Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G39730

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033494: ferulate metabolic process0.00E+00
2GO:0061635: regulation of protein complex stability0.00E+00
3GO:0006098: pentose-phosphate shunt4.55E-06
4GO:0006094: gluconeogenesis1.19E-05
5GO:0071277: cellular response to calcium ion1.48E-05
6GO:0080093: regulation of photorespiration1.48E-05
7GO:0031998: regulation of fatty acid beta-oxidation1.48E-05
8GO:0071457: cellular response to ozone3.88E-05
9GO:0055114: oxidation-reduction process5.76E-05
10GO:0071484: cellular response to light intensity1.05E-04
11GO:0071486: cellular response to high light intensity1.45E-04
12GO:0071493: cellular response to UV-B1.88E-04
13GO:0006097: glyoxylate cycle1.88E-04
14GO:0042549: photosystem II stabilization2.34E-04
15GO:0009854: oxidative photosynthetic carbon pathway2.82E-04
16GO:0009735: response to cytokinin3.24E-04
17GO:0006096: glycolytic process3.43E-04
18GO:0008610: lipid biosynthetic process3.84E-04
19GO:0009642: response to light intensity3.84E-04
20GO:0009704: de-etiolation3.84E-04
21GO:0071482: cellular response to light stimulus4.37E-04
22GO:0019430: removal of superoxide radicals4.37E-04
23GO:2000031: regulation of salicylic acid mediated signaling pathway4.37E-04
24GO:0090333: regulation of stomatal closure4.93E-04
25GO:0006783: heme biosynthetic process4.93E-04
26GO:0006779: porphyrin-containing compound biosynthetic process5.49E-04
27GO:0006782: protoporphyrinogen IX biosynthetic process6.08E-04
28GO:0009773: photosynthetic electron transport in photosystem I6.67E-04
29GO:0043085: positive regulation of catalytic activity6.67E-04
30GO:0002213: defense response to insect7.29E-04
31GO:0006108: malate metabolic process7.91E-04
32GO:0010143: cutin biosynthetic process8.55E-04
33GO:0010207: photosystem II assembly8.55E-04
34GO:0010025: wax biosynthetic process9.85E-04
35GO:0006636: unsaturated fatty acid biosynthetic process9.85E-04
36GO:0009695: jasmonic acid biosynthetic process1.12E-03
37GO:0009768: photosynthesis, light harvesting in photosystem I1.12E-03
38GO:2000022: regulation of jasmonic acid mediated signaling pathway1.26E-03
39GO:0042631: cellular response to water deprivation1.57E-03
40GO:0042335: cuticle development1.57E-03
41GO:0071472: cellular response to salt stress1.65E-03
42GO:0006662: glycerol ether metabolic process1.65E-03
43GO:0015986: ATP synthesis coupled proton transport1.73E-03
44GO:0010193: response to ozone1.89E-03
45GO:0051607: defense response to virus2.33E-03
46GO:0042128: nitrate assimilation2.61E-03
47GO:0015995: chlorophyll biosynthetic process2.70E-03
48GO:0018298: protein-chromophore linkage2.90E-03
49GO:0010218: response to far red light3.09E-03
50GO:0009853: photorespiration3.40E-03
51GO:0009637: response to blue light3.40E-03
52GO:0006099: tricarboxylic acid cycle3.50E-03
53GO:0034599: cellular response to oxidative stress3.50E-03
54GO:0006631: fatty acid metabolic process3.82E-03
55GO:0010114: response to red light4.04E-03
56GO:0006855: drug transmembrane transport4.49E-03
57GO:0010224: response to UV-B5.07E-03
58GO:0042742: defense response to bacterium6.66E-03
59GO:0006633: fatty acid biosynthetic process8.64E-03
60GO:0046686: response to cadmium ion1.04E-02
61GO:0009737: response to abscisic acid1.42E-02
62GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.50E-02
63GO:0015979: photosynthesis1.60E-02
64GO:0045454: cell redox homeostasis1.66E-02
65GO:0006869: lipid transport1.77E-02
66GO:0032259: methylation1.87E-02
67GO:0009416: response to light stimulus2.90E-02
68GO:0009611: response to wounding2.95E-02
69GO:0006979: response to oxidative stress4.82E-02
RankGO TermAdjusted P value
1GO:0008465: glycerate dehydrogenase activity0.00E+00
2GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
3GO:0004768: stearoyl-CoA 9-desaturase activity0.00E+00
4GO:0004332: fructose-bisphosphate aldolase activity9.67E-07
5GO:0008883: glutamyl-tRNA reductase activity3.88E-05
6GO:0050734: hydroxycinnamoyltransferase activity6.95E-05
7GO:0009011: starch synthase activity1.45E-04
8GO:0045300: acyl-[acyl-carrier-protein] desaturase activity1.88E-04
9GO:0004784: superoxide dismutase activity2.34E-04
10GO:0016615: malate dehydrogenase activity2.34E-04
11GO:0030060: L-malate dehydrogenase activity2.82E-04
12GO:0015078: hydrogen ion transmembrane transporter activity4.37E-04
13GO:0008047: enzyme activator activity6.08E-04
14GO:0008266: poly(U) RNA binding8.55E-04
15GO:0042626: ATPase activity, coupled to transmembrane movement of substances8.75E-04
16GO:0031409: pigment binding9.85E-04
17GO:0047134: protein-disulfide reductase activity1.49E-03
18GO:0004791: thioredoxin-disulfide reductase activity1.73E-03
19GO:0016853: isomerase activity1.73E-03
20GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.07E-03
21GO:0016168: chlorophyll binding2.52E-03
22GO:0050661: NADP binding3.71E-03
23GO:0016740: transferase activity4.03E-03
24GO:0051537: 2 iron, 2 sulfur cluster binding4.26E-03
25GO:0051287: NAD binding4.60E-03
26GO:0015035: protein disulfide oxidoreductase activity6.44E-03
27GO:0016491: oxidoreductase activity8.77E-03
28GO:0008168: methyltransferase activity1.22E-02
29GO:0016787: hydrolase activity1.43E-02
30GO:0005507: copper ion binding3.73E-02
RankGO TermAdjusted P value
1GO:0042579: microbody0.00E+00
2GO:0009507: chloroplast9.02E-14
3GO:0009534: chloroplast thylakoid8.86E-10
4GO:0009535: chloroplast thylakoid membrane3.49E-09
5GO:0009579: thylakoid3.91E-08
6GO:0009941: chloroplast envelope1.91E-05
7GO:0010287: plastoglobule1.97E-05
8GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)2.34E-04
9GO:0009570: chloroplast stroma3.43E-04
10GO:0005777: peroxisome4.33E-04
11GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)4.93E-04
12GO:0009543: chloroplast thylakoid lumen5.13E-04
13GO:0048046: apoplast7.63E-04
14GO:0030095: chloroplast photosystem II8.55E-04
15GO:0030076: light-harvesting complex9.19E-04
16GO:0043234: protein complex9.85E-04
17GO:0009522: photosystem I1.73E-03
18GO:0009523: photosystem II1.81E-03
19GO:0031977: thylakoid lumen3.82E-03
20GO:0005623: cell7.51E-03
21GO:0031969: chloroplast membrane1.46E-02
22GO:0016021: integral component of membrane2.26E-02
23GO:0022626: cytosolic ribosome2.81E-02
24GO:0005773: vacuole3.55E-02
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Gene type



Gene DE type