Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G41490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002191: cap-dependent translational initiation0.00E+00
2GO:0034976: response to endoplasmic reticulum stress5.53E-06
3GO:0006511: ubiquitin-dependent protein catabolic process5.98E-06
4GO:0031124: mRNA 3'-end processing1.83E-05
5GO:0046686: response to cadmium ion3.30E-05
6GO:0055074: calcium ion homeostasis3.35E-05
7GO:0006515: misfolded or incompletely synthesized protein catabolic process5.17E-05
8GO:0010363: regulation of plant-type hypersensitive response7.23E-05
9GO:0001731: formation of translation preinitiation complex1.20E-04
10GO:0048827: phyllome development1.20E-04
11GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation1.20E-04
12GO:0006457: protein folding1.37E-04
13GO:0048766: root hair initiation2.03E-04
14GO:0009932: cell tip growth2.33E-04
15GO:0006413: translational initiation2.55E-04
16GO:0006379: mRNA cleavage2.64E-04
17GO:0046856: phosphatidylinositol dephosphorylation3.61E-04
18GO:0048765: root hair cell differentiation3.61E-04
19GO:0006378: mRNA polyadenylation3.61E-04
20GO:0010075: regulation of meristem growth4.30E-04
21GO:0006446: regulation of translational initiation4.66E-04
22GO:0009934: regulation of meristem structural organization4.66E-04
23GO:0010053: root epidermal cell differentiation5.02E-04
24GO:0006338: chromatin remodeling5.76E-04
25GO:0007005: mitochondrion organization6.92E-04
26GO:0009306: protein secretion7.72E-04
27GO:0048868: pollen tube development8.97E-04
28GO:0009567: double fertilization forming a zygote and endosperm1.16E-03
29GO:0009651: response to salt stress1.17E-03
30GO:0016579: protein deubiquitination1.25E-03
31GO:0006888: ER to Golgi vesicle-mediated transport1.45E-03
32GO:0010043: response to zinc ion1.70E-03
33GO:0051603: proteolysis involved in cellular protein catabolic process2.68E-03
34GO:0016569: covalent chromatin modification3.19E-03
35GO:0009553: embryo sac development3.25E-03
36GO:0009409: response to cold3.48E-03
37GO:0010228: vegetative to reproductive phase transition of meristem4.97E-03
38GO:0045454: cell redox homeostasis8.56E-03
39GO:0006397: mRNA processing1.02E-02
40GO:0009908: flower development1.38E-02
41GO:0009414: response to water deprivation2.42E-02
42GO:0042742: defense response to bacterium2.46E-02
43GO:0006979: response to oxidative stress2.47E-02
44GO:0007275: multicellular organism development3.98E-02
45GO:0009793: embryo development ending in seed dormancy4.47E-02
RankGO TermAdjusted P value
1GO:0098808: mRNA cap binding0.00E+00
2GO:0004298: threonine-type endopeptidase activity3.03E-08
3GO:0070361: mitochondrial light strand promoter anti-sense binding1.83E-05
4GO:0051731: polynucleotide 5'-hydroxyl-kinase activity1.83E-05
5GO:0008233: peptidase activity2.08E-05
6GO:0051082: unfolded protein binding1.55E-04
7GO:0003743: translation initiation factor activity3.20E-04
8GO:0004129: cytochrome-c oxidase activity3.61E-04
9GO:0036459: thiol-dependent ubiquitinyl hydrolase activity6.53E-04
10GO:0004176: ATP-dependent peptidase activity6.53E-04
11GO:0003756: protein disulfide isomerase activity7.72E-04
12GO:0004402: histone acetyltransferase activity8.55E-04
13GO:0016853: isomerase activity9.39E-04
14GO:0004197: cysteine-type endopeptidase activity1.07E-03
15GO:0008236: serine-type peptidase activity1.50E-03
16GO:0004252: serine-type endopeptidase activity4.15E-03
17GO:0016787: hydrolase activity5.48E-03
18GO:0004722: protein serine/threonine phosphatase activity9.13E-03
19GO:0003924: GTPase activity9.92E-03
20GO:0016887: ATPase activity1.35E-02
21GO:0030246: carbohydrate binding1.84E-02
22GO:0005524: ATP binding1.92E-02
23GO:0005525: GTP binding2.12E-02
24GO:0005509: calcium ion binding2.32E-02
25GO:0046872: metal ion binding2.39E-02
RankGO TermAdjusted P value
1GO:0005839: proteasome core complex3.03E-08
2GO:0019773: proteasome core complex, alpha-subunit complex1.01E-06
3GO:0000502: proteasome complex1.52E-06
4GO:0005774: vacuolar membrane9.32E-06
5GO:0005788: endoplasmic reticulum lumen3.34E-05
6GO:0005849: mRNA cleavage factor complex5.17E-05
7GO:0016282: eukaryotic 43S preinitiation complex1.20E-04
8GO:0033290: eukaryotic 48S preinitiation complex1.46E-04
9GO:0005740: mitochondrial envelope3.28E-04
10GO:0048046: apoplast1.29E-03
11GO:0005773: vacuole2.07E-03
12GO:0005829: cytosol2.69E-03
13GO:0005783: endoplasmic reticulum2.93E-03
14GO:0005759: mitochondrial matrix4.52E-03
15GO:0022626: cytosolic ribosome1.44E-02
16GO:0005802: trans-Golgi network2.08E-02
17GO:0005737: cytoplasm2.19E-02
18GO:0005622: intracellular2.24E-02
19GO:0005768: endosome2.28E-02
20GO:0009505: plant-type cell wall2.89E-02
21GO:0009506: plasmodesma3.41E-02
22GO:0005730: nucleolus3.58E-02
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Gene type



Gene DE type