co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G37640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009773: photosynthetic electron transport in photosystem I	2.85E-05
2	GO:0015671: oxygen transport	3.25E-05
3	GO:0015979: photosynthesis	3.46E-05
4	GO:0010207: photosystem II assembly	4.55E-05
5	GO:0090391: granum assembly	1.42E-04
6	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.11E-04
7	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.11E-04
8	GO:0009765: photosynthesis, light harvesting	2.85E-04
9	GO:0006564: L-serine biosynthetic process	3.65E-04
10	GO:0006465: signal peptide processing	3.65E-04
11	GO:0010190: cytochrome b6f complex assembly	4.48E-04
12	GO:0042549: photosystem II stabilization	4.48E-04
13	GO:0010019: chloroplast-nucleus signaling pathway	5.36E-04
14	GO:0009769: photosynthesis, light harvesting in photosystem II	6.27E-04
15	GO:0009645: response to low light intensity stimulus	6.27E-04
16	GO:0009772: photosynthetic electron transport in photosystem II	6.27E-04
17	GO:0048564: photosystem I assembly	7.22E-04
18	GO:0019432: triglyceride biosynthetic process	9.20E-04
19	GO:0055114: oxidation-reduction process	1.00E-03
20	GO:0019684: photosynthesis, light reaction	1.24E-03
21	GO:0043085: positive regulation of catalytic activity	1.24E-03
22	GO:0009767: photosynthetic electron transport chain	1.47E-03
23	GO:0009768: photosynthesis, light harvesting in photosystem I	2.12E-03
24	GO:0019915: lipid storage	2.26E-03
25	GO:0009269: response to desiccation	2.26E-03
26	GO:0015986: ATP synthesis coupled proton transport	3.31E-03
27	GO:0032502: developmental process	3.80E-03
28	GO:0006810: transport	4.91E-03
29	GO:0042128: nitrate assimilation	5.04E-03
30	GO:0015995: chlorophyll biosynthetic process	5.22E-03
31	GO:0016311: dephosphorylation	5.41E-03
32	GO:0009817: defense response to fungus, incompatible interaction	5.60E-03
33	GO:0018298: protein-chromophore linkage	5.60E-03
34	GO:0010218: response to far red light	5.99E-03
35	GO:0009637: response to blue light	6.60E-03
36	GO:0006631: fatty acid metabolic process	7.43E-03
37	GO:0010114: response to red light	7.87E-03
38	GO:0009735: response to cytokinin	8.00E-03
39	GO:0009644: response to high light intensity	8.31E-03
40	GO:0051603: proteolysis involved in cellular protein catabolic process	9.93E-03
41	GO:0009742: brassinosteroid mediated signaling pathway	1.29E-02
42	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	2.36E-02
43	GO:0009409: response to cold	2.41E-02
44	GO:0080167: response to karrikin	2.91E-02
45	GO:0006869: lipid transport	3.53E-02

Rank	GO Term	Adjusted P value
1	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
2	GO:0005344: oxygen transporter activity	3.25E-05
3	GO:0046906: tetrapyrrole binding	3.25E-05
4	GO:0004617: phosphoglycerate dehydrogenase activity	8.18E-05
5	GO:0004751: ribose-5-phosphate isomerase activity	1.42E-04
6	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.85E-04
7	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	5.36E-04
8	GO:0051537: 2 iron, 2 sulfur cluster binding	6.09E-04
9	GO:0019899: enzyme binding	6.27E-04
10	GO:0004022: alcohol dehydrogenase (NAD) activity	1.47E-03
11	GO:0031409: pigment binding	1.85E-03
12	GO:0005528: FK506 binding	1.99E-03
13	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.15E-03
14	GO:0048038: quinone binding	3.63E-03
15	GO:0016491: oxidoreductase activity	4.28E-03
16	GO:0016597: amino acid binding	4.49E-03
17	GO:0016168: chlorophyll binding	4.85E-03
18	GO:0009055: electron carrier activity	5.30E-03
19	GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	5.41E-03
20	GO:0000987: core promoter proximal region sequence-specific DNA binding	6.80E-03
21	GO:0003993: acid phosphatase activity	6.80E-03
22	GO:0004185: serine-type carboxypeptidase activity	7.87E-03
23	GO:0035091: phosphatidylinositol binding	8.31E-03
24	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.76E-03
25	GO:0051287: NAD binding	8.99E-03
26	GO:0019843: rRNA binding	1.46E-02
27	GO:0005509: calcium ion binding	1.64E-02
28	GO:0008233: peptidase activity	2.87E-02
29	GO:0004722: protein serine/threonine phosphatase activity	3.53E-02
30	GO:0008289: lipid binding	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.85E-10
2	GO:0009535: chloroplast thylakoid membrane	5.92E-10
3	GO:0009543: chloroplast thylakoid lumen	7.46E-08
4	GO:0009654: photosystem II oxygen evolving complex	8.89E-07
5	GO:0009579: thylakoid	9.49E-07
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.58E-05
7	GO:0031977: thylakoid lumen	2.24E-05
8	GO:0005787: signal peptidase complex	3.25E-05
9	GO:0009344: nitrite reductase complex [NAD(P)H]	3.25E-05
10	GO:0030095: chloroplast photosystem II	4.55E-05
11	GO:0010287: plastoglobule	9.09E-05
12	GO:0009522: photosystem I	1.57E-04
13	GO:0009523: photosystem II	1.69E-04
14	GO:0019898: extrinsic component of membrane	1.69E-04
15	GO:0009517: PSII associated light-harvesting complex II	2.85E-04
16	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	4.48E-04
17	GO:0009539: photosystem II reaction center	8.20E-04
18	GO:0009941: chloroplast envelope	1.16E-03
19	GO:0009534: chloroplast thylakoid	1.58E-03
20	GO:0030076: light-harvesting complex	1.72E-03
21	GO:0009570: chloroplast stroma	2.07E-03
22	GO:0010319: stromule	4.32E-03
23	GO:0005615: extracellular space	1.98E-02
24	GO:0005874: microtubule	2.84E-02
25	GO:0031969: chloroplast membrane	2.91E-02