co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G40760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0000372: Group I intron splicing	0.00E+00
3	GO:0043972: histone H3-K23 acetylation	0.00E+00
4	GO:0080127: fruit septum development	0.00E+00
5	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
6	GO:0044154: histone H3-K14 acetylation	0.00E+00
7	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
8	GO:0000373: Group II intron splicing	2.67E-05
9	GO:0010582: floral meristem determinacy	7.26E-05
10	GO:0010158: abaxial cell fate specification	1.32E-04
11	GO:0043971: histone H3-K18 acetylation	3.73E-04
12	GO:0048657: anther wall tapetum cell differentiation	3.73E-04
13	GO:0010080: regulation of floral meristem growth	3.73E-04
14	GO:0042547: cell wall modification involved in multidimensional cell growth	3.73E-04
15	GO:0043087: regulation of GTPase activity	3.73E-04
16	GO:0043609: regulation of carbon utilization	3.73E-04
17	GO:0006436: tryptophanyl-tRNA aminoacylation	3.73E-04
18	GO:0000066: mitochondrial ornithine transport	3.73E-04
19	GO:0034757: negative regulation of iron ion transport	3.73E-04
20	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	3.73E-04
21	GO:0051171: regulation of nitrogen compound metabolic process	3.73E-04
22	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	3.73E-04
23	GO:0010583: response to cyclopentenone	6.39E-04
24	GO:0006435: threonyl-tRNA aminoacylation	8.10E-04
25	GO:0080005: photosystem stoichiometry adjustment	8.10E-04
26	GO:0010271: regulation of chlorophyll catabolic process	8.10E-04
27	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	8.10E-04
28	GO:0001736: establishment of planar polarity	8.10E-04
29	GO:0010024: phytochromobilin biosynthetic process	8.10E-04
30	GO:0045037: protein import into chloroplast stroma	1.11E-03
31	GO:0006094: gluconeogenesis	1.25E-03
32	GO:0006000: fructose metabolic process	1.31E-03
33	GO:0010022: meristem determinacy	1.31E-03
34	GO:0080117: secondary growth	1.31E-03
35	GO:0010540: basipetal auxin transport	1.41E-03
36	GO:0009800: cinnamic acid biosynthetic process	1.89E-03
37	GO:0010306: rhamnogalacturonan II biosynthetic process	1.89E-03
38	GO:0010255: glucose mediated signaling pathway	1.89E-03
39	GO:0051513: regulation of monopolar cell growth	1.89E-03
40	GO:0051639: actin filament network formation	1.89E-03
41	GO:0034059: response to anoxia	1.89E-03
42	GO:0009926: auxin polar transport	2.43E-03
43	GO:0015846: polyamine transport	2.54E-03
44	GO:0009956: radial pattern formation	2.54E-03
45	GO:0051781: positive regulation of cell division	2.54E-03
46	GO:0051764: actin crosslink formation	2.54E-03
47	GO:0010584: pollen exine formation	3.07E-03
48	GO:0080110: sporopollenin biosynthetic process	3.25E-03
49	GO:1902183: regulation of shoot apical meristem development	3.25E-03
50	GO:0009958: positive gravitropism	3.88E-03
51	GO:0048868: pollen tube development	3.88E-03
52	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.02E-03
53	GO:0006559: L-phenylalanine catabolic process	4.02E-03
54	GO:0048831: regulation of shoot system development	4.02E-03
55	GO:0003006: developmental process involved in reproduction	4.02E-03
56	GO:0048827: phyllome development	4.02E-03
57	GO:0009942: longitudinal axis specification	4.85E-03
58	GO:0048509: regulation of meristem development	4.85E-03
59	GO:0010019: chloroplast-nucleus signaling pathway	4.85E-03
60	GO:0048444: floral organ morphogenesis	4.85E-03
61	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	4.85E-03
62	GO:0009734: auxin-activated signaling pathway	5.62E-03
63	GO:0010050: vegetative phase change	5.73E-03
64	GO:0009610: response to symbiotic fungus	5.73E-03
65	GO:0006955: immune response	5.73E-03
66	GO:0080167: response to karrikin	6.45E-03
67	GO:0006353: DNA-templated transcription, termination	6.65E-03
68	GO:0009850: auxin metabolic process	6.65E-03
69	GO:0009704: de-etiolation	6.65E-03
70	GO:0000105: histidine biosynthetic process	6.65E-03
71	GO:0007155: cell adhesion	6.65E-03
72	GO:0048564: photosystem I assembly	6.65E-03
73	GO:0009911: positive regulation of flower development	6.94E-03
74	GO:0009657: plastid organization	7.64E-03
75	GO:0032544: plastid translation	7.64E-03
76	GO:0007389: pattern specification process	7.64E-03
77	GO:0044030: regulation of DNA methylation	7.64E-03
78	GO:0009932: cell tip growth	7.64E-03
79	GO:0006002: fructose 6-phosphate metabolic process	7.64E-03
80	GO:0022900: electron transport chain	7.64E-03
81	GO:0009827: plant-type cell wall modification	7.64E-03
82	GO:0010411: xyloglucan metabolic process	8.18E-03
83	GO:0006098: pentose-phosphate shunt	8.66E-03
84	GO:0048507: meristem development	8.66E-03
85	GO:0090305: nucleic acid phosphodiester bond hydrolysis	8.66E-03
86	GO:2000024: regulation of leaf development	8.66E-03
87	GO:0046916: cellular transition metal ion homeostasis	8.66E-03
88	GO:0000160: phosphorelay signal transduction system	9.54E-03
89	GO:0010380: regulation of chlorophyll biosynthetic process	9.74E-03
90	GO:0008202: steroid metabolic process	9.74E-03
91	GO:0019538: protein metabolic process	1.09E-02
92	GO:0006535: cysteine biosynthetic process from serine	1.09E-02
93	GO:0048829: root cap development	1.09E-02
94	GO:0045490: pectin catabolic process	1.12E-02
95	GO:0009750: response to fructose	1.20E-02
96	GO:0048765: root hair cell differentiation	1.20E-02
97	GO:0010229: inflorescence development	1.45E-02
98	GO:0030036: actin cytoskeleton organization	1.45E-02
99	GO:0042546: cell wall biogenesis	1.55E-02
100	GO:0010020: chloroplast fission	1.58E-02
101	GO:0009933: meristem structural organization	1.58E-02
102	GO:0010207: photosystem II assembly	1.58E-02
103	GO:0009934: regulation of meristem structural organization	1.58E-02
104	GO:0048467: gynoecium development	1.58E-02
105	GO:0009825: multidimensional cell growth	1.71E-02
106	GO:0080188: RNA-directed DNA methylation	1.71E-02
107	GO:0010053: root epidermal cell differentiation	1.71E-02
108	GO:0009793: embryo development ending in seed dormancy	1.97E-02
109	GO:0030150: protein import into mitochondrial matrix	1.99E-02
110	GO:0009944: polarity specification of adaxial/abaxial axis	1.99E-02
111	GO:0010187: negative regulation of seed germination	1.99E-02
112	GO:0051017: actin filament bundle assembly	1.99E-02
113	GO:0006289: nucleotide-excision repair	1.99E-02
114	GO:0019344: cysteine biosynthetic process	1.99E-02
115	GO:0009736: cytokinin-activated signaling pathway	2.01E-02
116	GO:0006418: tRNA aminoacylation for protein translation	2.14E-02
117	GO:0010073: meristem maintenance	2.14E-02
118	GO:0051302: regulation of cell division	2.14E-02
119	GO:0006417: regulation of translation	2.23E-02
120	GO:0003333: amino acid transmembrane transport	2.29E-02
121	GO:0016998: cell wall macromolecule catabolic process	2.29E-02
122	GO:0048511: rhythmic process	2.29E-02
123	GO:0006096: glycolytic process	2.38E-02
124	GO:0035428: hexose transmembrane transport	2.44E-02
125	GO:0009814: defense response, incompatible interaction	2.44E-02
126	GO:0016226: iron-sulfur cluster assembly	2.44E-02
127	GO:0048316: seed development	2.46E-02
128	GO:0071215: cellular response to abscisic acid stimulus	2.60E-02
129	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.67E-02
130	GO:0009740: gibberellic acid mediated signaling pathway	2.70E-02
131	GO:0009416: response to light stimulus	2.75E-02
132	GO:0006284: base-excision repair	2.76E-02
133	GO:0070417: cellular response to cold	2.92E-02
134	GO:0010087: phloem or xylem histogenesis	3.08E-02
135	GO:0045489: pectin biosynthetic process	3.25E-02
136	GO:0010154: fruit development	3.25E-02
137	GO:0010305: leaf vascular tissue pattern formation	3.25E-02
138	GO:0046323: glucose import	3.25E-02
139	GO:0010268: brassinosteroid homeostasis	3.25E-02
140	GO:0009733: response to auxin	3.41E-02
141	GO:0048825: cotyledon development	3.60E-02
142	GO:0009749: response to glucose	3.60E-02
143	GO:0002229: defense response to oomycetes	3.78E-02
144	GO:0016132: brassinosteroid biosynthetic process	3.78E-02
145	GO:0007264: small GTPase mediated signal transduction	3.96E-02
146	GO:0042744: hydrogen peroxide catabolic process	4.08E-02
147	GO:0010252: auxin homeostasis	4.33E-02
148	GO:0016125: sterol metabolic process	4.33E-02
149	GO:0006633: fatty acid biosynthetic process	4.49E-02
150	GO:0040008: regulation of growth	4.71E-02
151	GO:0001666: response to hypoxia	4.91E-02
152	GO:0016126: sterol biosynthetic process	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
2	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
3	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
4	GO:0019808: polyamine binding	0.00E+00
5	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
6	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
7	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
8	GO:0030570: pectate lyase activity	2.93E-04
9	GO:0005290: L-histidine transmembrane transporter activity	3.73E-04
10	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	3.73E-04
11	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	3.73E-04
12	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.73E-04
13	GO:0004830: tryptophan-tRNA ligase activity	3.73E-04
14	GO:0003879: ATP phosphoribosyltransferase activity	3.73E-04
15	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	3.73E-04
16	GO:0042834: peptidoglycan binding	3.73E-04
17	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	3.73E-04
18	GO:0008805: carbon-monoxide oxygenase activity	8.10E-04
19	GO:0000064: L-ornithine transmembrane transporter activity	8.10E-04
20	GO:0009884: cytokinin receptor activity	8.10E-04
21	GO:0004829: threonine-tRNA ligase activity	8.10E-04
22	GO:0050017: L-3-cyanoalanine synthase activity	8.10E-04
23	GO:0005094: Rho GDP-dissociation inhibitor activity	8.10E-04
24	GO:0004047: aminomethyltransferase activity	8.10E-04
25	GO:0045548: phenylalanine ammonia-lyase activity	1.31E-03
26	GO:0003913: DNA photolyase activity	1.31E-03
27	GO:0016805: dipeptidase activity	1.31E-03
28	GO:0005034: osmosensor activity	1.31E-03
29	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.31E-03
30	GO:0005096: GTPase activator activity	1.39E-03
31	GO:0015181: arginine transmembrane transporter activity	1.89E-03
32	GO:0015189: L-lysine transmembrane transporter activity	1.89E-03
33	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.89E-03
34	GO:0000254: C-4 methylsterol oxidase activity	1.89E-03
35	GO:0043424: protein histidine kinase binding	2.16E-03
36	GO:0010385: double-stranded methylated DNA binding	2.54E-03
37	GO:0070628: proteasome binding	2.54E-03
38	GO:0010011: auxin binding	2.54E-03
39	GO:0010328: auxin influx transmembrane transporter activity	2.54E-03
40	GO:0043621: protein self-association	2.69E-03
41	GO:0005471: ATP:ADP antiporter activity	3.25E-03
42	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.25E-03
43	GO:0008725: DNA-3-methyladenine glycosylase activity	3.25E-03
44	GO:0031593: polyubiquitin binding	4.02E-03
45	GO:2001070: starch binding	4.02E-03
46	GO:0004332: fructose-bisphosphate aldolase activity	4.02E-03
47	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.79E-03
48	GO:0019900: kinase binding	4.85E-03
49	GO:0004124: cysteine synthase activity	4.85E-03
50	GO:0004518: nuclease activity	5.12E-03
51	GO:0009881: photoreceptor activity	5.73E-03
52	GO:0019899: enzyme binding	5.73E-03
53	GO:0046914: transition metal ion binding	7.64E-03
54	GO:0008142: oxysterol binding	7.64E-03
55	GO:0016798: hydrolase activity, acting on glycosyl bonds	8.18E-03
56	GO:0016829: lyase activity	8.22E-03
57	GO:0009672: auxin:proton symporter activity	9.74E-03
58	GO:0004673: protein histidine kinase activity	1.09E-02
59	GO:0008327: methyl-CpG binding	1.20E-02
60	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.36E-02
61	GO:0010329: auxin efflux transmembrane transporter activity	1.45E-02
62	GO:0015266: protein channel activity	1.45E-02
63	GO:0000155: phosphorelay sensor kinase activity	1.45E-02
64	GO:0035091: phosphatidylinositol binding	1.61E-02
65	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.85E-02
66	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.85E-02
67	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.85E-02
68	GO:0043130: ubiquitin binding	1.99E-02
69	GO:0051087: chaperone binding	2.14E-02
70	GO:0004812: aminoacyl-tRNA ligase activity	2.92E-02
71	GO:0004402: histone acetyltransferase activity	3.08E-02
72	GO:0008536: Ran GTPase binding	3.25E-02
73	GO:0001085: RNA polymerase II transcription factor binding	3.25E-02
74	GO:0010181: FMN binding	3.42E-02
75	GO:0005355: glucose transmembrane transporter activity	3.42E-02
76	GO:0050662: coenzyme binding	3.42E-02
77	GO:0019843: rRNA binding	3.59E-02
78	GO:0019901: protein kinase binding	3.60E-02
79	GO:0000156: phosphorelay response regulator activity	4.14E-02
80	GO:0051015: actin filament binding	4.14E-02
81	GO:0003924: GTPase activity	4.15E-02
82	GO:0015144: carbohydrate transmembrane transporter activity	4.28E-02
83	GO:0008565: protein transporter activity	4.28E-02
84	GO:0003684: damaged DNA binding	4.33E-02
85	GO:0008237: metallopeptidase activity	4.52E-02
86	GO:0005200: structural constituent of cytoskeleton	4.52E-02
87	GO:0016413: O-acetyltransferase activity	4.71E-02
88	GO:0005351: sugar:proton symporter activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0009507: chloroplast	4.01E-06
4	GO:0009570: chloroplast stroma	2.65E-04
5	GO:0010370: perinucleolar chromocenter	3.73E-04
6	GO:0045254: pyruvate dehydrogenase complex	8.10E-04
7	GO:0032432: actin filament bundle	1.89E-03
8	GO:0009532: plastid stroma	2.37E-03
9	GO:0009986: cell surface	5.73E-03
10	GO:0031225: anchored component of membrane	5.90E-03
11	GO:0031305: integral component of mitochondrial inner membrane	6.65E-03
12	GO:0030529: intracellular ribonucleoprotein complex	6.94E-03
13	GO:0005720: nuclear heterochromatin	8.66E-03
14	GO:0005884: actin filament	1.20E-02
15	GO:0000311: plastid large ribosomal subunit	1.33E-02
16	GO:0016602: CCAAT-binding factor complex	1.45E-02
17	GO:0009574: preprophase band	1.45E-02
18	GO:0005578: proteinaceous extracellular matrix	1.45E-02
19	GO:0005856: cytoskeleton	1.68E-02
20	GO:0009535: chloroplast thylakoid membrane	1.84E-02
21	GO:0005886: plasma membrane	2.35E-02
22	GO:0005768: endosome	2.36E-02
23	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.76E-02
24	GO:0009706: chloroplast inner membrane	2.87E-02
25	GO:0005770: late endosome	3.25E-02
26	GO:0031965: nuclear membrane	3.60E-02
27	GO:0005623: cell	3.68E-02
28	GO:0009941: chloroplast envelope	3.81E-02
29	GO:0005759: mitochondrial matrix	4.49E-02