co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G37750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
2	GO:0006858: extracellular transport	0.00E+00
3	GO:0046680: response to DDT	0.00E+00
4	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:0010398: xylogalacturonan metabolic process	0.00E+00
7	GO:0016102: diterpenoid biosynthetic process	0.00E+00
8	GO:0072722: response to amitrole	0.00E+00
9	GO:0006903: vesicle targeting	0.00E+00
10	GO:0046686: response to cadmium ion	5.19E-06
11	GO:0006102: isocitrate metabolic process	2.06E-04
12	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.32E-04
13	GO:1901430: positive regulation of syringal lignin biosynthetic process	2.32E-04
14	GO:0000032: cell wall mannoprotein biosynthetic process	2.32E-04
15	GO:0042964: thioredoxin reduction	2.32E-04
16	GO:1900384: regulation of flavonol biosynthetic process	2.32E-04
17	GO:0015031: protein transport	3.35E-04
18	GO:0006888: ER to Golgi vesicle-mediated transport	4.81E-04
19	GO:0010372: positive regulation of gibberellin biosynthetic process	5.15E-04
20	GO:0080026: response to indolebutyric acid	5.15E-04
21	GO:0015709: thiosulfate transport	5.15E-04
22	GO:0071422: succinate transmembrane transport	5.15E-04
23	GO:0046939: nucleotide phosphorylation	5.15E-04
24	GO:0009805: coumarin biosynthetic process	5.15E-04
25	GO:0006807: nitrogen compound metabolic process	6.45E-04
26	GO:0006099: tricarboxylic acid cycle	7.81E-04
27	GO:0033591: response to L-ascorbic acid	8.37E-04
28	GO:0009062: fatty acid catabolic process	8.37E-04
29	GO:0006556: S-adenosylmethionine biosynthetic process	8.37E-04
30	GO:0010253: UDP-rhamnose biosynthetic process	8.37E-04
31	GO:0090630: activation of GTPase activity	8.37E-04
32	GO:0040009: regulation of growth rate	8.37E-04
33	GO:0006517: protein deglycosylation	8.37E-04
34	GO:0010272: response to silver ion	8.37E-04
35	GO:0006511: ubiquitin-dependent protein catabolic process	1.12E-03
36	GO:0015729: oxaloacetate transport	1.19E-03
37	GO:0006612: protein targeting to membrane	1.19E-03
38	GO:0006893: Golgi to plasma membrane transport	1.19E-03
39	GO:0080024: indolebutyric acid metabolic process	1.19E-03
40	GO:0009298: GDP-mannose biosynthetic process	1.19E-03
41	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	1.19E-03
42	GO:1902584: positive regulation of response to water deprivation	1.59E-03
43	GO:0015991: ATP hydrolysis coupled proton transport	1.81E-03
44	GO:0006096: glycolytic process	1.81E-03
45	GO:0045927: positive regulation of growth	2.03E-03
46	GO:0000304: response to singlet oxygen	2.03E-03
47	GO:0071423: malate transmembrane transport	2.03E-03
48	GO:0098719: sodium ion import across plasma membrane	2.03E-03
49	GO:0006564: L-serine biosynthetic process	2.03E-03
50	GO:0005513: detection of calcium ion	2.03E-03
51	GO:0006555: methionine metabolic process	2.50E-03
52	GO:0010315: auxin efflux	2.50E-03
53	GO:0007035: vacuolar acidification	2.50E-03
54	GO:0035435: phosphate ion transmembrane transport	2.50E-03
55	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.50E-03
56	GO:0030163: protein catabolic process	2.73E-03
57	GO:0019760: glucosinolate metabolic process	2.90E-03
58	GO:0010252: auxin homeostasis	2.90E-03
59	GO:0019509: L-methionine salvage from methylthioadenosine	3.00E-03
60	GO:0034389: lipid particle organization	3.00E-03
61	GO:0009612: response to mechanical stimulus	3.00E-03
62	GO:0009082: branched-chain amino acid biosynthetic process	3.00E-03
63	GO:0009099: valine biosynthetic process	3.00E-03
64	GO:0009554: megasporogenesis	3.00E-03
65	GO:0080113: regulation of seed growth	3.00E-03
66	GO:0006886: intracellular protein transport	3.06E-03
67	GO:0009058: biosynthetic process	3.26E-03
68	GO:0009615: response to virus	3.46E-03
69	GO:0009651: response to salt stress	3.49E-03
70	GO:0080186: developmental vegetative growth	3.54E-03
71	GO:0071669: plant-type cell wall organization or biogenesis	3.54E-03
72	GO:0008272: sulfate transport	3.54E-03
73	GO:0080027: response to herbivore	3.54E-03
74	GO:0009751: response to salicylic acid	3.92E-03
75	GO:0006402: mRNA catabolic process	4.10E-03
76	GO:0006491: N-glycan processing	4.10E-03
77	GO:0060321: acceptance of pollen	4.70E-03
78	GO:0007186: G-protein coupled receptor signaling pathway	4.70E-03
79	GO:0019430: removal of superoxide radicals	4.70E-03
80	GO:0010120: camalexin biosynthetic process	4.70E-03
81	GO:0009097: isoleucine biosynthetic process	4.70E-03
82	GO:0009699: phenylpropanoid biosynthetic process	4.70E-03
83	GO:0006002: fructose 6-phosphate metabolic process	4.70E-03
84	GO:0009407: toxin catabolic process	4.97E-03
85	GO:0055114: oxidation-reduction process	5.20E-03
86	GO:0009821: alkaloid biosynthetic process	5.32E-03
87	GO:0006754: ATP biosynthetic process	5.32E-03
88	GO:0046685: response to arsenic-containing substance	5.32E-03
89	GO:0009617: response to bacterium	5.75E-03
90	GO:0009098: leucine biosynthetic process	5.97E-03
91	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.97E-03
92	GO:0051453: regulation of intracellular pH	5.97E-03
93	GO:0051555: flavonol biosynthetic process	6.65E-03
94	GO:0006032: chitin catabolic process	6.65E-03
95	GO:0009688: abscisic acid biosynthetic process	6.65E-03
96	GO:0043069: negative regulation of programmed cell death	6.65E-03
97	GO:0009682: induced systemic resistance	7.35E-03
98	GO:0000272: polysaccharide catabolic process	7.35E-03
99	GO:0006790: sulfur compound metabolic process	8.08E-03
100	GO:0016925: protein sumoylation	8.08E-03
101	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.08E-03
102	GO:0009636: response to toxic substance	8.27E-03
103	GO:0055046: microgametogenesis	8.84E-03
104	GO:0009846: pollen germination	9.24E-03
105	GO:0034605: cellular response to heat	9.62E-03
106	GO:0051603: proteolysis involved in cellular protein catabolic process	1.03E-02
107	GO:0007031: peroxisome organization	1.04E-02
108	GO:0019853: L-ascorbic acid biosynthetic process	1.04E-02
109	GO:0046854: phosphatidylinositol phosphorylation	1.04E-02
110	GO:0010053: root epidermal cell differentiation	1.04E-02
111	GO:0009225: nucleotide-sugar metabolic process	1.04E-02
112	GO:0000162: tryptophan biosynthetic process	1.13E-02
113	GO:0034976: response to endoplasmic reticulum stress	1.13E-02
114	GO:0006874: cellular calcium ion homeostasis	1.30E-02
115	GO:0019915: lipid storage	1.39E-02
116	GO:0006366: transcription from RNA polymerase II promoter	1.39E-02
117	GO:0016998: cell wall macromolecule catabolic process	1.39E-02
118	GO:0015992: proton transport	1.39E-02
119	GO:0006730: one-carbon metabolic process	1.48E-02
120	GO:0030433: ubiquitin-dependent ERAD pathway	1.48E-02
121	GO:0019748: secondary metabolic process	1.48E-02
122	GO:0030245: cellulose catabolic process	1.48E-02
123	GO:0009693: ethylene biosynthetic process	1.57E-02
124	GO:0010227: floral organ abscission	1.57E-02
125	GO:0009561: megagametogenesis	1.67E-02
126	GO:0042127: regulation of cell proliferation	1.67E-02
127	GO:0009306: protein secretion	1.67E-02
128	GO:0010089: xylem development	1.67E-02
129	GO:0042147: retrograde transport, endosome to Golgi	1.77E-02
130	GO:0051028: mRNA transport	1.77E-02
131	GO:0042631: cellular response to water deprivation	1.87E-02
132	GO:0045489: pectin biosynthetic process	1.97E-02
133	GO:0042744: hydrogen peroxide catabolic process	2.02E-02
134	GO:0015986: ATP synthesis coupled proton transport	2.07E-02
135	GO:0006814: sodium ion transport	2.07E-02
136	GO:0009646: response to absence of light	2.07E-02
137	GO:0009851: auxin biosynthetic process	2.18E-02
138	GO:0006635: fatty acid beta-oxidation	2.29E-02
139	GO:0031047: gene silencing by RNA	2.40E-02
140	GO:0010150: leaf senescence	2.46E-02
141	GO:0071281: cellular response to iron ion	2.51E-02
142	GO:0006464: cellular protein modification process	2.62E-02
143	GO:0006914: autophagy	2.62E-02
144	GO:0009567: double fertilization forming a zygote and endosperm	2.62E-02
145	GO:0006904: vesicle docking involved in exocytosis	2.74E-02
146	GO:0071805: potassium ion transmembrane transport	2.74E-02
147	GO:0006979: response to oxidative stress	2.79E-02
148	GO:0009627: systemic acquired resistance	3.22E-02
149	GO:0048573: photoperiodism, flowering	3.34E-02
150	GO:0016049: cell growth	3.47E-02
151	GO:0010311: lateral root formation	3.72E-02
152	GO:0048767: root hair elongation	3.72E-02
153	GO:0010043: response to zinc ion	3.98E-02
154	GO:0007568: aging	3.98E-02
155	GO:0009860: pollen tube growth	4.08E-02
156	GO:0045087: innate immune response	4.25E-02
157	GO:0016051: carbohydrate biosynthetic process	4.25E-02
158	GO:0006839: mitochondrial transport	4.67E-02
159	GO:0006887: exocytosis	4.81E-02
160	GO:0006897: endocytosis	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0070577: lysine-acetylated histone binding	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0080013: (E,E)-geranyllinalool synthase activity	0.00E+00
4	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
5	GO:0016504: peptidase activator activity	0.00E+00
6	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
7	GO:0004449: isocitrate dehydrogenase (NAD+) activity	2.08E-05
8	GO:0004298: threonine-type endopeptidase activity	8.49E-05
9	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	8.88E-05
10	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	8.88E-05
11	GO:0070401: NADP+ binding	2.32E-04
12	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.32E-04
13	GO:0048037: cofactor binding	2.32E-04
14	GO:0004476: mannose-6-phosphate isomerase activity	2.32E-04
15	GO:0019786: Atg8-specific protease activity	2.32E-04
16	GO:0016229: steroid dehydrogenase activity	2.32E-04
17	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.32E-04
18	GO:0000287: magnesium ion binding	2.92E-04
19	GO:0004743: pyruvate kinase activity	3.67E-04
20	GO:0030955: potassium ion binding	3.67E-04
21	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.15E-04
22	GO:1990585: hydroxyproline O-arabinosyltransferase activity	5.15E-04
23	GO:0019779: Atg8 activating enzyme activity	5.15E-04
24	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.15E-04
25	GO:0015117: thiosulfate transmembrane transporter activity	5.15E-04
26	GO:1901677: phosphate transmembrane transporter activity	5.15E-04
27	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.15E-04
28	GO:0052739: phosphatidylserine 1-acylhydrolase activity	5.15E-04
29	GO:0010297: heteropolysaccharide binding	5.15E-04
30	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.15E-04
31	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	5.15E-04
32	GO:0004617: phosphoglycerate dehydrogenase activity	5.15E-04
33	GO:0010280: UDP-L-rhamnose synthase activity	5.15E-04
34	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	8.37E-04
35	GO:0005310: dicarboxylic acid transmembrane transporter activity	8.37E-04
36	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	8.37E-04
37	GO:0015141: succinate transmembrane transporter activity	8.37E-04
38	GO:0004478: methionine adenosyltransferase activity	8.37E-04
39	GO:0019201: nucleotide kinase activity	1.19E-03
40	GO:0015131: oxaloacetate transmembrane transporter activity	1.19E-03
41	GO:0052656: L-isoleucine transaminase activity	1.19E-03
42	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.19E-03
43	GO:0052654: L-leucine transaminase activity	1.19E-03
44	GO:0017077: oxidative phosphorylation uncoupler activity	1.19E-03
45	GO:0052655: L-valine transaminase activity	1.19E-03
46	GO:0004084: branched-chain-amino-acid transaminase activity	1.59E-03
47	GO:0070628: proteasome binding	1.59E-03
48	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.59E-03
49	GO:0004031: aldehyde oxidase activity	1.59E-03
50	GO:0050302: indole-3-acetaldehyde oxidase activity	1.59E-03
51	GO:0004930: G-protein coupled receptor activity	1.59E-03
52	GO:0019776: Atg8 ligase activity	1.59E-03
53	GO:0010279: indole-3-acetic acid amido synthetase activity	1.59E-03
54	GO:0008374: O-acyltransferase activity	2.03E-03
55	GO:0004040: amidase activity	2.03E-03
56	GO:0031386: protein tag	2.03E-03
57	GO:0051117: ATPase binding	2.50E-03
58	GO:0035252: UDP-xylosyltransferase activity	2.50E-03
59	GO:0036402: proteasome-activating ATPase activity	2.50E-03
60	GO:0004518: nuclease activity	2.56E-03
61	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.00E-03
62	GO:0004017: adenylate kinase activity	3.00E-03
63	GO:0003950: NAD+ ADP-ribosyltransferase activity	3.00E-03
64	GO:0003872: 6-phosphofructokinase activity	3.54E-03
65	GO:0015140: malate transmembrane transporter activity	3.54E-03
66	GO:0043295: glutathione binding	3.54E-03
67	GO:0008375: acetylglucosaminyltransferase activity	3.86E-03
68	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.07E-03
69	GO:0004033: aldo-keto reductase (NADP) activity	4.10E-03
70	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	4.70E-03
71	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.32E-03
72	GO:0003746: translation elongation factor activity	5.71E-03
73	GO:0009672: auxin:proton symporter activity	5.97E-03
74	GO:0016844: strictosidine synthase activity	5.97E-03
75	GO:0004568: chitinase activity	6.65E-03
76	GO:0004364: glutathione transferase activity	7.07E-03
77	GO:0015386: potassium:proton antiporter activity	7.35E-03
78	GO:0046961: proton-transporting ATPase activity, rotational mechanism	7.35E-03
79	GO:0016887: ATPase activity	7.80E-03
80	GO:0004601: peroxidase activity	8.01E-03
81	GO:0015116: sulfate transmembrane transporter activity	8.08E-03
82	GO:0010329: auxin efflux transmembrane transporter activity	8.84E-03
83	GO:0051287: NAD binding	8.91E-03
84	GO:0046872: metal ion binding	9.54E-03
85	GO:0003824: catalytic activity	9.91E-03
86	GO:0008233: peptidase activity	1.03E-02
87	GO:0017025: TBP-class protein binding	1.04E-02
88	GO:0008061: chitin binding	1.04E-02
89	GO:0004970: ionotropic glutamate receptor activity	1.04E-02
90	GO:0005217: intracellular ligand-gated ion channel activity	1.04E-02
91	GO:0001046: core promoter sequence-specific DNA binding	1.21E-02
92	GO:0010333: terpene synthase activity	1.39E-02
93	GO:0004722: protein serine/threonine phosphatase activity	1.49E-02
94	GO:0008810: cellulase activity	1.57E-02
95	GO:0003756: protein disulfide isomerase activity	1.67E-02
96	GO:0030170: pyridoxal phosphate binding	1.97E-02
97	GO:0005199: structural constituent of cell wall	1.97E-02
98	GO:0004791: thioredoxin-disulfide reductase activity	2.07E-02
99	GO:0016853: isomerase activity	2.07E-02
100	GO:0008565: protein transporter activity	2.13E-02
101	GO:0015385: sodium:proton antiporter activity	2.51E-02
102	GO:0008237: metallopeptidase activity	2.74E-02
103	GO:0044212: transcription regulatory region DNA binding	2.75E-02
104	GO:0016597: amino acid binding	2.86E-02
105	GO:0051213: dioxygenase activity	2.98E-02
106	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.59E-02
107	GO:0005096: GTPase activator activity	3.72E-02
108	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.98E-02
109	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.98E-02
110	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.25E-02
111	GO:0050660: flavin adenine dinucleotide binding	4.38E-02
112	GO:0003993: acid phosphatase activity	4.39E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	8.65E-07
2	GO:0005839: proteasome core complex	2.74E-06
3	GO:0005829: cytosol	1.30E-05
4	GO:0012510: trans-Golgi network transport vesicle membrane	2.32E-04
5	GO:0016442: RISC complex	2.32E-04
6	GO:0030130: clathrin coat of trans-Golgi network vesicle	8.37E-04
7	GO:0030132: clathrin coat of coated pit	8.37E-04
8	GO:0009530: primary cell wall	8.37E-04
9	GO:0005775: vacuolar lumen	1.19E-03
10	GO:0005776: autophagosome	1.59E-03
11	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.59E-03
12	GO:0005794: Golgi apparatus	1.77E-03
13	GO:0005737: cytoplasm	1.98E-03
14	GO:0005768: endosome	1.99E-03
15	GO:0005945: 6-phosphofructokinase complex	2.03E-03
16	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	2.03E-03
17	GO:0030127: COPII vesicle coat	2.50E-03
18	GO:0030904: retromer complex	2.50E-03
19	GO:0031597: cytosolic proteasome complex	3.00E-03
20	GO:0031595: nuclear proteasome complex	3.54E-03
21	GO:0000421: autophagosome membrane	4.10E-03
22	GO:0031982: vesicle	4.10E-03
23	GO:0019773: proteasome core complex, alpha-subunit complex	4.70E-03
24	GO:0005811: lipid particle	4.70E-03
25	GO:0031090: organelle membrane	5.32E-03
26	GO:0010494: cytoplasmic stress granule	5.32E-03
27	GO:0005802: trans-Golgi network	5.60E-03
28	GO:0008540: proteasome regulatory particle, base subcomplex	5.97E-03
29	GO:0008541: proteasome regulatory particle, lid subcomplex	7.35E-03
30	GO:0048471: perinuclear region of cytoplasm	7.35E-03
31	GO:0005635: nuclear envelope	1.06E-02
32	GO:0009536: plastid	1.20E-02
33	GO:0005618: cell wall	1.38E-02
34	GO:0031410: cytoplasmic vesicle	1.48E-02
35	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.67E-02
36	GO:0005783: endoplasmic reticulum	1.91E-02
37	GO:0016592: mediator complex	2.40E-02
38	GO:0000145: exocyst	2.40E-02
39	GO:0005886: plasma membrane	2.49E-02
40	GO:0032580: Golgi cisterna membrane	2.62E-02
41	GO:0005778: peroxisomal membrane	2.74E-02
42	GO:0000932: P-body	2.98E-02
43	GO:0005788: endoplasmic reticulum lumen	3.10E-02
44	GO:0009707: chloroplast outer membrane	3.59E-02
45	GO:0005643: nuclear pore	3.59E-02
46	GO:0000325: plant-type vacuole	3.98E-02
47	GO:0005777: peroxisome	4.19E-02
48	GO:0031902: late endosome membrane	4.81E-02