Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G41835

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070212: protein poly-ADP-ribosylation0.00E+00
2GO:0032497: detection of lipopolysaccharide0.00E+00
3GO:0009626: plant-type hypersensitive response9.15E-08
4GO:0010200: response to chitin9.76E-06
5GO:0000187: activation of MAPK activity2.19E-05
6GO:0002237: response to molecule of bacterial origin3.98E-05
7GO:0042742: defense response to bacterium4.01E-05
8GO:0070588: calcium ion transmembrane transport4.79E-05
9GO:2000037: regulation of stomatal complex patterning1.29E-04
10GO:0010365: positive regulation of ethylene biosynthetic process2.39E-04
11GO:0051938: L-glutamate import2.39E-04
12GO:0051245: negative regulation of cellular defense response2.39E-04
13GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.39E-04
14GO:0010941: regulation of cell death2.39E-04
15GO:0010421: hydrogen peroxide-mediated programmed cell death2.39E-04
16GO:0010045: response to nickel cation2.39E-04
17GO:0007229: integrin-mediated signaling pathway2.39E-04
18GO:0080157: regulation of plant-type cell wall organization or biogenesis2.39E-04
19GO:0050691: regulation of defense response to virus by host2.39E-04
20GO:1902065: response to L-glutamate2.39E-04
21GO:0015784: GDP-mannose transport2.39E-04
22GO:0007064: mitotic sister chromatid cohesion4.48E-04
23GO:0043069: negative regulation of programmed cell death4.48E-04
24GO:0010042: response to manganese ion5.29E-04
25GO:0002221: pattern recognition receptor signaling pathway5.29E-04
26GO:0043091: L-arginine import5.29E-04
27GO:0015802: basic amino acid transport5.29E-04
28GO:0008219: cell death5.78E-04
29GO:0010229: inflorescence development6.71E-04
30GO:0006952: defense response7.20E-04
31GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity8.60E-04
32GO:0010581: regulation of starch biosynthetic process8.60E-04
33GO:0002230: positive regulation of defense response to virus by host8.60E-04
34GO:0009062: fatty acid catabolic process8.60E-04
35GO:0051176: positive regulation of sulfur metabolic process8.60E-04
36GO:0015783: GDP-fucose transport8.60E-04
37GO:0009617: response to bacterium1.15E-03
38GO:0072334: UDP-galactose transmembrane transport1.23E-03
39GO:0033014: tetrapyrrole biosynthetic process1.23E-03
40GO:0010306: rhamnogalacturonan II biosynthetic process1.23E-03
41GO:0006612: protein targeting to membrane1.23E-03
42GO:0015696: ammonium transport1.23E-03
43GO:0046713: borate transport1.23E-03
44GO:0000165: MAPK cascade1.35E-03
45GO:0009814: defense response, incompatible interaction1.36E-03
46GO:0031348: negative regulation of defense response1.36E-03
47GO:0010227: floral organ abscission1.48E-03
48GO:0046345: abscisic acid catabolic process1.64E-03
49GO:0006085: acetyl-CoA biosynthetic process1.64E-03
50GO:0045088: regulation of innate immune response1.64E-03
51GO:0072488: ammonium transmembrane transport1.64E-03
52GO:0010363: regulation of plant-type hypersensitive response1.64E-03
53GO:0022622: root system development1.64E-03
54GO:2000038: regulation of stomatal complex development1.64E-03
55GO:0080142: regulation of salicylic acid biosynthetic process1.64E-03
56GO:0010225: response to UV-C2.09E-03
57GO:0045487: gibberellin catabolic process2.09E-03
58GO:0009697: salicylic acid biosynthetic process2.09E-03
59GO:0080167: response to karrikin2.37E-03
60GO:0002229: defense response to oomycetes2.50E-03
61GO:0006891: intra-Golgi vesicle-mediated transport2.50E-03
62GO:1900425: negative regulation of defense response to bacterium2.57E-03
63GO:0046777: protein autophosphorylation2.62E-03
64GO:0050832: defense response to fungus2.90E-03
65GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.09E-03
66GO:0042372: phylloquinone biosynthetic process3.09E-03
67GO:0051607: defense response to virus3.41E-03
68GO:0001666: response to hypoxia3.61E-03
69GO:0046470: phosphatidylcholine metabolic process3.64E-03
70GO:1900056: negative regulation of leaf senescence3.64E-03
71GO:0015937: coenzyme A biosynthetic process3.64E-03
72GO:0010038: response to metal ion3.64E-03
73GO:0010161: red light signaling pathway3.64E-03
74GO:0009627: systemic acquired resistance4.03E-03
75GO:0006468: protein phosphorylation4.74E-03
76GO:0071482: cellular response to light stimulus4.84E-03
77GO:0048193: Golgi vesicle transport4.84E-03
78GO:2000031: regulation of salicylic acid mediated signaling pathway4.84E-03
79GO:0051865: protein autoubiquitination5.48E-03
80GO:0090333: regulation of stomatal closure5.48E-03
81GO:0006783: heme biosynthetic process5.48E-03
82GO:0010112: regulation of systemic acquired resistance5.48E-03
83GO:0007166: cell surface receptor signaling pathway5.75E-03
84GO:0045087: innate immune response5.96E-03
85GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.15E-03
86GO:0010449: root meristem growth6.15E-03
87GO:0009870: defense response signaling pathway, resistance gene-dependent6.85E-03
88GO:0006032: chitin catabolic process6.85E-03
89GO:0009682: induced systemic resistance7.58E-03
90GO:0000272: polysaccharide catabolic process7.58E-03
91GO:0000209: protein polyubiquitination7.99E-03
92GO:0012501: programmed cell death8.33E-03
93GO:0006890: retrograde vesicle-mediated transport, Golgi to ER8.33E-03
94GO:0009785: blue light signaling pathway9.11E-03
95GO:0055046: microgametogenesis9.11E-03
96GO:0031347: regulation of defense response9.31E-03
97GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process9.31E-03
98GO:0034605: cellular response to heat9.92E-03
99GO:0007034: vacuolar transport9.92E-03
100GO:0042343: indole glucosinolate metabolic process1.07E-02
101GO:0007165: signal transduction1.13E-02
102GO:0009909: regulation of flower development1.15E-02
103GO:0006071: glycerol metabolic process1.16E-02
104GO:0009863: salicylic acid mediated signaling pathway1.25E-02
105GO:0048278: vesicle docking1.43E-02
106GO:0031408: oxylipin biosynthetic process1.43E-02
107GO:0003333: amino acid transmembrane transport1.43E-02
108GO:0016998: cell wall macromolecule catabolic process1.43E-02
109GO:0051260: protein homooligomerization1.43E-02
110GO:0098542: defense response to other organism1.43E-02
111GO:0010017: red or far-red light signaling pathway1.53E-02
112GO:0016226: iron-sulfur cluster assembly1.53E-02
113GO:2000022: regulation of jasmonic acid mediated signaling pathway1.53E-02
114GO:0009409: response to cold1.53E-02
115GO:0071456: cellular response to hypoxia1.53E-02
116GO:0009686: gibberellin biosynthetic process1.62E-02
117GO:0001944: vasculature development1.62E-02
118GO:0009625: response to insect1.62E-02
119GO:0042147: retrograde transport, endosome to Golgi1.82E-02
120GO:0070417: cellular response to cold1.82E-02
121GO:0042391: regulation of membrane potential1.93E-02
122GO:0000271: polysaccharide biosynthetic process1.93E-02
123GO:0010118: stomatal movement1.93E-02
124GO:0045489: pectin biosynthetic process2.03E-02
125GO:0071472: cellular response to salt stress2.03E-02
126GO:0048544: recognition of pollen2.14E-02
127GO:0061025: membrane fusion2.14E-02
128GO:0016567: protein ubiquitination2.32E-02
129GO:0010193: response to ozone2.36E-02
130GO:0006635: fatty acid beta-oxidation2.36E-02
131GO:0016032: viral process2.47E-02
132GO:0009639: response to red or far red light2.71E-02
133GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.87E-02
134GO:0006470: protein dephosphorylation2.93E-02
135GO:0000910: cytokinesis2.95E-02
136GO:0006979: response to oxidative stress2.97E-02
137GO:0010468: regulation of gene expression3.06E-02
138GO:0009911: positive regulation of flower development3.07E-02
139GO:0009615: response to virus3.07E-02
140GO:0009816: defense response to bacterium, incompatible interaction3.19E-02
141GO:0006906: vesicle fusion3.32E-02
142GO:0015995: chlorophyll biosynthetic process3.45E-02
143GO:0048573: photoperiodism, flowering3.45E-02
144GO:0016049: cell growth3.58E-02
145GO:0009611: response to wounding3.83E-02
146GO:0006499: N-terminal protein myristoylation3.97E-02
147GO:0009631: cold acclimation4.11E-02
148GO:0010043: response to zinc ion4.11E-02
149GO:0015031: protein transport4.15E-02
150GO:0006970: response to osmotic stress4.26E-02
151GO:0009867: jasmonic acid mediated signaling pathway4.39E-02
152GO:0016051: carbohydrate biosynthetic process4.39E-02
153GO:0030001: metal ion transport4.81E-02
154GO:0006887: exocytosis4.95E-02
RankGO TermAdjusted P value
1GO:0005458: GDP-mannose transmembrane transporter activity0.00E+00
2GO:0005388: calcium-transporting ATPase activity3.25E-05
3GO:0043531: ADP binding5.83E-05
4GO:0016301: kinase activity1.11E-04
5GO:0004708: MAP kinase kinase activity2.16E-04
6GO:0015085: calcium ion transmembrane transporter activity2.39E-04
7GO:0080042: ADP-glucose pyrophosphohydrolase activity2.39E-04
8GO:0004325: ferrochelatase activity2.39E-04
9GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.39E-04
10GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.39E-04
11GO:0008909: isochorismate synthase activity2.39E-04
12GO:0046027: phospholipid:diacylglycerol acyltransferase activity2.39E-04
13GO:0008809: carnitine racemase activity2.39E-04
14GO:0017110: nucleoside-diphosphatase activity5.29E-04
15GO:0080041: ADP-ribose pyrophosphohydrolase activity5.29E-04
16GO:0004594: pantothenate kinase activity5.29E-04
17GO:0005457: GDP-fucose transmembrane transporter activity8.60E-04
18GO:0015189: L-lysine transmembrane transporter activity1.23E-03
19GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.23E-03
20GO:0015181: arginine transmembrane transporter activity1.23E-03
21GO:0004165: dodecenoyl-CoA delta-isomerase activity1.23E-03
22GO:0004674: protein serine/threonine kinase activity1.37E-03
23GO:0005313: L-glutamate transmembrane transporter activity1.64E-03
24GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.64E-03
25GO:0005249: voltage-gated potassium channel activity1.89E-03
26GO:0010294: abscisic acid glucosyltransferase activity2.09E-03
27GO:0008374: O-acyltransferase activity2.09E-03
28GO:0005459: UDP-galactose transmembrane transporter activity2.09E-03
29GO:0047631: ADP-ribose diphosphatase activity2.09E-03
30GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.09E-03
31GO:0004709: MAP kinase kinase kinase activity2.57E-03
32GO:0000210: NAD+ diphosphatase activity2.57E-03
33GO:0035252: UDP-xylosyltransferase activity2.57E-03
34GO:0008519: ammonium transmembrane transporter activity2.57E-03
35GO:0005524: ATP binding3.01E-03
36GO:0019900: kinase binding3.09E-03
37GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.21E-03
38GO:0005338: nucleotide-sugar transmembrane transporter activity3.64E-03
39GO:0004620: phospholipase activity3.64E-03
40GO:0004714: transmembrane receptor protein tyrosine kinase activity4.23E-03
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.44E-03
42GO:0004630: phospholipase D activity4.84E-03
43GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity4.84E-03
44GO:0015174: basic amino acid transmembrane transporter activity6.15E-03
45GO:0008047: enzyme activator activity6.85E-03
46GO:0004568: chitinase activity6.85E-03
47GO:0008559: xenobiotic-transporting ATPase activity7.58E-03
48GO:0047372: acylglycerol lipase activity7.58E-03
49GO:0015095: magnesium ion transmembrane transporter activity9.11E-03
50GO:0005262: calcium channel activity9.11E-03
51GO:0030553: cGMP binding1.07E-02
52GO:0008061: chitin binding1.07E-02
53GO:0030552: cAMP binding1.07E-02
54GO:0016757: transferase activity, transferring glycosyl groups1.09E-02
55GO:0008234: cysteine-type peptidase activity1.15E-02
56GO:0005216: ion channel activity1.34E-02
57GO:0033612: receptor serine/threonine kinase binding1.43E-02
58GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.53E-02
59GO:0003924: GTPase activity1.82E-02
60GO:0005516: calmodulin binding1.89E-02
61GO:0030551: cyclic nucleotide binding1.93E-02
62GO:0003713: transcription coactivator activity2.03E-02
63GO:0010181: FMN binding2.14E-02
64GO:0004197: cysteine-type endopeptidase activity2.47E-02
65GO:0008375: acetylglucosaminyltransferase activity3.32E-02
66GO:0004721: phosphoprotein phosphatase activity3.45E-02
67GO:0003682: chromatin binding4.18E-02
68GO:0000149: SNARE binding4.67E-02
69GO:0004712: protein serine/threonine/tyrosine kinase activity4.67E-02
70GO:0004842: ubiquitin-protein transferase activity4.68E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane3.34E-05
2GO:0008076: voltage-gated potassium channel complex1.23E-03
3GO:0030173: integral component of Golgi membrane3.09E-03
4GO:0016021: integral component of membrane3.77E-03
5GO:0005887: integral component of plasma membrane6.81E-03
6GO:0030176: integral component of endoplasmic reticulum membrane1.07E-02
7GO:0005795: Golgi stack1.07E-02
8GO:0043234: protein complex1.16E-02
9GO:0005769: early endosome1.16E-02
10GO:0010008: endosome membrane1.27E-02
11GO:0012505: endomembrane system1.44E-02
12GO:0009504: cell plate2.25E-02
13GO:0000325: plant-type vacuole4.11E-02
14GO:0000139: Golgi membrane4.55E-02
15GO:0031201: SNARE complex4.95E-02
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Gene type



Gene DE type