Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G39180

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044154: histone H3-K14 acetylation0.00E+00
2GO:1901698: response to nitrogen compound0.00E+00
3GO:0046460: neutral lipid biosynthetic process0.00E+00
4GO:0043972: histone H3-K23 acetylation0.00E+00
5GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process6.58E-05
6GO:0043971: histone H3-K18 acetylation6.58E-05
7GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation1.59E-04
8GO:0071705: nitrogen compound transport2.69E-04
9GO:0048868: pollen tube development3.70E-04
10GO:0009800: cinnamic acid biosynthetic process3.90E-04
11GO:0010306: rhamnogalacturonan II biosynthetic process3.90E-04
12GO:0071249: cellular response to nitrate5.20E-04
13GO:0015846: polyamine transport5.20E-04
14GO:0031365: N-terminal protein amino acid modification6.60E-04
15GO:0006559: L-phenylalanine catabolic process8.06E-04
16GO:0030244: cellulose biosynthetic process8.40E-04
17GO:0034389: lipid particle organization9.59E-04
18GO:0009610: response to symbiotic fungus1.12E-03
19GO:0006353: DNA-templated transcription, termination1.29E-03
20GO:0009827: plant-type cell wall modification1.47E-03
21GO:0044030: regulation of DNA methylation1.47E-03
22GO:0019432: triglyceride biosynthetic process1.65E-03
23GO:0008202: steroid metabolic process1.85E-03
24GO:0015706: nitrate transport2.48E-03
25GO:0080188: RNA-directed DNA methylation3.16E-03
26GO:0010167: response to nitrate3.16E-03
27GO:0006071: glycerol metabolic process3.40E-03
28GO:0006863: purine nucleobase transport3.40E-03
29GO:0009833: plant-type primary cell wall biogenesis3.40E-03
30GO:0043622: cortical microtubule organization3.90E-03
31GO:0016226: iron-sulfur cluster assembly4.43E-03
32GO:0009451: RNA modification4.44E-03
33GO:0045489: pectin biosynthetic process5.85E-03
34GO:0007264: small GTPase mediated signal transduction7.08E-03
35GO:0010583: response to cyclopentenone7.08E-03
36GO:0016126: sterol biosynthetic process8.74E-03
37GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.08E-03
38GO:0016049: cell growth1.02E-02
39GO:0009832: plant-type cell wall biogenesis1.09E-02
40GO:0009834: plant-type secondary cell wall biogenesis1.13E-02
41GO:0007568: aging1.17E-02
42GO:0006629: lipid metabolic process1.23E-02
43GO:0008152: metabolic process1.35E-02
44GO:0051603: proteolysis involved in cellular protein catabolic process1.88E-02
45GO:0009553: embryo sac development2.31E-02
46GO:0009790: embryo development3.09E-02
47GO:0006633: fatty acid biosynthetic process3.26E-02
48GO:0006508: proteolysis3.96E-02
49GO:0071555: cell wall organization4.41E-02
RankGO TermAdjusted P value
1GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity0.00E+00
2GO:0019808: polyamine binding0.00E+00
3GO:0047807: cytokinin 7-beta-glucosyltransferase activity6.58E-05
4GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity6.58E-05
5GO:0080062: cytokinin 9-beta-glucosyltransferase activity6.58E-05
6GO:0004047: aminomethyltransferase activity1.59E-04
7GO:0045548: phenylalanine ammonia-lyase activity2.69E-04
8GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity2.69E-04
9GO:0000254: C-4 methylsterol oxidase activity3.90E-04
10GO:0010385: double-stranded methylated DNA binding5.20E-04
11GO:0004144: diacylglycerol O-acyltransferase activity9.59E-04
12GO:0008235: metalloexopeptidase activity1.12E-03
13GO:0019899: enzyme binding1.12E-03
14GO:0008142: oxysterol binding1.47E-03
15GO:0008271: secondary active sulfate transmembrane transporter activity1.47E-03
16GO:0015020: glucuronosyltransferase activity2.05E-03
17GO:0008327: methyl-CpG binding2.26E-03
18GO:0004177: aminopeptidase activity2.26E-03
19GO:0080044: quercetin 7-O-glucosyltransferase activity2.31E-03
20GO:0080043: quercetin 3-O-glucosyltransferase activity2.31E-03
21GO:0015116: sulfate transmembrane transporter activity2.48E-03
22GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.93E-03
23GO:0005345: purine nucleobase transmembrane transporter activity3.90E-03
24GO:0004176: ATP-dependent peptidase activity4.17E-03
25GO:0016760: cellulose synthase (UDP-forming) activity4.70E-03
26GO:0008194: UDP-glycosyltransferase activity4.85E-03
27GO:0004402: histone acetyltransferase activity5.55E-03
28GO:0004518: nuclease activity7.08E-03
29GO:0016759: cellulose synthase activity7.73E-03
30GO:0016413: O-acetyltransferase activity8.40E-03
31GO:0004806: triglyceride lipase activity9.79E-03
32GO:0004519: endonuclease activity1.34E-02
33GO:0042393: histone binding1.36E-02
34GO:0004185: serine-type carboxypeptidase activity1.49E-02
35GO:0043621: protein self-association1.57E-02
36GO:0035091: phosphatidylinositol binding1.57E-02
37GO:0015293: symporter activity1.62E-02
38GO:0016298: lipase activity1.88E-02
39GO:0016758: transferase activity, transferring hexosyl groups2.72E-02
40GO:0019843: rRNA binding2.77E-02
41GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.88E-02
42GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.13E-02
43GO:0016757: transferase activity, transferring glycosyl groups4.48E-02
44GO:0046982: protein heterodimerization activity4.69E-02
RankGO TermAdjusted P value
1GO:0042597: periplasmic space0.00E+00
2GO:0010370: perinucleolar chromocenter6.58E-05
3GO:0010330: cellulose synthase complex2.69E-04
4GO:0010005: cortical microtubule, transverse to long axis9.59E-04
5GO:0005811: lipid particle1.47E-03
6GO:0005720: nuclear heterochromatin1.65E-03
7GO:0016602: CCAAT-binding factor complex2.70E-03
8GO:0005802: trans-Golgi network7.18E-03
9GO:0005622: intracellular8.19E-03
10GO:0005768: endosome8.45E-03
11GO:0009505: plant-type cell wall1.29E-02
12GO:0043231: intracellular membrane-bounded organelle1.35E-02
13GO:0005887: integral component of plasma membrane1.67E-02
14GO:0009507: chloroplast1.93E-02
15GO:0031225: anchored component of membrane3.41E-02
16GO:0005615: extracellular space3.78E-02
17GO:0046658: anchored component of plasma membrane4.26E-02
<
Gene type



Gene DE type