co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G40650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
2	GO:0006983: ER overload response	0.00E+00
3	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
4	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
5	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
6	GO:0005993: trehalose catabolic process	0.00E+00
7	GO:0046865: terpenoid transport	0.00E+00
8	GO:0050691: regulation of defense response to virus by host	2.04E-04
9	GO:0034975: protein folding in endoplasmic reticulum	2.04E-04
10	GO:0000077: DNA damage checkpoint	2.04E-04
11	GO:1990641: response to iron ion starvation	2.04E-04
12	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.04E-04
13	GO:0006101: citrate metabolic process	4.57E-04
14	GO:0043066: negative regulation of apoptotic process	4.57E-04
15	GO:0015012: heparan sulfate proteoglycan biosynthetic process	4.57E-04
16	GO:0080183: response to photooxidative stress	4.57E-04
17	GO:0010155: regulation of proton transport	4.57E-04
18	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.57E-04
19	GO:0006024: glycosaminoglycan biosynthetic process	4.57E-04
20	GO:0040020: regulation of meiotic nuclear division	4.57E-04
21	GO:0080168: abscisic acid transport	7.44E-04
22	GO:0006065: UDP-glucuronate biosynthetic process	7.44E-04
23	GO:0015783: GDP-fucose transport	7.44E-04
24	GO:0015692: lead ion transport	7.44E-04
25	GO:0052546: cell wall pectin metabolic process	7.44E-04
26	GO:0080163: regulation of protein serine/threonine phosphatase activity	7.44E-04
27	GO:0010731: protein glutathionylation	1.06E-03
28	GO:0071323: cellular response to chitin	1.06E-03
29	GO:0055070: copper ion homeostasis	1.06E-03
30	GO:0055089: fatty acid homeostasis	1.06E-03
31	GO:0051639: actin filament network formation	1.06E-03
32	GO:0009306: protein secretion	1.30E-03
33	GO:0051764: actin crosslink formation	1.41E-03
34	GO:0009738: abscisic acid-activated signaling pathway	1.68E-03
35	GO:0010200: response to chitin	1.77E-03
36	GO:0006097: glyoxylate cycle	1.80E-03
37	GO:0009229: thiamine diphosphate biosynthetic process	1.80E-03
38	GO:0006354: DNA-templated transcription, elongation	2.21E-03
39	GO:0009228: thiamine biosynthetic process	2.21E-03
40	GO:0045926: negative regulation of growth	2.66E-03
41	GO:0031930: mitochondria-nucleus signaling pathway	2.66E-03
42	GO:0015031: protein transport	2.75E-03
43	GO:0010044: response to aluminum ion	3.13E-03
44	GO:0046470: phosphatidylcholine metabolic process	3.13E-03
45	GO:2000014: regulation of endosperm development	3.13E-03
46	GO:0006906: vesicle fusion	3.22E-03
47	GO:0009850: auxin metabolic process	3.63E-03
48	GO:0031540: regulation of anthocyanin biosynthetic process	3.63E-03
49	GO:0006102: isocitrate metabolic process	3.63E-03
50	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.63E-03
51	GO:1900150: regulation of defense response to fungus	3.63E-03
52	GO:0010112: regulation of systemic acquired resistance	4.70E-03
53	GO:0006379: mRNA cleavage	4.70E-03
54	GO:0015780: nucleotide-sugar transport	4.70E-03
55	GO:0007338: single fertilization	4.70E-03
56	GO:0010332: response to gamma radiation	4.70E-03
57	GO:0045087: innate immune response	4.76E-03
58	GO:0008202: steroid metabolic process	5.27E-03
59	GO:0009086: methionine biosynthetic process	5.27E-03
60	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.27E-03
61	GO:0043069: negative regulation of programmed cell death	5.86E-03
62	GO:0019684: photosynthesis, light reaction	6.48E-03
63	GO:0009089: lysine biosynthetic process via diaminopimelate	6.48E-03
64	GO:0000038: very long-chain fatty acid metabolic process	6.48E-03
65	GO:0045037: protein import into chloroplast stroma	7.12E-03
66	GO:0009846: pollen germination	7.70E-03
67	GO:0030036: actin cytoskeleton organization	7.78E-03
68	GO:0018107: peptidyl-threonine phosphorylation	7.78E-03
69	GO:0007034: vacuolar transport	8.47E-03
70	GO:0002237: response to molecule of bacterial origin	8.47E-03
71	GO:0010224: response to UV-B	8.56E-03
72	GO:0046688: response to copper ion	9.17E-03
73	GO:0070588: calcium ion transmembrane transport	9.17E-03
74	GO:0007030: Golgi organization	9.17E-03
75	GO:0006636: unsaturated fatty acid biosynthetic process	9.90E-03
76	GO:0000162: tryptophan biosynthetic process	9.90E-03
77	GO:0080147: root hair cell development	1.06E-02
78	GO:0051017: actin filament bundle assembly	1.06E-02
79	GO:0006289: nucleotide-excision repair	1.06E-02
80	GO:0000027: ribosomal large subunit assembly	1.06E-02
81	GO:0045333: cellular respiration	1.06E-02
82	GO:0006825: copper ion transport	1.14E-02
83	GO:0018105: peptidyl-serine phosphorylation	1.22E-02
84	GO:0006334: nucleosome assembly	1.22E-02
85	GO:0009269: response to desiccation	1.22E-02
86	GO:0048278: vesicle docking	1.22E-02
87	GO:0071456: cellular response to hypoxia	1.30E-02
88	GO:0009751: response to salicylic acid	1.35E-02
89	GO:0009960: endosperm development	1.73E-02
90	GO:0061025: membrane fusion	1.82E-02
91	GO:0006623: protein targeting to vacuole	1.92E-02
92	GO:0007275: multicellular organism development	1.97E-02
93	GO:0071554: cell wall organization or biogenesis	2.01E-02
94	GO:0002229: defense response to oomycetes	2.01E-02
95	GO:0010193: response to ozone	2.01E-02
96	GO:0010150: leaf senescence	2.05E-02
97	GO:0032502: developmental process	2.11E-02
98	GO:0007264: small GTPase mediated signal transduction	2.11E-02
99	GO:0030163: protein catabolic process	2.21E-02
100	GO:0006464: cellular protein modification process	2.30E-02
101	GO:0009567: double fertilization forming a zygote and endosperm	2.30E-02
102	GO:0006470: protein dephosphorylation	2.34E-02
103	GO:0007166: cell surface receptor signaling pathway	2.34E-02
104	GO:0071805: potassium ion transmembrane transport	2.41E-02
105	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.72E-02
106	GO:0010029: regulation of seed germination	2.72E-02
107	GO:0009816: defense response to bacterium, incompatible interaction	2.72E-02
108	GO:0035556: intracellular signal transduction	3.02E-02
109	GO:0048767: root hair elongation	3.27E-02
110	GO:0006499: N-terminal protein myristoylation	3.38E-02
111	GO:0000724: double-strand break repair via homologous recombination	3.62E-02
112	GO:0009723: response to ethylene	3.66E-02
113	GO:0006099: tricarboxylic acid cycle	3.86E-02
114	GO:0046777: protein autophosphorylation	4.19E-02
115	GO:0006887: exocytosis	4.22E-02
116	GO:0006897: endocytosis	4.22E-02
117	GO:0006631: fatty acid metabolic process	4.22E-02
118	GO:0010114: response to red light	4.47E-02
119	GO:0051707: response to other organism	4.47E-02
120	GO:0000209: protein polyubiquitination	4.60E-02
121	GO:0008643: carbohydrate transport	4.73E-02
122	GO:0006855: drug transmembrane transport	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:0050334: thiaminase activity	0.00E+00
3	GO:0034338: short-chain carboxylesterase activity	0.00E+00
4	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
5	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
6	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
7	GO:0005212: structural constituent of eye lens	0.00E+00
8	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.04E-04
9	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.04E-04
10	GO:0015927: trehalase activity	2.04E-04
11	GO:0005509: calcium ion binding	3.84E-04
12	GO:0015036: disulfide oxidoreductase activity	4.57E-04
13	GO:0003994: aconitate hydratase activity	4.57E-04
14	GO:0032934: sterol binding	4.57E-04
15	GO:0005457: GDP-fucose transmembrane transporter activity	7.44E-04
16	GO:0003979: UDP-glucose 6-dehydrogenase activity	7.44E-04
17	GO:0004324: ferredoxin-NADP+ reductase activity	7.44E-04
18	GO:0016531: copper chaperone activity	7.44E-04
19	GO:0035529: NADH pyrophosphatase activity	1.06E-03
20	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.06E-03
21	GO:0009916: alternative oxidase activity	1.41E-03
22	GO:0004834: tryptophan synthase activity	1.41E-03
23	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.80E-03
24	GO:0004623: phospholipase A2 activity	1.80E-03
25	GO:0047631: ADP-ribose diphosphatase activity	1.80E-03
26	GO:0008641: small protein activating enzyme activity	1.80E-03
27	GO:0000210: NAD+ diphosphatase activity	2.21E-03
28	GO:0046872: metal ion binding	2.39E-03
29	GO:0004656: procollagen-proline 4-dioxygenase activity	2.66E-03
30	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.63E-03
31	GO:0008142: oxysterol binding	4.15E-03
32	GO:0004630: phospholipase D activity	4.15E-03
33	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.15E-03
34	GO:0000149: SNARE binding	5.20E-03
35	GO:0030234: enzyme regulator activity	5.86E-03
36	GO:0004864: protein phosphatase inhibitor activity	5.86E-03
37	GO:0005484: SNAP receptor activity	6.13E-03
38	GO:0015198: oligopeptide transporter activity	7.12E-03
39	GO:0051287: NAD binding	7.43E-03
40	GO:0005388: calcium-transporting ATPase activity	7.78E-03
41	GO:0008061: chitin binding	9.17E-03
42	GO:0003712: transcription cofactor activity	9.17E-03
43	GO:0031418: L-ascorbic acid binding	1.06E-02
44	GO:0022857: transmembrane transporter activity	1.11E-02
45	GO:0015079: potassium ion transmembrane transporter activity	1.14E-02
46	GO:0015035: protein disulfide oxidoreductase activity	1.22E-02
47	GO:0003756: protein disulfide isomerase activity	1.47E-02
48	GO:0005102: receptor binding	1.55E-02
49	GO:0030170: pyridoxal phosphate binding	1.64E-02
50	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.91E-02
51	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.21E-02
52	GO:0051015: actin filament binding	2.21E-02
53	GO:0008483: transaminase activity	2.41E-02
54	GO:0008237: metallopeptidase activity	2.41E-02
55	GO:0016413: O-acetyltransferase activity	2.51E-02
56	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.60E-02
57	GO:0008375: acetylglucosaminyltransferase activity	2.83E-02
58	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.83E-02
59	GO:0004683: calmodulin-dependent protein kinase activity	2.94E-02
60	GO:0004806: triglyceride lipase activity	2.94E-02
61	GO:0030247: polysaccharide binding	2.94E-02
62	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.16E-02
63	GO:0003682: chromatin binding	3.35E-02
64	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.55E-02
65	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.74E-02
66	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.98E-02
67	GO:0051539: 4 iron, 4 sulfur cluster binding	4.10E-02
68	GO:0051537: 2 iron, 2 sulfur cluster binding	4.73E-02
69	GO:0042803: protein homodimerization activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	2.29E-04
2	GO:0031314: extrinsic component of mitochondrial inner membrane	4.57E-04
3	GO:0032432: actin filament bundle	1.06E-03
4	GO:0030658: transport vesicle membrane	1.06E-03
5	GO:0005789: endoplasmic reticulum membrane	1.18E-03
6	GO:0009898: cytoplasmic side of plasma membrane	1.41E-03
7	GO:0000813: ESCRT I complex	1.80E-03
8	GO:0000164: protein phosphatase type 1 complex	1.80E-03
9	GO:0005783: endoplasmic reticulum	1.91E-03
10	GO:0030665: clathrin-coated vesicle membrane	5.27E-03
11	GO:0031201: SNARE complex	5.66E-03
12	GO:0017119: Golgi transport complex	5.86E-03
13	GO:0005884: actin filament	6.48E-03
14	GO:0005795: Golgi stack	9.17E-03
15	GO:0005758: mitochondrial intermembrane space	1.06E-02
16	GO:0070469: respiratory chain	1.14E-02
17	GO:0005743: mitochondrial inner membrane	1.25E-02
18	GO:0005794: Golgi apparatus	2.36E-02
19	GO:0000325: plant-type vacuole	3.50E-02
20	GO:0022625: cytosolic large ribosomal subunit	4.12E-02
21	GO:0031902: late endosome membrane	4.22E-02