 2.76E-02 |
| 96 | GO:0006631: fatty acid metabolic process | 2.84E-02 |
| 97 | GO:0009636: response to toxic substance | 3.27E-02 |
| 98 | GO:0009965: leaf morphogenesis | 3.27E-02 |
| 99 | GO:0042742: defense response to bacterium | 3.39E-02 |
| 100 | GO:0009664: plant-type cell wall organization | 3.54E-02 |
| 101 | GO:0006486: protein glycosylation | 3.72E-02 |
| 102 | GO:0006412: translation | 3.93E-02 |
| 103 | GO:0006096: glycolytic process | 4.19E-02 |
| 104 | GO:0043086: negative regulation of catalytic activity | 4.19E-02 |
| 105 | GO:0006396: RNA processing | 4.88E-02 |
| 106 | GO:0009742: brassinosteroid mediated signaling pathway | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 3 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 4 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 1.37E-04 |
| 5 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.37E-04 |
| 6 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 1.37E-04 |
| 7 | GO:0050308: sugar-phosphatase activity | 1.37E-04 |
| 8 | GO:0019203: carbohydrate phosphatase activity | 1.37E-04 |
| 9 | GO:0005080: protein kinase C binding | 1.37E-04 |
| 10 | GO:0019843: rRNA binding | 1.53E-04 |
| 11 | GO:0008047: enzyme activator activity | 2.04E-04 |
| 12 | GO:0031072: heat shock protein binding | 3.14E-04 |
| 13 | GO:0003839: gamma-glutamylcyclotransferase activity | 3.16E-04 |
| 14 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.16E-04 |
| 15 | GO:0004047: aminomethyltransferase activity | 3.16E-04 |
| 16 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.16E-04 |
| 17 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.92E-04 |
| 18 | GO:0005528: FK506 binding | 4.93E-04 |
| 19 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 5.20E-04 |
| 20 | GO:0005504: fatty acid binding | 5.20E-04 |
| 21 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.20E-04 |
| 22 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 7.44E-04 |
| 23 | GO:0016851: magnesium chelatase activity | 7.44E-04 |
| 24 | GO:0016149: translation release factor activity, codon specific | 7.44E-04 |
| 25 | GO:0051082: unfolded protein binding | 9.14E-04 |
| 26 | GO:0019199: transmembrane receptor protein kinase activity | 9.85E-04 |
| 27 | GO:0045430: chalcone isomerase activity | 9.85E-04 |
| 28 | GO:0042277: peptide binding | 9.85E-04 |
| 29 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 9.85E-04 |
| 30 | GO:0004791: thioredoxin-disulfide reductase activity | 1.03E-03 |
| 31 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.33E-03 |
| 32 | GO:0008483: transaminase activity | 1.50E-03 |
| 33 | GO:2001070: starch binding | 1.53E-03 |
| 34 | GO:0051920: peroxiredoxin activity | 1.83E-03 |
| 35 | GO:0004017: adenylate kinase activity | 1.83E-03 |
| 36 | GO:0016209: antioxidant activity | 2.49E-03 |
| 37 | GO:0008312: 7S RNA binding | 2.49E-03 |
| 38 | GO:0004033: aldo-keto reductase (NADP) activity | 2.49E-03 |
| 39 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 3.22E-03 |
| 40 | GO:0003747: translation release factor activity | 3.22E-03 |
| 41 | GO:0004743: pyruvate kinase activity | 3.60E-03 |
| 42 | GO:0030955: potassium ion binding | 3.60E-03 |
| 43 | GO:0008378: galactosyltransferase activity | 4.85E-03 |
| 44 | GO:0005262: calcium channel activity | 5.30E-03 |
| 45 | GO:0008266: poly(U) RNA binding | 5.76E-03 |
| 46 | GO:0004857: enzyme inhibitor activity | 7.22E-03 |
| 47 | GO:0009055: electron carrier activity | 7.39E-03 |
| 48 | GO:0051087: chaperone binding | 7.73E-03 |
| 49 | GO:0043424: protein histidine kinase binding | 7.73E-03 |
| 50 | GO:0030570: pectate lyase activity | 9.35E-03 |
| 51 | GO:0008810: cellulase activity | 9.35E-03 |
| 52 | GO:0047134: protein-disulfide reductase activity | 1.05E-02 |
| 53 | GO:0001085: RNA polymerase II transcription factor binding | 1.17E-02 |
| 54 | GO:0046983: protein dimerization activity | 1.41E-02 |
| 55 | GO:0003729: mRNA binding | 1.65E-02 |
| 56 | GO:0016597: amino acid binding | 1.69E-02 |
| 57 | GO:0000287: magnesium ion binding | 1.78E-02 |
| 58 | GO:0004721: phosphoprotein phosphatase activity | 1.98E-02 |
| 59 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.12E-02 |
| 60 | GO:0005507: copper ion binding | 2.19E-02 |
| 61 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.36E-02 |
| 62 | GO:0003735: structural constituent of ribosome | 2.55E-02 |
| 63 | GO:0004364: glutathione transferase activity | 2.93E-02 |
| 64 | GO:0035091: phosphatidylinositol binding | 3.19E-02 |
| 65 | GO:0005198: structural molecule activity | 3.27E-02 |
| 66 | GO:0003924: GTPase activity | 3.32E-02 |
| 67 | GO:0051287: NAD binding | 3.45E-02 |
| 68 | GO:0003690: double-stranded DNA binding | 3.82E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 4.88E-02 |
| 70 | GO:0016746: transferase activity, transferring acyl groups | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.05E-29 |
| 2 | GO:0009570: chloroplast stroma | 2.80E-25 |
| 3 | GO:0009941: chloroplast envelope | 5.56E-15 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 4.84E-12 |
| 5 | GO:0009579: thylakoid | 5.13E-11 |
| 6 | GO:0009534: chloroplast thylakoid | 9.74E-10 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 5.43E-07 |
| 8 | GO:0031977: thylakoid lumen | 2.55E-05 |
| 9 | GO:0080085: signal recognition particle, chloroplast targeting | 3.16E-04 |
| 10 | GO:0010007: magnesium chelatase complex | 5.20E-04 |
| 11 | GO:0005960: glycine cleavage complex | 7.44E-04 |
| 12 | GO:0010319: stromule | 1.50E-03 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 2.15E-03 |
| 14 | GO:0005840: ribosome | 2.50E-03 |
| 15 | GO:0046658: anchored component of plasma membrane | 2.57E-03 |
| 16 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.85E-03 |
| 17 | GO:0031969: chloroplast membrane | 4.12E-03 |
| 18 | GO:0000311: plastid large ribosomal subunit | 4.85E-03 |
| 19 | GO:0009508: plastid chromosome | 5.30E-03 |
| 20 | GO:0000312: plastid small ribosomal subunit | 5.76E-03 |
| 21 | GO:0031225: anchored component of membrane | 6.12E-03 |
| 22 | GO:0043234: protein complex | 6.71E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 7.73E-03 |
| 24 | GO:0042651: thylakoid membrane | 7.73E-03 |
| 25 | GO:0009532: plastid stroma | 8.26E-03 |
| 26 | GO:0009505: plant-type cell wall | 1.28E-02 |
| 27 | GO:0019898: extrinsic component of membrane | 1.29E-02 |
| 28 | GO:0009295: nucleoid | 1.62E-02 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 1.76E-02 |
| 30 | GO:0005667: transcription factor complex | 1.90E-02 |
| 31 | GO:0048046: apoplast | 2.16E-02 |
| 32 | GO:0015934: large ribosomal subunit | 2.36E-02 |
| 33 | GO:0009536: plastid | 4.36E-02 |