co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G40950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1902065: response to L-glutamate	7.75E-05
2	GO:1903648: positive regulation of chlorophyll catabolic process	7.75E-05
3	GO:0034975: protein folding in endoplasmic reticulum	7.75E-05
4	GO:0000077: DNA damage checkpoint	7.75E-05
5	GO:1990641: response to iron ion starvation	7.75E-05
6	GO:0000303: response to superoxide	7.75E-05
7	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	7.75E-05
8	GO:0006101: citrate metabolic process	1.85E-04
9	GO:0040020: regulation of meiotic nuclear division	1.85E-04
10	GO:0009812: flavonoid metabolic process	1.85E-04
11	GO:0052542: defense response by callose deposition	1.85E-04
12	GO:1901562: response to paraquat	3.11E-04
13	GO:0006517: protein deglycosylation	3.11E-04
14	GO:0009306: protein secretion	3.62E-04
15	GO:0071323: cellular response to chitin	4.49E-04
16	GO:0050482: arachidonic acid secretion	4.49E-04
17	GO:0006809: nitric oxide biosynthetic process	4.49E-04
18	GO:0000003: reproduction	5.98E-04
19	GO:0022622: root system development	5.98E-04
20	GO:0006097: glyoxylate cycle	7.57E-04
21	GO:0009738: abscisic acid-activated signaling pathway	9.08E-04
22	GO:0006354: DNA-templated transcription, elongation	9.24E-04
23	GO:0045087: innate immune response	1.29E-03
24	GO:1900057: positive regulation of leaf senescence	1.29E-03
25	GO:0030307: positive regulation of cell growth	1.29E-03
26	GO:0010044: response to aluminum ion	1.29E-03
27	GO:0006457: protein folding	1.40E-03
28	GO:0006102: isocitrate metabolic process	1.48E-03
29	GO:0006644: phospholipid metabolic process	1.48E-03
30	GO:0006491: N-glycan processing	1.48E-03
31	GO:1900150: regulation of defense response to fungus	1.48E-03
32	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	1.69E-03
33	GO:0006379: mRNA cleavage	1.91E-03
34	GO:0007338: single fertilization	1.91E-03
35	GO:0010332: response to gamma radiation	1.91E-03
36	GO:0009846: pollen germination	2.06E-03
37	GO:0008202: steroid metabolic process	2.14E-03
38	GO:0009086: methionine biosynthetic process	2.14E-03
39	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.37E-03
40	GO:0009408: response to heat	2.51E-03
41	GO:0006913: nucleocytoplasmic transport	2.61E-03
42	GO:0052544: defense response by callose deposition in cell wall	2.61E-03
43	GO:0012501: programmed cell death	2.86E-03
44	GO:0045037: protein import into chloroplast stroma	2.86E-03
45	GO:0018107: peptidyl-threonine phosphorylation	3.12E-03
46	GO:0010102: lateral root morphogenesis	3.12E-03
47	GO:0007034: vacuolar transport	3.38E-03
48	GO:0034605: cellular response to heat	3.38E-03
49	GO:0070588: calcium ion transmembrane transport	3.66E-03
50	GO:0007030: Golgi organization	3.66E-03
51	GO:0009901: anther dehiscence	3.66E-03
52	GO:0034976: response to endoplasmic reticulum stress	3.94E-03
53	GO:2000377: regulation of reactive oxygen species metabolic process	4.23E-03
54	GO:0009863: salicylic acid mediated signaling pathway	4.23E-03
55	GO:0030150: protein import into mitochondrial matrix	4.23E-03
56	GO:0048278: vesicle docking	4.82E-03
57	GO:0009555: pollen development	5.19E-03
58	GO:0010150: leaf senescence	5.37E-03
59	GO:0009411: response to UV	5.45E-03
60	GO:0008360: regulation of cell shape	6.78E-03
61	GO:0010197: polar nucleus fusion	6.78E-03
62	GO:0055085: transmembrane transport	7.03E-03
63	GO:0061025: membrane fusion	7.13E-03
64	GO:0007275: multicellular organism development	7.71E-03
65	GO:0010193: response to ozone	7.85E-03
66	GO:0016032: viral process	8.22E-03
67	GO:0009630: gravitropism	8.22E-03
68	GO:0030163: protein catabolic process	8.59E-03
69	GO:0009860: pollen tube growth	8.94E-03
70	GO:0006464: cellular protein modification process	8.97E-03
71	GO:0009567: double fertilization forming a zygote and endosperm	8.97E-03
72	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.06E-02
73	GO:0009816: defense response to bacterium, incompatible interaction	1.06E-02
74	GO:0006906: vesicle fusion	1.10E-02
75	GO:0048767: root hair elongation	1.27E-02
76	GO:0006351: transcription, DNA-templated	1.27E-02
77	GO:0006979: response to oxidative stress	1.29E-02
78	GO:0010119: regulation of stomatal movement	1.36E-02
79	GO:0009867: jasmonic acid mediated signaling pathway	1.45E-02
80	GO:0016042: lipid catabolic process	1.48E-02
81	GO:0006099: tricarboxylic acid cycle	1.49E-02
82	GO:0006839: mitochondrial transport	1.59E-02
83	GO:0008152: metabolic process	1.68E-02
84	GO:0010114: response to red light	1.73E-02
85	GO:0000209: protein polyubiquitination	1.78E-02
86	GO:0009965: leaf morphogenesis	1.88E-02
87	GO:0009873: ethylene-activated signaling pathway	1.97E-02
88	GO:0031347: regulation of defense response	1.98E-02
89	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.98E-02
90	GO:0042538: hyperosmotic salinity response	2.04E-02
91	GO:0010224: response to UV-B	2.19E-02
92	GO:0006857: oligopeptide transport	2.25E-02
93	GO:0006096: glycolytic process	2.41E-02
94	GO:0009620: response to fungus	2.58E-02
95	GO:0018105: peptidyl-serine phosphorylation	2.81E-02
96	GO:0009790: embryo development	3.61E-02
97	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.40E-02
98	GO:0006470: protein dephosphorylation	4.47E-02
99	GO:0007166: cell surface receptor signaling pathway	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0016530: metallochaperone activity	0.00E+00
2	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	7.75E-05
3	GO:0047150: betaine-homocysteine S-methyltransferase activity	7.75E-05
4	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	1.85E-04
5	GO:0003994: aconitate hydratase activity	1.85E-04
6	GO:0000774: adenyl-nucleotide exchange factor activity	1.85E-04
7	GO:0032934: sterol binding	1.85E-04
8	GO:0000975: regulatory region DNA binding	3.11E-04
9	GO:0046527: glucosyltransferase activity	5.98E-04
10	GO:0004623: phospholipase A2 activity	7.57E-04
11	GO:0047714: galactolipase activity	9.24E-04
12	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.10E-03
13	GO:0008142: oxysterol binding	1.69E-03
14	GO:0003843: 1,3-beta-D-glucan synthase activity	1.69E-03
15	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.69E-03
16	GO:0030955: potassium ion binding	2.14E-03
17	GO:0004743: pyruvate kinase activity	2.14E-03
18	GO:0015198: oligopeptide transporter activity	2.86E-03
19	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.86E-03
20	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.86E-03
21	GO:0022857: transmembrane transporter activity	2.94E-03
22	GO:0005388: calcium-transporting ATPase activity	3.12E-03
23	GO:0008061: chitin binding	3.66E-03
24	GO:0051087: chaperone binding	4.52E-03
25	GO:0004707: MAP kinase activity	4.82E-03
26	GO:0003756: protein disulfide isomerase activity	5.77E-03
27	GO:0008194: UDP-glycosyltransferase activity	6.00E-03
28	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.59E-03
29	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	9.36E-03
30	GO:0043565: sequence-specific DNA binding	1.00E-02
31	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.14E-02
32	GO:0004806: triglyceride lipase activity	1.14E-02
33	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.19E-02
34	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.22E-02
35	GO:0042803: protein homodimerization activity	1.29E-02
36	GO:0004222: metalloendopeptidase activity	1.31E-02
37	GO:0000149: SNARE binding	1.54E-02
38	GO:0051539: 4 iron, 4 sulfur cluster binding	1.59E-02
39	GO:0005484: SNAP receptor activity	1.73E-02
40	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.14E-02
41	GO:0051082: unfolded protein binding	2.75E-02
42	GO:0015035: protein disulfide oxidoreductase activity	2.81E-02
43	GO:0016787: hydrolase activity	3.31E-02
44	GO:0005524: ATP binding	3.52E-02
45	GO:0005515: protein binding	3.64E-02
46	GO:0015144: carbohydrate transmembrane transporter activity	3.67E-02
47	GO:0005507: copper ion binding	3.85E-02
48	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.86E-02
49	GO:0015297: antiporter activity	3.93E-02
50	GO:0005351: sugar:proton symporter activity	3.99E-02
51	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0001405: presequence translocase-associated import motor	7.75E-05
2	GO:0005788: endoplasmic reticulum lumen	8.43E-04
3	GO:0016272: prefoldin complex	1.10E-03
4	GO:0016363: nuclear matrix	1.10E-03
5	GO:0031902: late endosome membrane	1.52E-03
6	GO:0000148: 1,3-beta-D-glucan synthase complex	1.69E-03
7	GO:0043231: intracellular membrane-bounded organelle	2.84E-03
8	GO:0009543: chloroplast thylakoid lumen	3.90E-03
9	GO:0005774: vacuolar membrane	5.09E-03
10	GO:0005783: endoplasmic reticulum	5.46E-03
11	GO:0016592: mediator complex	8.22E-03
12	GO:0005794: Golgi apparatus	1.28E-02
13	GO:0015934: large ribosomal subunit	1.36E-02
14	GO:0000325: plant-type vacuole	1.36E-02
15	GO:0031201: SNARE complex	1.64E-02
16	GO:0005789: endoplasmic reticulum membrane	2.17E-02
17	GO:0010008: endosome membrane	2.47E-02
18	GO:0016020: membrane	2.52E-02
19	GO:0009706: chloroplast inner membrane	2.75E-02
20	GO:0005759: mitochondrial matrix	3.80E-02
21	GO:0005802: trans-Golgi network	4.33E-02
22	GO:0005622: intracellular	4.79E-02
23	GO:0005768: endosome	4.91E-02