GO Enrichment Analysis of Co-expressed Genes with
AT2G38480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 5 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.63E-06 |
| 6 | GO:0010189: vitamin E biosynthetic process | 3.14E-05 |
| 7 | GO:0055114: oxidation-reduction process | 3.70E-05 |
| 8 | GO:0009791: post-embryonic development | 3.77E-05 |
| 9 | GO:0010027: thylakoid membrane organization | 7.43E-05 |
| 10 | GO:0051775: response to redox state | 9.88E-05 |
| 11 | GO:0009443: pyridoxal 5'-phosphate salvage | 9.88E-05 |
| 12 | GO:1904966: positive regulation of vitamin E biosynthetic process | 9.88E-05 |
| 13 | GO:0006659: phosphatidylserine biosynthetic process | 9.88E-05 |
| 14 | GO:1904964: positive regulation of phytol biosynthetic process | 9.88E-05 |
| 15 | GO:0042371: vitamin K biosynthetic process | 9.88E-05 |
| 16 | GO:0019684: photosynthesis, light reaction | 1.48E-04 |
| 17 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.72E-04 |
| 18 | GO:0051645: Golgi localization | 2.32E-04 |
| 19 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.32E-04 |
| 20 | GO:0060151: peroxisome localization | 2.32E-04 |
| 21 | GO:0051646: mitochondrion localization | 3.86E-04 |
| 22 | GO:0090436: leaf pavement cell development | 3.86E-04 |
| 23 | GO:0015979: photosynthesis | 4.46E-04 |
| 24 | GO:0006107: oxaloacetate metabolic process | 5.54E-04 |
| 25 | GO:0008654: phospholipid biosynthetic process | 7.16E-04 |
| 26 | GO:0006109: regulation of carbohydrate metabolic process | 7.37E-04 |
| 27 | GO:0010107: potassium ion import | 7.37E-04 |
| 28 | GO:0006546: glycine catabolic process | 7.37E-04 |
| 29 | GO:0006021: inositol biosynthetic process | 7.37E-04 |
| 30 | GO:0006734: NADH metabolic process | 7.37E-04 |
| 31 | GO:0098719: sodium ion import across plasma membrane | 9.32E-04 |
| 32 | GO:0010236: plastoquinone biosynthetic process | 9.32E-04 |
| 33 | GO:0000278: mitotic cell cycle | 9.32E-04 |
| 34 | GO:0009228: thiamine biosynthetic process | 1.14E-03 |
| 35 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.14E-03 |
| 36 | GO:0050665: hydrogen peroxide biosynthetic process | 1.14E-03 |
| 37 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.14E-03 |
| 38 | GO:0015995: chlorophyll biosynthetic process | 1.27E-03 |
| 39 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 1.36E-03 |
| 40 | GO:0009854: oxidative photosynthetic carbon pathway | 1.36E-03 |
| 41 | GO:0048564: photosystem I assembly | 1.84E-03 |
| 42 | GO:0009690: cytokinin metabolic process | 1.84E-03 |
| 43 | GO:0006605: protein targeting | 1.84E-03 |
| 44 | GO:0055075: potassium ion homeostasis | 1.84E-03 |
| 45 | GO:0006810: transport | 2.02E-03 |
| 46 | GO:0071482: cellular response to light stimulus | 2.10E-03 |
| 47 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.10E-03 |
| 48 | GO:0017004: cytochrome complex assembly | 2.10E-03 |
| 49 | GO:0090333: regulation of stomatal closure | 2.37E-03 |
| 50 | GO:0007346: regulation of mitotic cell cycle | 2.65E-03 |
| 51 | GO:0051453: regulation of intracellular pH | 2.65E-03 |
| 52 | GO:0043069: negative regulation of programmed cell death | 2.95E-03 |
| 53 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.25E-03 |
| 54 | GO:0043085: positive regulation of catalytic activity | 3.25E-03 |
| 55 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.25E-03 |
| 56 | GO:0030048: actin filament-based movement | 3.89E-03 |
| 57 | GO:0006108: malate metabolic process | 3.89E-03 |
| 58 | GO:0009767: photosynthetic electron transport chain | 3.89E-03 |
| 59 | GO:0048467: gynoecium development | 4.22E-03 |
| 60 | GO:0010143: cutin biosynthetic process | 4.22E-03 |
| 61 | GO:0010020: chloroplast fission | 4.22E-03 |
| 62 | GO:0019853: L-ascorbic acid biosynthetic process | 4.57E-03 |
| 63 | GO:0042023: DNA endoreduplication | 4.92E-03 |
| 64 | GO:0006633: fatty acid biosynthetic process | 6.76E-03 |
| 65 | GO:0009686: gibberellin biosynthetic process | 6.82E-03 |
| 66 | GO:0006012: galactose metabolic process | 6.82E-03 |
| 67 | GO:0009735: response to cytokinin | 7.02E-03 |
| 68 | GO:0009561: megagametogenesis | 7.23E-03 |
| 69 | GO:0009306: protein secretion | 7.23E-03 |
| 70 | GO:0016117: carotenoid biosynthetic process | 7.64E-03 |
| 71 | GO:0010268: brassinosteroid homeostasis | 8.50E-03 |
| 72 | GO:0010154: fruit development | 8.50E-03 |
| 73 | GO:0006885: regulation of pH | 8.50E-03 |
| 74 | GO:0006662: glycerol ether metabolic process | 8.50E-03 |
| 75 | GO:0006814: sodium ion transport | 8.94E-03 |
| 76 | GO:0016132: brassinosteroid biosynthetic process | 9.85E-03 |
| 77 | GO:0032502: developmental process | 1.03E-02 |
| 78 | GO:0010090: trichome morphogenesis | 1.08E-02 |
| 79 | GO:0016125: sterol metabolic process | 1.13E-02 |
| 80 | GO:0006974: cellular response to DNA damage stimulus | 1.38E-02 |
| 81 | GO:0016049: cell growth | 1.49E-02 |
| 82 | GO:0009817: defense response to fungus, incompatible interaction | 1.54E-02 |
| 83 | GO:0018298: protein-chromophore linkage | 1.54E-02 |
| 84 | GO:0006499: N-terminal protein myristoylation | 1.65E-02 |
| 85 | GO:0007568: aging | 1.71E-02 |
| 86 | GO:0016051: carbohydrate biosynthetic process | 1.82E-02 |
| 87 | GO:0006099: tricarboxylic acid cycle | 1.88E-02 |
| 88 | GO:0034599: cellular response to oxidative stress | 1.88E-02 |
| 89 | GO:0006839: mitochondrial transport | 2.00E-02 |
| 90 | GO:0032259: methylation | 2.02E-02 |
| 91 | GO:0006631: fatty acid metabolic process | 2.06E-02 |
| 92 | GO:0006486: protein glycosylation | 2.70E-02 |
| 93 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.77E-02 |
| 94 | GO:0043086: negative regulation of catalytic activity | 3.04E-02 |
| 95 | GO:0051726: regulation of cell cycle | 3.62E-02 |
| 96 | GO:0051301: cell division | 4.08E-02 |
| 97 | GO:0009845: seed germination | 4.30E-02 |
| 98 | GO:0042744: hydrogen peroxide catabolic process | 4.46E-02 |
| 99 | GO:0009790: embryo development | 4.54E-02 |
| 100 | GO:0055085: transmembrane transport | 4.74E-02 |
| 101 | GO:0006413: translational initiation | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 4 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 5 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 6 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 7 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 8 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.78E-06 |
| 9 | GO:0004033: aldo-keto reductase (NADP) activity | 5.57E-05 |
| 10 | GO:0080132: fatty acid alpha-hydroxylase activity | 9.88E-05 |
| 11 | GO:0051777: ent-kaurenoate oxidase activity | 9.88E-05 |
| 12 | GO:0008746: NAD(P)+ transhydrogenase activity | 9.88E-05 |
| 13 | GO:0004328: formamidase activity | 9.88E-05 |
| 14 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 9.88E-05 |
| 15 | GO:0004047: aminomethyltransferase activity | 2.32E-04 |
| 16 | GO:0004312: fatty acid synthase activity | 2.32E-04 |
| 17 | GO:0004512: inositol-3-phosphate synthase activity | 2.32E-04 |
| 18 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 2.32E-04 |
| 19 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.32E-04 |
| 20 | GO:0070402: NADPH binding | 3.86E-04 |
| 21 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 3.86E-04 |
| 22 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 5.54E-04 |
| 23 | GO:0016851: magnesium chelatase activity | 5.54E-04 |
| 24 | GO:0003883: CTP synthase activity | 5.54E-04 |
| 25 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 5.54E-04 |
| 26 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 5.54E-04 |
| 27 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 5.54E-04 |
| 28 | GO:0004045: aminoacyl-tRNA hydrolase activity | 7.37E-04 |
| 29 | GO:0043495: protein anchor | 7.37E-04 |
| 30 | GO:0008891: glycolate oxidase activity | 7.37E-04 |
| 31 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 7.37E-04 |
| 32 | GO:0048038: quinone binding | 7.65E-04 |
| 33 | GO:0016846: carbon-sulfur lyase activity | 9.32E-04 |
| 34 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.14E-03 |
| 35 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.14E-03 |
| 36 | GO:0015081: sodium ion transmembrane transporter activity | 1.14E-03 |
| 37 | GO:0016615: malate dehydrogenase activity | 1.14E-03 |
| 38 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.14E-03 |
| 39 | GO:0008200: ion channel inhibitor activity | 1.14E-03 |
| 40 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.36E-03 |
| 41 | GO:0030060: L-malate dehydrogenase activity | 1.36E-03 |
| 42 | GO:0019899: enzyme binding | 1.59E-03 |
| 43 | GO:0003746: translation elongation factor activity | 1.77E-03 |
| 44 | GO:0008135: translation factor activity, RNA binding | 2.10E-03 |
| 45 | GO:0008047: enzyme activator activity | 2.95E-03 |
| 46 | GO:0015020: glucuronosyltransferase activity | 2.95E-03 |
| 47 | GO:0015386: potassium:proton antiporter activity | 3.25E-03 |
| 48 | GO:0008378: galactosyltransferase activity | 3.57E-03 |
| 49 | GO:0031072: heat shock protein binding | 3.89E-03 |
| 50 | GO:0003774: motor activity | 4.22E-03 |
| 51 | GO:0016746: transferase activity, transferring acyl groups | 4.44E-03 |
| 52 | GO:0004857: enzyme inhibitor activity | 5.28E-03 |
| 53 | GO:0043130: ubiquitin binding | 5.28E-03 |
| 54 | GO:0005528: FK506 binding | 5.28E-03 |
| 55 | GO:0022891: substrate-specific transmembrane transporter activity | 6.82E-03 |
| 56 | GO:0016491: oxidoreductase activity | 6.91E-03 |
| 57 | GO:0047134: protein-disulfide reductase activity | 7.64E-03 |
| 58 | GO:0004791: thioredoxin-disulfide reductase activity | 8.94E-03 |
| 59 | GO:0010181: FMN binding | 8.94E-03 |
| 60 | GO:0019901: protein kinase binding | 9.39E-03 |
| 61 | GO:0042802: identical protein binding | 9.44E-03 |
| 62 | GO:0015385: sodium:proton antiporter activity | 1.08E-02 |
| 63 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.08E-02 |
| 64 | GO:0016791: phosphatase activity | 1.13E-02 |
| 65 | GO:0008483: transaminase activity | 1.18E-02 |
| 66 | GO:0016168: chlorophyll binding | 1.33E-02 |
| 67 | GO:0008375: acetylglucosaminyltransferase activity | 1.38E-02 |
| 68 | GO:0004721: phosphoprotein phosphatase activity | 1.43E-02 |
| 69 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.49E-02 |
| 70 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.54E-02 |
| 71 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.65E-02 |
| 72 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.71E-02 |
| 73 | GO:0003993: acid phosphatase activity | 1.88E-02 |
| 74 | GO:0005506: iron ion binding | 1.89E-02 |
| 75 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.94E-02 |
| 76 | GO:0042393: histone binding | 2.00E-02 |
| 77 | GO:0003924: GTPase activity | 2.11E-02 |
| 78 | GO:0004185: serine-type carboxypeptidase activity | 2.18E-02 |
| 79 | GO:0009055: electron carrier activity | 2.27E-02 |
| 80 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.44E-02 |
| 81 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.11E-02 |
| 82 | GO:0003779: actin binding | 3.39E-02 |
| 83 | GO:0020037: heme binding | 3.40E-02 |
| 84 | GO:0051082: unfolded protein binding | 3.47E-02 |
| 85 | GO:0015035: protein disulfide oxidoreductase activity | 3.54E-02 |
| 86 | GO:0008026: ATP-dependent helicase activity | 3.62E-02 |
| 87 | GO:0016758: transferase activity, transferring hexosyl groups | 3.99E-02 |
| 88 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.15E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 7.81E-20 |
| 2 | GO:0009570: chloroplast stroma | 3.21E-11 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.59E-11 |
| 4 | GO:0009941: chloroplast envelope | 3.76E-10 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 3.69E-06 |
| 6 | GO:0009579: thylakoid | 6.33E-06 |
| 7 | GO:0009534: chloroplast thylakoid | 6.53E-06 |
| 8 | GO:0009654: photosystem II oxygen evolving complex | 1.11E-05 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.74E-05 |
| 10 | GO:0009344: nitrite reductase complex [NAD(P)H] | 9.88E-05 |
| 11 | GO:0031977: thylakoid lumen | 1.98E-04 |
| 12 | GO:0030095: chloroplast photosystem II | 2.25E-04 |
| 13 | GO:0031969: chloroplast membrane | 3.63E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 3.86E-04 |
| 15 | GO:0019898: extrinsic component of membrane | 7.16E-04 |
| 16 | GO:0048046: apoplast | 8.35E-04 |
| 17 | GO:0010319: stromule | 9.73E-04 |
| 18 | GO:0009295: nucleoid | 9.73E-04 |
| 19 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 2.10E-03 |
| 20 | GO:0009539: photosystem II reaction center | 2.10E-03 |
| 21 | GO:0016459: myosin complex | 2.95E-03 |
| 22 | GO:0009508: plastid chromosome | 3.89E-03 |
| 23 | GO:0042651: thylakoid membrane | 5.65E-03 |
| 24 | GO:0009536: plastid | 6.20E-03 |
| 25 | GO:0009522: photosystem I | 8.94E-03 |
| 26 | GO:0009523: photosystem II | 9.39E-03 |
| 27 | GO:0030529: intracellular ribonucleoprotein complex | 1.28E-02 |
| 28 | GO:0019005: SCF ubiquitin ligase complex | 1.54E-02 |
| 29 | GO:0016021: integral component of membrane | 3.35E-02 |
| 30 | GO:0009706: chloroplast inner membrane | 3.47E-02 |
| 31 | GO:0005618: cell wall | 3.58E-02 |
| 32 | GO:0005777: peroxisome | 4.29E-02 |