GO Enrichment Analysis of Co-expressed Genes with
AT2G39220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.09E-06 |
| 2 | GO:0030968: endoplasmic reticulum unfolded protein response | 5.18E-06 |
| 3 | GO:0044376: RNA polymerase II complex import to nucleus | 1.87E-05 |
| 4 | GO:0035266: meristem growth | 1.87E-05 |
| 5 | GO:0007292: female gamete generation | 1.87E-05 |
| 6 | GO:1990022: RNA polymerase III complex localization to nucleus | 1.87E-05 |
| 7 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.21E-05 |
| 8 | GO:0009790: embryo development | 4.35E-05 |
| 9 | GO:0034470: ncRNA processing | 4.85E-05 |
| 10 | GO:0042853: L-alanine catabolic process | 4.85E-05 |
| 11 | GO:0051788: response to misfolded protein | 4.85E-05 |
| 12 | GO:0060968: regulation of gene silencing | 8.61E-05 |
| 13 | GO:0072334: UDP-galactose transmembrane transport | 1.30E-04 |
| 14 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 1.30E-04 |
| 15 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.85E-04 |
| 16 | GO:0048827: phyllome development | 2.85E-04 |
| 17 | GO:0048232: male gamete generation | 2.85E-04 |
| 18 | GO:0043248: proteasome assembly | 2.85E-04 |
| 19 | GO:0006744: ubiquinone biosynthetic process | 4.02E-04 |
| 20 | GO:0000338: protein deneddylation | 4.02E-04 |
| 21 | GO:0010078: maintenance of root meristem identity | 4.64E-04 |
| 22 | GO:0010100: negative regulation of photomorphogenesis | 5.27E-04 |
| 23 | GO:0009058: biosynthetic process | 7.11E-04 |
| 24 | GO:0048829: root cap development | 7.30E-04 |
| 25 | GO:0010015: root morphogenesis | 8.02E-04 |
| 26 | GO:0006413: translational initiation | 8.59E-04 |
| 27 | GO:0000266: mitochondrial fission | 8.75E-04 |
| 28 | GO:0009933: meristem structural organization | 1.02E-03 |
| 29 | GO:0090351: seedling development | 1.10E-03 |
| 30 | GO:0008299: isoprenoid biosynthetic process | 1.35E-03 |
| 31 | GO:0009306: protein secretion | 1.70E-03 |
| 32 | GO:0046686: response to cadmium ion | 2.19E-03 |
| 33 | GO:0001666: response to hypoxia | 2.94E-03 |
| 34 | GO:0010311: lateral root formation | 3.63E-03 |
| 35 | GO:0006499: N-terminal protein myristoylation | 3.76E-03 |
| 36 | GO:0045087: innate immune response | 4.13E-03 |
| 37 | GO:0051301: cell division | 4.79E-03 |
| 38 | GO:0009640: photomorphogenesis | 4.91E-03 |
| 39 | GO:0000209: protein polyubiquitination | 5.04E-03 |
| 40 | GO:0008643: carbohydrate transport | 5.18E-03 |
| 41 | GO:0009965: leaf morphogenesis | 5.32E-03 |
| 42 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 5.60E-03 |
| 43 | GO:0006457: protein folding | 5.69E-03 |
| 44 | GO:0006486: protein glycosylation | 6.02E-03 |
| 45 | GO:0009585: red, far-red light phototransduction | 6.02E-03 |
| 46 | GO:0048367: shoot system development | 6.91E-03 |
| 47 | GO:0009553: embryo sac development | 7.53E-03 |
| 48 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.22E-02 |
| 49 | GO:0042254: ribosome biogenesis | 1.56E-02 |
| 50 | GO:0007049: cell cycle | 1.66E-02 |
| 51 | GO:0016192: vesicle-mediated transport | 1.85E-02 |
| 52 | GO:0007165: signal transduction | 1.86E-02 |
| 53 | GO:0009408: response to heat | 2.36E-02 |
| 54 | GO:0048364: root development | 2.43E-02 |
| 55 | GO:0050832: defense response to fungus | 2.66E-02 |
| 56 | GO:0009555: pollen development | 3.55E-02 |
| 57 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.42E-02 |
| 58 | GO:0006414: translational elongation | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990381: ubiquitin-specific protease binding | 1.87E-05 |
| 2 | GO:0019784: NEDD8-specific protease activity | 1.87E-05 |
| 3 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 1.87E-05 |
| 4 | GO:0051082: unfolded protein binding | 2.39E-05 |
| 5 | GO:0050347: trans-octaprenyltranstransferase activity | 4.85E-05 |
| 6 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 4.85E-05 |
| 7 | GO:0000030: mannosyltransferase activity | 8.61E-05 |
| 8 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.30E-04 |
| 9 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 1.30E-04 |
| 10 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 1.78E-04 |
| 11 | GO:0004659: prenyltransferase activity | 1.78E-04 |
| 12 | GO:0005459: UDP-galactose transmembrane transporter activity | 2.30E-04 |
| 13 | GO:0003924: GTPase activity | 2.51E-04 |
| 14 | GO:0036402: proteasome-activating ATPase activity | 2.85E-04 |
| 15 | GO:0004161: dimethylallyltranstransferase activity | 8.02E-04 |
| 16 | GO:0005388: calcium-transporting ATPase activity | 9.49E-04 |
| 17 | GO:0003743: translation initiation factor activity | 1.06E-03 |
| 18 | GO:0017025: TBP-class protein binding | 1.10E-03 |
| 19 | GO:0008514: organic anion transmembrane transporter activity | 1.70E-03 |
| 20 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.51E-03 |
| 21 | GO:0050897: cobalt ion binding | 3.88E-03 |
| 22 | GO:0003746: translation elongation factor activity | 4.13E-03 |
| 23 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.18E-03 |
| 24 | GO:0005525: GTP binding | 7.22E-03 |
| 25 | GO:0030170: pyridoxal phosphate binding | 9.68E-03 |
| 26 | GO:0008017: microtubule binding | 1.16E-02 |
| 27 | GO:0003729: mRNA binding | 1.33E-02 |
| 28 | GO:0005524: ATP binding | 1.74E-02 |
| 29 | GO:0009055: electron carrier activity | 2.48E-02 |
| 30 | GO:0016887: ATPase activity | 3.23E-02 |
| 31 | GO:0000166: nucleotide binding | 3.55E-02 |
| 32 | GO:0016740: transferase activity | 4.09E-02 |
| 33 | GO:0030246: carbohydrate binding | 4.39E-02 |
| 34 | GO:0005507: copper ion binding | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000836: Hrd1p ubiquitin ligase complex | 1.87E-05 |
| 2 | GO:0044322: endoplasmic reticulum quality control compartment | 1.87E-05 |
| 3 | GO:0005783: endoplasmic reticulum | 1.14E-04 |
| 4 | GO:0036513: Derlin-1 retrotranslocation complex | 1.30E-04 |
| 5 | GO:0031597: cytosolic proteasome complex | 3.42E-04 |
| 6 | GO:0030173: integral component of Golgi membrane | 3.42E-04 |
| 7 | GO:0031595: nuclear proteasome complex | 4.02E-04 |
| 8 | GO:0008180: COP9 signalosome | 5.93E-04 |
| 9 | GO:0005886: plasma membrane | 6.34E-04 |
| 10 | GO:0008540: proteasome regulatory particle, base subcomplex | 6.61E-04 |
| 11 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.10E-03 |
| 12 | GO:0043234: protein complex | 1.18E-03 |
| 13 | GO:0005874: microtubule | 1.65E-03 |
| 14 | GO:0030529: intracellular ribonucleoprotein complex | 2.94E-03 |
| 15 | GO:0005788: endoplasmic reticulum lumen | 3.05E-03 |
| 16 | GO:0000502: proteasome complex | 6.02E-03 |
| 17 | GO:0005774: vacuolar membrane | 6.02E-03 |
| 18 | GO:0005834: heterotrimeric G-protein complex | 7.07E-03 |
| 19 | GO:0005654: nucleoplasm | 8.83E-03 |
| 20 | GO:0016021: integral component of membrane | 9.13E-03 |
| 21 | GO:0009524: phragmoplast | 9.33E-03 |
| 22 | GO:0005739: mitochondrion | 1.24E-02 |
| 23 | GO:0005794: Golgi apparatus | 1.33E-02 |
| 24 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.64E-02 |
| 25 | GO:0043231: intracellular membrane-bounded organelle | 2.53E-02 |
| 26 | GO:0009506: plasmodesma | 3.28E-02 |
| 27 | GO:0005618: cell wall | 3.54E-02 |
| 28 | GO:0005773: vacuole | 4.73E-02 |
| 29 | GO:0005802: trans-Golgi network | 4.97E-02 |