Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G38960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2001142: nicotinate transport0.00E+00
2GO:2001143: N-methylnicotinate transport0.00E+00
3GO:0070212: protein poly-ADP-ribosylation0.00E+00
4GO:0006468: protein phosphorylation1.25E-08
5GO:0000187: activation of MAPK activity3.15E-06
6GO:0009626: plant-type hypersensitive response1.95E-05
7GO:2000037: regulation of stomatal complex patterning2.20E-05
8GO:0019673: GDP-mannose metabolic process7.90E-05
9GO:0051180: vitamin transport7.90E-05
10GO:0030974: thiamine pyrophosphate transport7.90E-05
11GO:0048482: plant ovule morphogenesis7.90E-05
12GO:0010365: positive regulation of ethylene biosynthetic process7.90E-05
13GO:0051245: negative regulation of cellular defense response7.90E-05
14GO:0043069: negative regulation of programmed cell death9.11E-05
15GO:0010229: inflorescence development1.45E-04
16GO:0002237: response to molecule of bacterial origin1.65E-04
17GO:0007584: response to nutrient1.89E-04
18GO:0015893: drug transport1.89E-04
19GO:0002221: pattern recognition receptor signaling pathway1.89E-04
20GO:0009814: defense response, incompatible interaction3.14E-04
21GO:0010581: regulation of starch biosynthetic process3.17E-04
22GO:0002230: positive regulation of defense response to virus by host3.17E-04
23GO:0042351: 'de novo' GDP-L-fucose biosynthetic process3.17E-04
24GO:0051176: positive regulation of sulfur metabolic process3.17E-04
25GO:0046621: negative regulation of organ growth3.17E-04
26GO:0010227: floral organ abscission3.42E-04
27GO:0009751: response to salicylic acid4.09E-04
28GO:0042823: pyridoxal phosphate biosynthetic process4.58E-04
29GO:0006612: protein targeting to membrane4.58E-04
30GO:0015696: ammonium transport4.58E-04
31GO:0010107: potassium ion import6.09E-04
32GO:2000038: regulation of stomatal complex development6.09E-04
33GO:0080142: regulation of salicylic acid biosynthetic process6.09E-04
34GO:0072488: ammonium transmembrane transport6.09E-04
35GO:0010363: regulation of plant-type hypersensitive response6.09E-04
36GO:0009615: response to virus8.22E-04
37GO:0034314: Arp2/3 complex-mediated actin nucleation9.42E-04
38GO:1900425: negative regulation of defense response to bacterium9.42E-04
39GO:0048317: seed morphogenesis9.42E-04
40GO:0035556: intracellular signal transduction1.08E-03
41GO:0009423: chorismate biosynthetic process1.12E-03
42GO:0070370: cellular heat acclimation1.31E-03
43GO:1900056: negative regulation of leaf senescence1.31E-03
44GO:0006491: N-glycan processing1.51E-03
45GO:1900150: regulation of defense response to fungus1.51E-03
46GO:0032875: regulation of DNA endoreduplication1.51E-03
47GO:0006887: exocytosis1.57E-03
48GO:0048193: Golgi vesicle transport1.72E-03
49GO:0000902: cell morphogenesis1.95E-03
50GO:0000165: MAPK cascade2.05E-03
51GO:0009870: defense response signaling pathway, resistance gene-dependent2.41E-03
52GO:0009073: aromatic amino acid family biosynthetic process2.66E-03
53GO:0016925: protein sumoylation2.92E-03
54GO:0018105: peptidyl-serine phosphorylation3.31E-03
55GO:0007015: actin filament organization3.45E-03
56GO:0006446: regulation of translational initiation3.45E-03
57GO:0034605: cellular response to heat3.45E-03
58GO:0006952: defense response3.69E-03
59GO:0009825: multidimensional cell growth3.73E-03
60GO:0009863: salicylic acid mediated signaling pathway4.31E-03
61GO:0006487: protein N-linked glycosylation4.31E-03
62GO:0048278: vesicle docking4.92E-03
63GO:0003333: amino acid transmembrane transport4.92E-03
64GO:0016226: iron-sulfur cluster assembly5.24E-03
65GO:0009789: positive regulation of abscisic acid-activated signaling pathway6.22E-03
66GO:0000413: protein peptidyl-prolyl isomerization6.57E-03
67GO:0010118: stomatal movement6.57E-03
68GO:0061025: membrane fusion7.28E-03
69GO:0010193: response to ozone8.01E-03
70GO:0006891: intra-Golgi vesicle-mediated transport8.01E-03
71GO:0016032: viral process8.39E-03
72GO:0010090: trichome morphogenesis8.77E-03
73GO:0006970: response to osmotic stress9.21E-03
74GO:0006904: vesicle docking involved in exocytosis9.56E-03
75GO:0051607: defense response to virus9.96E-03
76GO:0000910: cytokinesis9.96E-03
77GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.08E-02
78GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.10E-02
79GO:0006906: vesicle fusion1.12E-02
80GO:0016310: phosphorylation1.13E-02
81GO:0046777: protein autophosphorylation1.13E-02
82GO:0044550: secondary metabolite biosynthetic process1.15E-02
83GO:0006886: intracellular protein transport1.31E-02
84GO:0042742: defense response to bacterium1.32E-02
85GO:0006865: amino acid transport1.43E-02
86GO:0009867: jasmonic acid mediated signaling pathway1.48E-02
87GO:0006839: mitochondrial transport1.62E-02
88GO:0006897: endocytosis1.67E-02
89GO:0009651: response to salt stress1.80E-02
90GO:0008643: carbohydrate transport1.87E-02
91GO:0006855: drug transmembrane transport1.97E-02
92GO:0031347: regulation of defense response2.02E-02
93GO:0006486: protein glycosylation2.19E-02
94GO:0009624: response to nematode2.81E-02
95GO:0007275: multicellular organism development3.09E-02
96GO:0006457: protein folding3.61E-02
97GO:0006413: translational initiation3.94E-02
98GO:0009739: response to gibberellin4.49E-02
99GO:0006470: protein dephosphorylation4.56E-02
100GO:0007166: cell surface receptor signaling pathway4.56E-02
101GO:0009617: response to bacterium4.70E-02
RankGO TermAdjusted P value
1GO:0090417: N-methylnicotinate transporter activity0.00E+00
2GO:0090416: nicotinate transporter activity0.00E+00
3GO:0003856: 3-dehydroquinate synthase activity0.00E+00
4GO:0016301: kinase activity2.51E-08
5GO:0005524: ATP binding2.88E-05
6GO:0004708: MAP kinase kinase activity3.94E-05
7GO:0004674: protein serine/threonine kinase activity4.37E-05
8GO:0008446: GDP-mannose 4,6-dehydratase activity7.90E-05
9GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity7.90E-05
10GO:0090422: thiamine pyrophosphate transporter activity7.90E-05
11GO:0080042: ADP-glucose pyrophosphohydrolase activity7.90E-05
12GO:0080041: ADP-ribose pyrophosphohydrolase activity1.89E-04
13GO:0017110: nucleoside-diphosphatase activity1.89E-04
14GO:0019948: SUMO activating enzyme activity3.17E-04
15GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity4.58E-04
16GO:0005509: calcium ion binding5.31E-04
17GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.35E-04
18GO:0047631: ADP-ribose diphosphatase activity7.72E-04
19GO:0009931: calcium-dependent protein serine/threonine kinase activity9.12E-04
20GO:0000210: NAD+ diphosphatase activity9.42E-04
21GO:0008519: ammonium transmembrane transporter activity9.42E-04
22GO:0004683: calmodulin-dependent protein kinase activity9.59E-04
23GO:0004559: alpha-mannosidase activity1.12E-03
24GO:0005267: potassium channel activity1.72E-03
25GO:0071949: FAD binding1.95E-03
26GO:0005515: protein binding1.95E-03
27GO:0008047: enzyme activator activity2.41E-03
28GO:0005543: phospholipid binding2.66E-03
29GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.45E-03
30GO:0043130: ubiquitin binding4.31E-03
31GO:0004672: protein kinase activity5.18E-03
32GO:0022891: substrate-specific transmembrane transporter activity5.56E-03
33GO:0008514: organic anion transmembrane transporter activity5.89E-03
34GO:0003713: transcription coactivator activity6.92E-03
35GO:0043531: ADP binding9.37E-03
36GO:0005200: structural constituent of cytoskeleton9.56E-03
37GO:0005525: GTP binding1.01E-02
38GO:0043565: sequence-specific DNA binding1.06E-02
39GO:0015238: drug transmembrane transporter activity1.29E-02
40GO:0044212: transcription regulatory region DNA binding1.32E-02
41GO:0000149: SNARE binding1.57E-02
42GO:0004712: protein serine/threonine/tyrosine kinase activity1.57E-02
43GO:0005484: SNAP receptor activity1.77E-02
44GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.97E-02
45GO:0051287: NAD binding2.02E-02
46GO:0015171: amino acid transmembrane transporter activity2.35E-02
47GO:0008234: cysteine-type peptidase activity2.35E-02
48GO:0022857: transmembrane transporter activity2.69E-02
49GO:0003779: actin binding2.75E-02
50GO:0015035: protein disulfide oxidoreductase activity2.87E-02
51GO:0015144: carbohydrate transmembrane transporter activity3.75E-02
52GO:0008565: protein transporter activity3.75E-02
53GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.94E-02
54GO:0015297: antiporter activity4.01E-02
55GO:0005351: sugar:proton symporter activity4.08E-02
56GO:0005516: calmodulin binding4.18E-02
57GO:0003743: translation initiation factor activity4.63E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.88E-05
2GO:0005885: Arp2/3 protein complex1.12E-03
3GO:0005768: endosome2.46E-03
4GO:0005829: cytosol2.90E-03
5GO:0012505: endomembrane system3.12E-03
6GO:0005795: Golgi stack3.73E-03
7GO:0005905: clathrin-coated pit4.92E-03
8GO:0005794: Golgi apparatus5.01E-03
9GO:0030136: clathrin-coated vesicle6.22E-03
10GO:0009504: cell plate7.64E-03
11GO:0000145: exocyst8.39E-03
12GO:0005802: trans-Golgi network9.81E-03
13GO:0031201: SNARE complex1.67E-02
14GO:0005737: cytoplasm1.76E-02
15GO:0090406: pollen tube1.77E-02
16GO:0010008: endosome membrane2.52E-02
17GO:0016021: integral component of membrane4.99E-02
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Gene type



Gene DE type