co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G41410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
3	GO:0071327: cellular response to trehalose stimulus	0.00E+00
4	GO:0033198: response to ATP	0.00E+00
5	GO:1900367: positive regulation of defense response to insect	0.00E+00
6	GO:0002764: immune response-regulating signaling pathway	0.00E+00
7	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
8	GO:0033587: shikimate biosynthetic process	0.00E+00
9	GO:0032491: detection of molecule of fungal origin	0.00E+00
10	GO:0009268: response to pH	0.00E+00
11	GO:0042742: defense response to bacterium	1.76E-06
12	GO:0031348: negative regulation of defense response	5.26E-06
13	GO:0009751: response to salicylic acid	5.33E-06
14	GO:0006468: protein phosphorylation	1.57E-05
15	GO:0009626: plant-type hypersensitive response	4.66E-05
16	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.31E-04
17	GO:0010365: positive regulation of ethylene biosynthetic process	2.68E-04
18	GO:0051938: L-glutamate import	2.68E-04
19	GO:0015969: guanosine tetraphosphate metabolic process	2.68E-04
20	GO:0010941: regulation of cell death	2.68E-04
21	GO:0051180: vitamin transport	2.68E-04
22	GO:0006562: proline catabolic process	2.68E-04
23	GO:0019673: GDP-mannose metabolic process	2.68E-04
24	GO:0030974: thiamine pyrophosphate transport	2.68E-04
25	GO:1901183: positive regulation of camalexin biosynthetic process	2.68E-04
26	GO:0010204: defense response signaling pathway, resistance gene-independent	3.14E-04
27	GO:0009620: response to fungus	4.28E-04
28	GO:0006904: vesicle docking involved in exocytosis	4.36E-04
29	GO:0006952: defense response	4.47E-04
30	GO:1900426: positive regulation of defense response to bacterium	4.50E-04
31	GO:0046939: nucleotide phosphorylation	5.89E-04
32	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.89E-04
33	GO:0010133: proline catabolic process to glutamate	5.89E-04
34	GO:0015802: basic amino acid transport	5.89E-04
35	GO:0080185: effector dependent induction by symbiont of host immune response	5.89E-04
36	GO:0010618: aerenchyma formation	5.89E-04
37	GO:1902066: regulation of cell wall pectin metabolic process	5.89E-04
38	GO:0002240: response to molecule of oomycetes origin	5.89E-04
39	GO:0031349: positive regulation of defense response	5.89E-04
40	GO:0015893: drug transport	5.89E-04
41	GO:0045732: positive regulation of protein catabolic process	5.89E-04
42	GO:0043066: negative regulation of apoptotic process	5.89E-04
43	GO:0015865: purine nucleotide transport	5.89E-04
44	GO:0019725: cellular homeostasis	5.89E-04
45	GO:0043091: L-arginine import	5.89E-04
46	GO:0046777: protein autophosphorylation	7.36E-04
47	GO:0034605: cellular response to heat	8.84E-04
48	GO:0002237: response to molecule of bacterial origin	8.84E-04
49	GO:0045836: positive regulation of meiotic nuclear division	9.55E-04
50	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	9.55E-04
51	GO:0010498: proteasomal protein catabolic process	9.55E-04
52	GO:1901672: positive regulation of systemic acquired resistance	9.55E-04
53	GO:0048586: regulation of long-day photoperiodism, flowering	9.55E-04
54	GO:0032922: circadian regulation of gene expression	9.55E-04
55	GO:0016045: detection of bacterium	9.55E-04
56	GO:0034051: negative regulation of plant-type hypersensitive response	9.55E-04
57	GO:0010359: regulation of anion channel activity	9.55E-04
58	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	9.55E-04
59	GO:0051176: positive regulation of sulfur metabolic process	9.55E-04
60	GO:0009611: response to wounding	9.62E-04
61	GO:0009863: salicylic acid mediated signaling pathway	1.21E-03
62	GO:0046836: glycolipid transport	1.36E-03
63	GO:0000187: activation of MAPK activity	1.36E-03
64	GO:0046902: regulation of mitochondrial membrane permeability	1.36E-03
65	GO:0010104: regulation of ethylene-activated signaling pathway	1.36E-03
66	GO:0072583: clathrin-dependent endocytosis	1.36E-03
67	GO:0006537: glutamate biosynthetic process	1.36E-03
68	GO:0071323: cellular response to chitin	1.36E-03
69	GO:0006986: response to unfolded protein	1.36E-03
70	GO:0009617: response to bacterium	1.47E-03
71	GO:0006855: drug transmembrane transport	1.59E-03
72	GO:0016226: iron-sulfur cluster assembly	1.60E-03
73	GO:0060548: negative regulation of cell death	1.83E-03
74	GO:0045227: capsule polysaccharide biosynthetic process	1.83E-03
75	GO:0033358: UDP-L-arabinose biosynthetic process	1.83E-03
76	GO:0071219: cellular response to molecule of bacterial origin	1.83E-03
77	GO:0080142: regulation of salicylic acid biosynthetic process	1.83E-03
78	GO:0006486: protein glycosylation	1.91E-03
79	GO:0018344: protein geranylgeranylation	2.33E-03
80	GO:0010225: response to UV-C	2.33E-03
81	GO:0045927: positive regulation of growth	2.33E-03
82	GO:0009697: salicylic acid biosynthetic process	2.33E-03
83	GO:0006970: response to osmotic stress	2.45E-03
84	GO:0010405: arabinogalactan protein metabolic process	2.88E-03
85	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.88E-03
86	GO:1900425: negative regulation of defense response to bacterium	2.88E-03
87	GO:0010337: regulation of salicylic acid metabolic process	2.88E-03
88	GO:0002238: response to molecule of fungal origin	2.88E-03
89	GO:0010942: positive regulation of cell death	2.88E-03
90	GO:0010200: response to chitin	3.20E-03
91	GO:2000037: regulation of stomatal complex patterning	3.46E-03
92	GO:0010310: regulation of hydrogen peroxide metabolic process	3.46E-03
93	GO:0009423: chorismate biosynthetic process	3.46E-03
94	GO:1900056: negative regulation of leaf senescence	4.08E-03
95	GO:0070370: cellular heat acclimation	4.08E-03
96	GO:1900057: positive regulation of leaf senescence	4.08E-03
97	GO:0001666: response to hypoxia	4.25E-03
98	GO:0009816: defense response to bacterium, incompatible interaction	4.49E-03
99	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.73E-03
100	GO:0030162: regulation of proteolysis	4.73E-03
101	GO:0006491: N-glycan processing	4.73E-03
102	GO:0045010: actin nucleation	4.73E-03
103	GO:0009627: systemic acquired resistance	4.74E-03
104	GO:2000031: regulation of salicylic acid mediated signaling pathway	5.42E-03
105	GO:0010099: regulation of photomorphogenesis	5.42E-03
106	GO:0009932: cell tip growth	5.42E-03
107	GO:0030968: endoplasmic reticulum unfolded protein response	5.42E-03
108	GO:0009408: response to heat	5.50E-03
109	GO:0009817: defense response to fungus, incompatible interaction	5.54E-03
110	GO:0006499: N-terminal protein myristoylation	6.11E-03
111	GO:0009060: aerobic respiration	6.14E-03
112	GO:0006098: pentose-phosphate shunt	6.14E-03
113	GO:0090333: regulation of stomatal closure	6.14E-03
114	GO:0048268: clathrin coat assembly	6.90E-03
115	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.90E-03
116	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.90E-03
117	GO:0009867: jasmonic acid mediated signaling pathway	7.02E-03
118	GO:0045087: innate immune response	7.02E-03
119	GO:0009873: ethylene-activated signaling pathway	8.11E-03
120	GO:0006887: exocytosis	8.35E-03
121	GO:0009073: aromatic amino acid family biosynthetic process	8.50E-03
122	GO:0051707: response to other organism	9.06E-03
123	GO:0008361: regulation of cell size	9.35E-03
124	GO:0002213: defense response to insect	9.35E-03
125	GO:0015706: nitrate transport	9.35E-03
126	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.35E-03
127	GO:0010229: inflorescence development	1.02E-02
128	GO:0018107: peptidyl-threonine phosphorylation	1.02E-02
129	GO:0055046: microgametogenesis	1.02E-02
130	GO:2000028: regulation of photoperiodism, flowering	1.02E-02
131	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.10E-02
132	GO:0009266: response to temperature stimulus	1.11E-02
133	GO:0007034: vacuolar transport	1.11E-02
134	GO:0046854: phosphatidylinositol phosphorylation	1.21E-02
135	GO:0010053: root epidermal cell differentiation	1.21E-02
136	GO:0009225: nucleotide-sugar metabolic process	1.21E-02
137	GO:0010167: response to nitrate	1.21E-02
138	GO:0009809: lignin biosynthetic process	1.22E-02
139	GO:0034976: response to endoplasmic reticulum stress	1.30E-02
140	GO:0006487: protein N-linked glycosylation	1.40E-02
141	GO:0009695: jasmonic acid biosynthetic process	1.50E-02
142	GO:0007165: signal transduction	1.55E-02
143	GO:0051321: meiotic cell cycle	1.61E-02
144	GO:0003333: amino acid transmembrane transport	1.61E-02
145	GO:0009737: response to abscisic acid	1.62E-02
146	GO:0071456: cellular response to hypoxia	1.71E-02
147	GO:0010017: red or far-red light signaling pathway	1.71E-02
148	GO:0009814: defense response, incompatible interaction	1.71E-02
149	GO:0018105: peptidyl-serine phosphorylation	1.80E-02
150	GO:0009625: response to insect	1.82E-02
151	GO:0010227: floral organ abscission	1.82E-02
152	GO:0006012: galactose metabolic process	1.82E-02
153	GO:0009561: megagametogenesis	1.94E-02
154	GO:0009306: protein secretion	1.94E-02
155	GO:0009409: response to cold	2.03E-02
156	GO:0016310: phosphorylation	2.12E-02
157	GO:0006885: regulation of pH	2.29E-02
158	GO:0048544: recognition of pollen	2.41E-02
159	GO:0009753: response to jasmonic acid	2.45E-02
160	GO:0002229: defense response to oomycetes	2.65E-02
161	GO:0010193: response to ozone	2.65E-02
162	GO:0016032: viral process	2.78E-02
163	GO:0010150: leaf senescence	3.02E-02
164	GO:0019760: glucosinolate metabolic process	3.04E-02
165	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.38E-02
166	GO:0009615: response to virus	3.45E-02
167	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.59E-02
168	GO:0009414: response to water deprivation	3.60E-02
169	GO:0042128: nitrate assimilation	3.73E-02
170	GO:0009813: flavonoid biosynthetic process	4.32E-02
171	GO:0010043: response to zinc ion	4.62E-02
172	GO:0007568: aging	4.62E-02
173	GO:0009631: cold acclimation	4.62E-02
174	GO:0010119: regulation of stomatal movement	4.62E-02
175	GO:0035556: intracellular signal transduction	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
2	GO:0005522: profilin binding	0.00E+00
3	GO:0004107: chorismate synthase activity	0.00E+00
4	GO:0005212: structural constituent of eye lens	0.00E+00
5	GO:2001080: chitosan binding	0.00E+00
6	GO:0004674: protein serine/threonine kinase activity	1.85E-07
7	GO:0016301: kinase activity	5.43E-07
8	GO:0005524: ATP binding	2.21E-05
9	GO:0019199: transmembrane receptor protein kinase activity	4.83E-05
10	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	7.68E-05
11	GO:0032050: clathrin heavy chain binding	2.68E-04
12	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.68E-04
13	GO:1901149: salicylic acid binding	2.68E-04
14	GO:0090422: thiamine pyrophosphate transporter activity	2.68E-04
15	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.68E-04
16	GO:0008446: GDP-mannose 4,6-dehydratase activity	2.68E-04
17	GO:0004657: proline dehydrogenase activity	2.68E-04
18	GO:0048531: beta-1,3-galactosyltransferase activity	5.89E-04
19	GO:0008728: GTP diphosphokinase activity	5.89E-04
20	GO:0005515: protein binding	7.25E-04
21	GO:0015238: drug transmembrane transporter activity	7.55E-04
22	GO:0016174: NAD(P)H oxidase activity	9.55E-04
23	GO:0046423: allene-oxide cyclase activity	9.55E-04
24	GO:0043424: protein histidine kinase binding	1.33E-03
25	GO:0015189: L-lysine transmembrane transporter activity	1.36E-03
26	GO:0017089: glycolipid transporter activity	1.36E-03
27	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.36E-03
28	GO:0019201: nucleotide kinase activity	1.36E-03
29	GO:0015181: arginine transmembrane transporter activity	1.36E-03
30	GO:0050373: UDP-arabinose 4-epimerase activity	1.83E-03
31	GO:0051861: glycolipid binding	1.83E-03
32	GO:0005313: L-glutamate transmembrane transporter activity	1.83E-03
33	GO:0045431: flavonol synthase activity	2.33E-03
34	GO:0005471: ATP:ADP antiporter activity	2.33E-03
35	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.88E-03
36	GO:0004559: alpha-mannosidase activity	3.46E-03
37	GO:0004017: adenylate kinase activity	3.46E-03
38	GO:0003978: UDP-glucose 4-epimerase activity	3.46E-03
39	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.46E-03
40	GO:0005215: transporter activity	4.53E-03
41	GO:0052747: sinapyl alcohol dehydrogenase activity	4.73E-03
42	GO:0004708: MAP kinase kinase activity	4.73E-03
43	GO:0008271: secondary active sulfate transmembrane transporter activity	5.42E-03
44	GO:0004430: 1-phosphatidylinositol 4-kinase activity	5.42E-03
45	GO:0015297: antiporter activity	5.64E-03
46	GO:0015112: nitrate transmembrane transporter activity	6.90E-03
47	GO:0015174: basic amino acid transmembrane transporter activity	6.90E-03
48	GO:0004568: chitinase activity	7.68E-03
49	GO:0005545: 1-phosphatidylinositol binding	7.68E-03
50	GO:0008047: enzyme activator activity	7.68E-03
51	GO:0004713: protein tyrosine kinase activity	7.68E-03
52	GO:0008559: xenobiotic-transporting ATPase activity	8.50E-03
53	GO:0005543: phospholipid binding	8.50E-03
54	GO:0015116: sulfate transmembrane transporter activity	9.35E-03
55	GO:0008378: galactosyltransferase activity	9.35E-03
56	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.35E-03
57	GO:0031072: heat shock protein binding	1.02E-02
58	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.02E-02
59	GO:0043531: ADP binding	1.17E-02
60	GO:0008061: chitin binding	1.21E-02
61	GO:0016298: lipase activity	1.27E-02
62	GO:0031625: ubiquitin protein ligase binding	1.36E-02
63	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.50E-02
64	GO:0033612: receptor serine/threonine kinase binding	1.61E-02
65	GO:0005451: monovalent cation:proton antiporter activity	2.17E-02
66	GO:0030276: clathrin binding	2.29E-02
67	GO:0004672: protein kinase activity	2.33E-02
68	GO:0015299: solute:proton antiporter activity	2.41E-02
69	GO:0010181: FMN binding	2.41E-02
70	GO:0005525: GTP binding	2.76E-02
71	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.82E-02
72	GO:0051015: actin filament binding	2.91E-02
73	GO:0015385: sodium:proton antiporter activity	2.91E-02
74	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.18E-02
75	GO:0005509: calcium ion binding	3.32E-02
76	GO:0043565: sequence-specific DNA binding	3.58E-02
77	GO:0008375: acetylglucosaminyltransferase activity	3.73E-02
78	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.73E-02
79	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.83E-02
80	GO:0004683: calmodulin-dependent protein kinase activity	3.88E-02
81	GO:0004806: triglyceride lipase activity	3.88E-02
82	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.02E-02
83	GO:0008168: methyltransferase activity	4.49E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.84E-05
2	GO:0005911: cell-cell junction	2.68E-04
3	GO:0005953: CAAX-protein geranylgeranyltransferase complex	2.68E-04
4	GO:0005901: caveola	5.89E-04
5	GO:0030139: endocytic vesicle	9.55E-04
6	GO:0000145: exocyst	3.14E-03
7	GO:0005654: nucleoplasm	3.83E-03
8	GO:0005740: mitochondrial envelope	7.68E-03
9	GO:0030125: clathrin vesicle coat	7.68E-03
10	GO:0090404: pollen tube tip	8.50E-03
11	GO:0048471: perinuclear region of cytoplasm	8.50E-03
12	GO:0016021: integral component of membrane	1.15E-02
13	GO:0005635: nuclear envelope	1.31E-02
14	GO:0005758: mitochondrial intermembrane space	1.40E-02
15	GO:0005905: clathrin-coated pit	1.61E-02
16	GO:0030136: clathrin-coated vesicle	2.05E-02
17	GO:0005770: late endosome	2.29E-02
18	GO:0032580: Golgi cisterna membrane	3.04E-02
19	GO:0005794: Golgi apparatus	3.23E-02
20	GO:0005774: vacuolar membrane	4.00E-02
21	GO:0019005: SCF ubiquitin ligase complex	4.17E-02
22	GO:0000325: plant-type vacuole	4.62E-02