GO Enrichment Analysis of Co-expressed Genes with
AT2G39030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006216: cytidine catabolic process | 0.00E+00 |
| 2 | GO:0090400: stress-induced premature senescence | 0.00E+00 |
| 3 | GO:1904250: positive regulation of age-related resistance | 0.00E+00 |
| 4 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 5 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 6 | GO:0072722: response to amitrole | 0.00E+00 |
| 7 | GO:0009407: toxin catabolic process | 9.87E-08 |
| 8 | GO:0046686: response to cadmium ion | 1.30E-06 |
| 9 | GO:0009636: response to toxic substance | 1.31E-05 |
| 10 | GO:0006564: L-serine biosynthetic process | 1.32E-05 |
| 11 | GO:0055114: oxidation-reduction process | 2.43E-05 |
| 12 | GO:0043068: positive regulation of programmed cell death | 5.09E-05 |
| 13 | GO:0042964: thioredoxin reduction | 9.33E-05 |
| 14 | GO:0006680: glucosylceramide catabolic process | 9.33E-05 |
| 15 | GO:0010150: leaf senescence | 1.06E-04 |
| 16 | GO:0006099: tricarboxylic acid cycle | 1.49E-04 |
| 17 | GO:0006979: response to oxidative stress | 1.84E-04 |
| 18 | GO:1902000: homogentisate catabolic process | 2.20E-04 |
| 19 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.20E-04 |
| 20 | GO:0015709: thiosulfate transport | 2.20E-04 |
| 21 | GO:0071422: succinate transmembrane transport | 2.20E-04 |
| 22 | GO:0000162: tryptophan biosynthetic process | 2.63E-04 |
| 23 | GO:0006874: cellular calcium ion homeostasis | 3.24E-04 |
| 24 | GO:0016998: cell wall macromolecule catabolic process | 3.56E-04 |
| 25 | GO:0010272: response to silver ion | 3.67E-04 |
| 26 | GO:0009072: aromatic amino acid family metabolic process | 3.67E-04 |
| 27 | GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity | 3.67E-04 |
| 28 | GO:0045454: cell redox homeostasis | 4.26E-04 |
| 29 | GO:0015729: oxaloacetate transport | 5.28E-04 |
| 30 | GO:0009851: auxin biosynthetic process | 6.66E-04 |
| 31 | GO:0045227: capsule polysaccharide biosynthetic process | 7.02E-04 |
| 32 | GO:0033358: UDP-L-arabinose biosynthetic process | 7.02E-04 |
| 33 | GO:0010188: response to microbial phytotoxin | 7.02E-04 |
| 34 | GO:0006878: cellular copper ion homeostasis | 7.02E-04 |
| 35 | GO:0071423: malate transmembrane transport | 8.88E-04 |
| 36 | GO:0046283: anthocyanin-containing compound metabolic process | 8.88E-04 |
| 37 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.08E-03 |
| 38 | GO:0009228: thiamine biosynthetic process | 1.08E-03 |
| 39 | GO:0035435: phosphate ion transmembrane transport | 1.08E-03 |
| 40 | GO:0002238: response to molecule of fungal origin | 1.08E-03 |
| 41 | GO:0009972: cytidine deamination | 1.08E-03 |
| 42 | GO:0009082: branched-chain amino acid biosynthetic process | 1.29E-03 |
| 43 | GO:0009099: valine biosynthetic process | 1.29E-03 |
| 44 | GO:0009554: megasporogenesis | 1.29E-03 |
| 45 | GO:0010043: response to zinc ion | 1.50E-03 |
| 46 | GO:0071669: plant-type cell wall organization or biogenesis | 1.51E-03 |
| 47 | GO:0008272: sulfate transport | 1.51E-03 |
| 48 | GO:0050829: defense response to Gram-negative bacterium | 1.51E-03 |
| 49 | GO:1900057: positive regulation of leaf senescence | 1.51E-03 |
| 50 | GO:1902074: response to salt | 1.51E-03 |
| 51 | GO:0006102: isocitrate metabolic process | 1.75E-03 |
| 52 | GO:0022900: electron transport chain | 2.00E-03 |
| 53 | GO:0015996: chlorophyll catabolic process | 2.00E-03 |
| 54 | GO:0007186: G-protein coupled receptor signaling pathway | 2.00E-03 |
| 55 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.00E-03 |
| 56 | GO:0019430: removal of superoxide radicals | 2.00E-03 |
| 57 | GO:0009097: isoleucine biosynthetic process | 2.00E-03 |
| 58 | GO:0009651: response to salt stress | 2.13E-03 |
| 59 | GO:0051865: protein autoubiquitination | 2.25E-03 |
| 60 | GO:0010112: regulation of systemic acquired resistance | 2.25E-03 |
| 61 | GO:0009098: leucine biosynthetic process | 2.52E-03 |
| 62 | GO:2000280: regulation of root development | 2.52E-03 |
| 63 | GO:0006032: chitin catabolic process | 2.80E-03 |
| 64 | GO:0009688: abscisic acid biosynthetic process | 2.80E-03 |
| 65 | GO:0052544: defense response by callose deposition in cell wall | 3.09E-03 |
| 66 | GO:0000272: polysaccharide catabolic process | 3.09E-03 |
| 67 | GO:0012501: programmed cell death | 3.38E-03 |
| 68 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 3.38E-03 |
| 69 | GO:0006807: nitrogen compound metabolic process | 3.69E-03 |
| 70 | GO:0018107: peptidyl-threonine phosphorylation | 3.69E-03 |
| 71 | GO:0055046: microgametogenesis | 3.69E-03 |
| 72 | GO:0009225: nucleotide-sugar metabolic process | 4.33E-03 |
| 73 | GO:0009409: response to cold | 6.40E-03 |
| 74 | GO:0006012: galactose metabolic process | 6.47E-03 |
| 75 | GO:0009561: megagametogenesis | 6.85E-03 |
| 76 | GO:0042147: retrograde transport, endosome to Golgi | 7.25E-03 |
| 77 | GO:0042631: cellular response to water deprivation | 7.65E-03 |
| 78 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 7.69E-03 |
| 79 | GO:0045489: pectin biosynthetic process | 8.06E-03 |
| 80 | GO:0006662: glycerol ether metabolic process | 8.06E-03 |
| 81 | GO:0009617: response to bacterium | 8.21E-03 |
| 82 | GO:0006814: sodium ion transport | 8.47E-03 |
| 83 | GO:0010183: pollen tube guidance | 8.90E-03 |
| 84 | GO:0006891: intra-Golgi vesicle-mediated transport | 9.33E-03 |
| 85 | GO:0009630: gravitropism | 9.78E-03 |
| 86 | GO:1901657: glycosyl compound metabolic process | 1.02E-02 |
| 87 | GO:0009567: double fertilization forming a zygote and endosperm | 1.07E-02 |
| 88 | GO:0006464: cellular protein modification process | 1.07E-02 |
| 89 | GO:0009615: response to virus | 1.21E-02 |
| 90 | GO:0010029: regulation of seed germination | 1.26E-02 |
| 91 | GO:0009627: systemic acquired resistance | 1.31E-02 |
| 92 | GO:0006974: cellular response to DNA damage stimulus | 1.31E-02 |
| 93 | GO:0016049: cell growth | 1.41E-02 |
| 94 | GO:0009817: defense response to fungus, incompatible interaction | 1.46E-02 |
| 95 | GO:0048527: lateral root development | 1.62E-02 |
| 96 | GO:0034599: cellular response to oxidative stress | 1.78E-02 |
| 97 | GO:0006839: mitochondrial transport | 1.89E-02 |
| 98 | GO:0042542: response to hydrogen peroxide | 2.01E-02 |
| 99 | GO:0000209: protein polyubiquitination | 2.13E-02 |
| 100 | GO:0008152: metabolic process | 2.16E-02 |
| 101 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.37E-02 |
| 102 | GO:0009846: pollen germination | 2.43E-02 |
| 103 | GO:0006812: cation transport | 2.43E-02 |
| 104 | GO:0009664: plant-type cell wall organization | 2.43E-02 |
| 105 | GO:0006813: potassium ion transport | 2.55E-02 |
| 106 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.62E-02 |
| 107 | GO:0048316: seed development | 2.94E-02 |
| 108 | GO:0009620: response to fungus | 3.08E-02 |
| 109 | GO:0009735: response to cytokinin | 3.18E-02 |
| 110 | GO:0042545: cell wall modification | 3.21E-02 |
| 111 | GO:0018105: peptidyl-serine phosphorylation | 3.35E-02 |
| 112 | GO:0051726: regulation of cell cycle | 3.42E-02 |
| 113 | GO:0009416: response to light stimulus | 3.47E-02 |
| 114 | GO:0009058: biosynthetic process | 4.00E-02 |
| 115 | GO:0042744: hydrogen peroxide catabolic process | 4.22E-02 |
| 116 | GO:0045490: pectin catabolic process | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051766: inositol trisphosphate kinase activity | 0.00E+00 |
| 2 | GO:0070401: NADP+ binding | 0.00E+00 |
| 3 | GO:0047844: deoxycytidine deaminase activity | 0.00E+00 |
| 4 | GO:0051765: inositol tetrakisphosphate kinase activity | 0.00E+00 |
| 5 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 6 | GO:0016229: steroid dehydrogenase activity | 0.00E+00 |
| 7 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 8 | GO:0004364: glutathione transferase activity | 2.62E-07 |
| 9 | GO:0004601: peroxidase activity | 2.00E-05 |
| 10 | GO:0043295: glutathione binding | 3.89E-05 |
| 11 | GO:0004033: aldo-keto reductase (NADP) activity | 5.09E-05 |
| 12 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 9.33E-05 |
| 13 | GO:0010179: IAA-Ala conjugate hydrolase activity | 9.33E-05 |
| 14 | GO:2001227: quercitrin binding | 9.33E-05 |
| 15 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 9.33E-05 |
| 16 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 9.33E-05 |
| 17 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 9.33E-05 |
| 18 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 9.33E-05 |
| 19 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 9.33E-05 |
| 20 | GO:0048037: cofactor binding | 9.33E-05 |
| 21 | GO:0004348: glucosylceramidase activity | 9.33E-05 |
| 22 | GO:2001147: camalexin binding | 9.33E-05 |
| 23 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 9.33E-05 |
| 24 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 9.33E-05 |
| 25 | GO:0004649: poly(ADP-ribose) glycohydrolase activity | 9.33E-05 |
| 26 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.20E-04 |
| 27 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.20E-04 |
| 28 | GO:0015117: thiosulfate transmembrane transporter activity | 2.20E-04 |
| 29 | GO:0019172: glyoxalase III activity | 2.20E-04 |
| 30 | GO:1901677: phosphate transmembrane transporter activity | 2.20E-04 |
| 31 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.20E-04 |
| 32 | GO:0005217: intracellular ligand-gated ion channel activity | 2.34E-04 |
| 33 | GO:0004970: ionotropic glutamate receptor activity | 2.34E-04 |
| 34 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 3.67E-04 |
| 35 | GO:0015141: succinate transmembrane transporter activity | 3.67E-04 |
| 36 | GO:0015035: protein disulfide oxidoreductase activity | 4.91E-04 |
| 37 | GO:0052655: L-valine transaminase activity | 5.28E-04 |
| 38 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 5.28E-04 |
| 39 | GO:0005432: calcium:sodium antiporter activity | 5.28E-04 |
| 40 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 5.28E-04 |
| 41 | GO:0015131: oxaloacetate transmembrane transporter activity | 5.28E-04 |
| 42 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 5.28E-04 |
| 43 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 5.28E-04 |
| 44 | GO:0052656: L-isoleucine transaminase activity | 5.28E-04 |
| 45 | GO:0052654: L-leucine transaminase activity | 5.28E-04 |
| 46 | GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity | 5.28E-04 |
| 47 | GO:0017077: oxidative phosphorylation uncoupler activity | 5.28E-04 |
| 48 | GO:0004791: thioredoxin-disulfide reductase activity | 6.22E-04 |
| 49 | GO:0004084: branched-chain-amino-acid transaminase activity | 7.02E-04 |
| 50 | GO:0004930: G-protein coupled receptor activity | 7.02E-04 |
| 51 | GO:0004031: aldehyde oxidase activity | 7.02E-04 |
| 52 | GO:0050302: indole-3-acetaldehyde oxidase activity | 7.02E-04 |
| 53 | GO:0050373: UDP-arabinose 4-epimerase activity | 7.02E-04 |
| 54 | GO:0004834: tryptophan synthase activity | 7.02E-04 |
| 55 | GO:0008237: metallopeptidase activity | 9.05E-04 |
| 56 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.08E-03 |
| 57 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.08E-03 |
| 58 | GO:0035252: UDP-xylosyltransferase activity | 1.08E-03 |
| 59 | GO:0051920: peroxiredoxin activity | 1.29E-03 |
| 60 | GO:0004126: cytidine deaminase activity | 1.29E-03 |
| 61 | GO:0003978: UDP-glucose 4-epimerase activity | 1.29E-03 |
| 62 | GO:0004602: glutathione peroxidase activity | 1.29E-03 |
| 63 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.51E-03 |
| 64 | GO:0015140: malate transmembrane transporter activity | 1.51E-03 |
| 65 | GO:0016209: antioxidant activity | 1.75E-03 |
| 66 | GO:0015491: cation:cation antiporter activity | 1.75E-03 |
| 67 | GO:0004568: chitinase activity | 2.80E-03 |
| 68 | GO:0008794: arsenate reductase (glutaredoxin) activity | 3.09E-03 |
| 69 | GO:0015116: sulfate transmembrane transporter activity | 3.38E-03 |
| 70 | GO:0008061: chitin binding | 4.33E-03 |
| 71 | GO:0003824: catalytic activity | 4.66E-03 |
| 72 | GO:0015297: antiporter activity | 6.56E-03 |
| 73 | GO:0047134: protein-disulfide reductase activity | 7.25E-03 |
| 74 | GO:0001085: RNA polymerase II transcription factor binding | 8.06E-03 |
| 75 | GO:0005199: structural constituent of cell wall | 8.06E-03 |
| 76 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.02E-02 |
| 77 | GO:0005507: copper ion binding | 1.12E-02 |
| 78 | GO:0016597: amino acid binding | 1.16E-02 |
| 79 | GO:0050660: flavin adenine dinucleotide binding | 1.23E-02 |
| 80 | GO:0102483: scopolin beta-glucosidase activity | 1.36E-02 |
| 81 | GO:0061630: ubiquitin protein ligase activity | 1.39E-02 |
| 82 | GO:0030145: manganese ion binding | 1.62E-02 |
| 83 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.62E-02 |
| 84 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.62E-02 |
| 85 | GO:0042803: protein homodimerization activity | 1.66E-02 |
| 86 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.73E-02 |
| 87 | GO:0008422: beta-glucosidase activity | 1.84E-02 |
| 88 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.84E-02 |
| 89 | GO:0009055: electron carrier activity | 2.10E-02 |
| 90 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.18E-02 |
| 91 | GO:0051287: NAD binding | 2.37E-02 |
| 92 | GO:0016298: lipase activity | 2.62E-02 |
| 93 | GO:0045330: aspartyl esterase activity | 2.75E-02 |
| 94 | GO:0045735: nutrient reservoir activity | 2.88E-02 |
| 95 | GO:0016887: ATPase activity | 3.03E-02 |
| 96 | GO:0030599: pectinesterase activity | 3.15E-02 |
| 97 | GO:0016746: transferase activity, transferring acyl groups | 3.35E-02 |
| 98 | GO:0030170: pyridoxal phosphate binding | 4.15E-02 |
| 99 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.22E-02 |
| 100 | GO:0046910: pectinesterase inhibitor activity | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045252: oxoglutarate dehydrogenase complex | 9.33E-05 |
| 2 | GO:0009530: primary cell wall | 3.67E-04 |
| 3 | GO:0005829: cytosol | 4.51E-04 |
| 4 | GO:0005788: endoplasmic reticulum lumen | 1.07E-03 |
| 5 | GO:0009570: chloroplast stroma | 2.54E-03 |
| 6 | GO:0005750: mitochondrial respiratory chain complex III | 4.01E-03 |
| 7 | GO:0005886: plasma membrane | 8.75E-03 |
| 8 | GO:0071944: cell periphery | 1.02E-02 |
| 9 | GO:0032580: Golgi cisterna membrane | 1.07E-02 |
| 10 | GO:0005667: transcription factor complex | 1.31E-02 |
| 11 | GO:0005737: cytoplasm | 1.32E-02 |
| 12 | GO:0009507: chloroplast | 1.90E-02 |
| 13 | GO:0090406: pollen tube | 2.07E-02 |
| 14 | GO:0005794: Golgi apparatus | 2.17E-02 |
| 15 | GO:0009505: plant-type cell wall | 2.32E-02 |
| 16 | GO:0005783: endoplasmic reticulum | 2.63E-02 |
| 17 | GO:0048046: apoplast | 2.82E-02 |
| 18 | GO:0009506: plasmodesma | 3.02E-02 |
| 19 | GO:0005759: mitochondrial matrix | 4.53E-02 |
| 20 | GO:0005773: vacuole | 4.86E-02 |