co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G34640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061157: mRNA destabilization	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
4	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
5	GO:0017038: protein import	0.00E+00
6	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
7	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
8	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
9	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
10	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
11	GO:0042407: cristae formation	0.00E+00
12	GO:0007638: mechanosensory behavior	0.00E+00
13	GO:0045184: establishment of protein localization	0.00E+00
14	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
15	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
16	GO:0009658: chloroplast organization	8.28E-07
17	GO:0015995: chlorophyll biosynthetic process	4.44E-06
18	GO:0018026: peptidyl-lysine monomethylation	1.65E-05
19	GO:0010020: chloroplast fission	1.87E-05
20	GO:1901259: chloroplast rRNA processing	2.06E-05
21	GO:0046739: transport of virus in multicellular host	1.15E-04
22	GO:0005983: starch catabolic process	2.19E-04
23	GO:0006418: tRNA aminoacylation for protein translation	5.49E-04
24	GO:0042372: phylloquinone biosynthetic process	5.51E-04
25	GO:0005991: trehalose metabolic process	6.19E-04
26	GO:0048363: mucilage pectin metabolic process	6.19E-04
27	GO:0042659: regulation of cell fate specification	6.19E-04
28	GO:0000025: maltose catabolic process	6.19E-04
29	GO:0070509: calcium ion import	6.19E-04
30	GO:0005980: glycogen catabolic process	6.19E-04
31	GO:0030198: extracellular matrix organization	6.19E-04
32	GO:0010442: guard cell morphogenesis	6.19E-04
33	GO:0010063: positive regulation of trichoblast fate specification	6.19E-04
34	GO:0090558: plant epidermis development	6.19E-04
35	GO:0010480: microsporocyte differentiation	6.19E-04
36	GO:0042759: long-chain fatty acid biosynthetic process	6.19E-04
37	GO:0042371: vitamin K biosynthetic process	6.19E-04
38	GO:0043686: co-translational protein modification	6.19E-04
39	GO:0035987: endodermal cell differentiation	6.19E-04
40	GO:0043007: maintenance of rDNA	6.19E-04
41	GO:1902458: positive regulation of stomatal opening	6.19E-04
42	GO:0015904: tetracycline transport	6.19E-04
43	GO:0048437: floral organ development	7.04E-04
44	GO:0009742: brassinosteroid mediated signaling pathway	8.01E-04
45	GO:2000070: regulation of response to water deprivation	8.76E-04
46	GO:0010497: plasmodesmata-mediated intercellular transport	1.06E-03
47	GO:0006662: glycerol ether metabolic process	1.16E-03
48	GO:0010305: leaf vascular tissue pattern formation	1.16E-03
49	GO:0010182: sugar mediated signaling pathway	1.16E-03
50	GO:2000123: positive regulation of stomatal complex development	1.33E-03
51	GO:0052541: plant-type cell wall cellulose metabolic process	1.33E-03
52	GO:0019388: galactose catabolic process	1.33E-03
53	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.33E-03
54	GO:0071497: cellular response to freezing	1.33E-03
55	GO:0071668: plant-type cell wall assembly	1.33E-03
56	GO:1904143: positive regulation of carotenoid biosynthetic process	1.33E-03
57	GO:0006423: cysteinyl-tRNA aminoacylation	1.33E-03
58	GO:0001682: tRNA 5'-leader removal	1.33E-03
59	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.33E-03
60	GO:0006568: tryptophan metabolic process	1.33E-03
61	GO:0009790: embryo development	1.41E-03
62	GO:0031425: chloroplast RNA processing	1.51E-03
63	GO:0040008: regulation of growth	1.74E-03
64	GO:0009451: RNA modification	1.97E-03
65	GO:0009773: photosynthetic electron transport in photosystem I	2.04E-03
66	GO:0033591: response to L-ascorbic acid	2.19E-03
67	GO:0090708: specification of plant organ axis polarity	2.19E-03
68	GO:0006954: inflammatory response	2.19E-03
69	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	2.19E-03
70	GO:0010027: thylakoid membrane organization	2.45E-03
71	GO:0048367: shoot system development	2.63E-03
72	GO:0010588: cotyledon vascular tissue pattern formation	2.66E-03
73	GO:2000012: regulation of auxin polar transport	2.66E-03
74	GO:0006006: glucose metabolic process	2.66E-03
75	GO:0009102: biotin biosynthetic process	3.19E-03
76	GO:1901000: regulation of response to salt stress	3.19E-03
77	GO:0009647: skotomorphogenesis	3.19E-03
78	GO:0010731: protein glutathionylation	3.19E-03
79	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.19E-03
80	GO:0009590: detection of gravity	3.19E-03
81	GO:0043572: plastid fission	3.19E-03
82	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	3.19E-03
83	GO:0016556: mRNA modification	3.19E-03
84	GO:0010071: root meristem specification	3.19E-03
85	GO:0007231: osmosensory signaling pathway	3.19E-03
86	GO:0070588: calcium ion transmembrane transport	3.37E-03
87	GO:0016042: lipid catabolic process	3.42E-03
88	GO:0010025: wax biosynthetic process	3.76E-03
89	GO:0006071: glycerol metabolic process	3.76E-03
90	GO:0009416: response to light stimulus	3.78E-03
91	GO:0042274: ribosomal small subunit biogenesis	4.30E-03
92	GO:0030104: water homeostasis	4.30E-03
93	GO:0033500: carbohydrate homeostasis	4.30E-03
94	GO:2000038: regulation of stomatal complex development	4.30E-03
95	GO:0022622: root system development	4.30E-03
96	GO:0006221: pyrimidine nucleotide biosynthetic process	4.30E-03
97	GO:0006808: regulation of nitrogen utilization	4.30E-03
98	GO:1901141: regulation of lignin biosynthetic process	4.30E-03
99	GO:0010109: regulation of photosynthesis	4.30E-03
100	GO:0034599: cellular response to oxidative stress	4.94E-03
101	GO:0010375: stomatal complex patterning	5.52E-03
102	GO:0032543: mitochondrial translation	5.52E-03
103	GO:0010236: plastoquinone biosynthetic process	5.52E-03
104	GO:0045038: protein import into chloroplast thylakoid membrane	5.52E-03
105	GO:0031365: N-terminal protein amino acid modification	5.52E-03
106	GO:0016123: xanthophyll biosynthetic process	5.52E-03
107	GO:0006631: fatty acid metabolic process	5.82E-03
108	GO:0009686: gibberellin biosynthetic process	6.07E-03
109	GO:0009640: photomorphogenesis	6.46E-03
110	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.85E-03
111	GO:0009959: negative gravitropism	6.85E-03
112	GO:0042793: transcription from plastid promoter	6.85E-03
113	GO:0016554: cytidine to uridine editing	6.85E-03
114	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	6.85E-03
115	GO:0033365: protein localization to organelle	6.85E-03
116	GO:0032973: amino acid export	6.85E-03
117	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.85E-03
118	GO:0000741: karyogamy	6.85E-03
119	GO:0010405: arabinogalactan protein metabolic process	6.85E-03
120	GO:0080022: primary root development	7.76E-03
121	GO:0008033: tRNA processing	7.76E-03
122	GO:0010087: phloem or xylem histogenesis	7.76E-03
123	GO:2000067: regulation of root morphogenesis	8.28E-03
124	GO:0006458: 'de novo' protein folding	8.28E-03
125	GO:0017148: negative regulation of translation	8.28E-03
126	GO:0048280: vesicle fusion with Golgi apparatus	8.28E-03
127	GO:0042026: protein refolding	8.28E-03
128	GO:0030488: tRNA methylation	8.28E-03
129	GO:2000033: regulation of seed dormancy process	8.28E-03
130	GO:0080086: stamen filament development	8.28E-03
131	GO:0009958: positive gravitropism	8.37E-03
132	GO:0010197: polar nucleus fusion	8.37E-03
133	GO:0009741: response to brassinosteroid	8.37E-03
134	GO:0009733: response to auxin	8.71E-03
135	GO:0009646: response to absence of light	9.01E-03
136	GO:0009793: embryo development ending in seed dormancy	9.02E-03
137	GO:0019252: starch biosynthetic process	9.68E-03
138	GO:0048528: post-embryonic root development	9.81E-03
139	GO:0009772: photosynthetic electron transport in photosystem II	9.81E-03
140	GO:0043090: amino acid import	9.81E-03
141	GO:0010444: guard mother cell differentiation	9.81E-03
142	GO:0032880: regulation of protein localization	9.81E-03
143	GO:0010161: red light signaling pathway	9.81E-03
144	GO:0032502: developmental process	1.11E-02
145	GO:0001522: pseudouridine synthesis	1.14E-02
146	GO:0005978: glycogen biosynthetic process	1.14E-02
147	GO:0006605: protein targeting	1.14E-02
148	GO:0009642: response to light intensity	1.14E-02
149	GO:0010078: maintenance of root meristem identity	1.14E-02
150	GO:0046620: regulation of organ growth	1.14E-02
151	GO:0006353: DNA-templated transcription, termination	1.14E-02
152	GO:0070413: trehalose metabolism in response to stress	1.14E-02
153	GO:0055075: potassium ion homeostasis	1.14E-02
154	GO:0000105: histidine biosynthetic process	1.14E-02
155	GO:0009231: riboflavin biosynthetic process	1.14E-02
156	GO:1901657: glycosyl compound metabolic process	1.18E-02
157	GO:0006397: mRNA processing	1.28E-02
158	GO:0010099: regulation of photomorphogenesis	1.32E-02
159	GO:0015996: chlorophyll catabolic process	1.32E-02
160	GO:0007186: G-protein coupled receptor signaling pathway	1.32E-02
161	GO:0010100: negative regulation of photomorphogenesis	1.32E-02
162	GO:0032544: plastid translation	1.32E-02
163	GO:0009657: plastid organization	1.32E-02
164	GO:0043562: cellular response to nitrogen levels	1.32E-02
165	GO:0046685: response to arsenic-containing substance	1.50E-02
166	GO:0080144: amino acid homeostasis	1.50E-02
167	GO:0046916: cellular transition metal ion homeostasis	1.50E-02
168	GO:0006783: heme biosynthetic process	1.50E-02
169	GO:0048507: meristem development	1.50E-02
170	GO:0000902: cell morphogenesis	1.50E-02
171	GO:0009835: fruit ripening	1.50E-02
172	GO:0009638: phototropism	1.68E-02
173	GO:0043067: regulation of programmed cell death	1.68E-02
174	GO:2000280: regulation of root development	1.68E-02
175	GO:0006779: porphyrin-containing compound biosynthetic process	1.68E-02
176	GO:0009098: leucine biosynthetic process	1.68E-02
177	GO:1900865: chloroplast RNA modification	1.68E-02
178	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.68E-02
179	GO:0010162: seed dormancy process	1.88E-02
180	GO:0006896: Golgi to vacuole transport	1.88E-02
181	GO:0006782: protoporphyrinogen IX biosynthetic process	1.88E-02
182	GO:0045036: protein targeting to chloroplast	1.88E-02
183	GO:0009641: shade avoidance	1.88E-02
184	GO:0006508: proteolysis	1.89E-02
185	GO:0048366: leaf development	1.91E-02
186	GO:0048481: plant ovule development	1.97E-02
187	GO:0009817: defense response to fungus, incompatible interaction	1.97E-02
188	GO:0009813: flavonoid biosynthetic process	2.07E-02
189	GO:0006816: calcium ion transport	2.08E-02
190	GO:0009073: aromatic amino acid family biosynthetic process	2.08E-02
191	GO:0043085: positive regulation of catalytic activity	2.08E-02
192	GO:0048229: gametophyte development	2.08E-02
193	GO:0009684: indoleacetic acid biosynthetic process	2.08E-02
194	GO:0009734: auxin-activated signaling pathway	2.13E-02
195	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.17E-02
196	GO:0048527: lateral root development	2.28E-02
197	GO:0045037: protein import into chloroplast stroma	2.30E-02
198	GO:0045087: innate immune response	2.51E-02
199	GO:0016051: carbohydrate biosynthetic process	2.51E-02
200	GO:0030048: actin filament-based movement	2.52E-02
201	GO:0010628: positive regulation of gene expression	2.52E-02
202	GO:0010102: lateral root morphogenesis	2.52E-02
203	GO:0009691: cytokinin biosynthetic process	2.52E-02
204	GO:0050826: response to freezing	2.52E-02
205	GO:0009718: anthocyanin-containing compound biosynthetic process	2.52E-02
206	GO:0010075: regulation of meristem growth	2.52E-02
207	GO:0006633: fatty acid biosynthetic process	2.64E-02
208	GO:0045454: cell redox homeostasis	2.70E-02
209	GO:0048467: gynoecium development	2.74E-02
210	GO:0010207: photosystem II assembly	2.74E-02
211	GO:0009266: response to temperature stimulus	2.74E-02
212	GO:0009934: regulation of meristem structural organization	2.74E-02
213	GO:0030001: metal ion transport	2.86E-02
214	GO:0019853: L-ascorbic acid biosynthetic process	2.97E-02
215	GO:0080188: RNA-directed DNA methylation	2.97E-02
216	GO:0010030: positive regulation of seed germination	2.97E-02
217	GO:0000162: tryptophan biosynthetic process	3.21E-02
218	GO:0006833: water transport	3.21E-02
219	GO:0010187: negative regulation of seed germination	3.46E-02
220	GO:0005992: trehalose biosynthetic process	3.46E-02
221	GO:0007166: cell surface receptor signaling pathway	3.51E-02
222	GO:0006629: lipid metabolic process	3.67E-02
223	GO:0051302: regulation of cell division	3.71E-02
224	GO:0010026: trichome differentiation	3.71E-02
225	GO:0006855: drug transmembrane transport	3.77E-02
226	GO:0061077: chaperone-mediated protein folding	3.97E-02
227	GO:0048278: vesicle docking	3.97E-02
228	GO:0048511: rhythmic process	3.97E-02
229	GO:0005975: carbohydrate metabolic process	4.02E-02
230	GO:0030245: cellulose catabolic process	4.23E-02
231	GO:0006730: one-carbon metabolic process	4.23E-02
232	GO:0009693: ethylene biosynthetic process	4.50E-02
233	GO:0006012: galactose metabolic process	4.50E-02
234	GO:0042127: regulation of cell proliferation	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005201: extracellular matrix structural constituent	0.00E+00
2	GO:0004076: biotin synthase activity	0.00E+00
3	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
4	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
5	GO:0090711: FMN hydrolase activity	0.00E+00
6	GO:0010303: limit dextrinase activity	0.00E+00
7	GO:0004823: leucine-tRNA ligase activity	0.00E+00
8	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
9	GO:0047661: amino-acid racemase activity	0.00E+00
10	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
11	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
12	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
13	GO:0051060: pullulanase activity	0.00E+00
14	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
15	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
16	GO:0016630: protochlorophyllide reductase activity	1.65E-05
17	GO:0005504: fatty acid binding	5.47E-05
18	GO:0002161: aminoacyl-tRNA editing activity	5.47E-05
19	GO:0043023: ribosomal large subunit binding	1.15E-04
20	GO:0045430: chalcone isomerase activity	1.96E-04
21	GO:0016279: protein-lysine N-methyltransferase activity	1.96E-04
22	GO:0003723: RNA binding	4.79E-04
23	GO:0050139: nicotinate-N-glucosyltransferase activity	6.19E-04
24	GO:0004425: indole-3-glycerol-phosphate synthase activity	6.19E-04
25	GO:0051777: ent-kaurenoate oxidase activity	6.19E-04
26	GO:0004856: xylulokinase activity	6.19E-04
27	GO:0008184: glycogen phosphorylase activity	6.19E-04
28	GO:0004134: 4-alpha-glucanotransferase activity	6.19E-04
29	GO:0004645: phosphorylase activity	6.19E-04
30	GO:0009374: biotin binding	6.19E-04
31	GO:0019203: carbohydrate phosphatase activity	6.19E-04
32	GO:0050308: sugar-phosphatase activity	6.19E-04
33	GO:0005080: protein kinase C binding	6.19E-04
34	GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity	6.19E-04
35	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	6.19E-04
36	GO:0042586: peptide deformylase activity	6.19E-04
37	GO:0052381: tRNA dimethylallyltransferase activity	6.19E-04
38	GO:0010313: phytochrome binding	6.19E-04
39	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	6.19E-04
40	GO:0004176: ATP-dependent peptidase activity	6.21E-04
41	GO:0047134: protein-disulfide reductase activity	9.60E-04
42	GO:0004812: aminoacyl-tRNA ligase activity	9.60E-04
43	GO:0008173: RNA methyltransferase activity	1.06E-03
44	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.27E-03
45	GO:0004791: thioredoxin-disulfide reductase activity	1.28E-03
46	GO:0004817: cysteine-tRNA ligase activity	1.33E-03
47	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.33E-03
48	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.33E-03
49	GO:0004614: phosphoglucomutase activity	1.33E-03
50	GO:0008493: tetracycline transporter activity	1.33E-03
51	GO:0003852: 2-isopropylmalate synthase activity	1.33E-03
52	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.33E-03
53	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.80E-03
54	GO:0052689: carboxylic ester hydrolase activity	2.04E-03
55	GO:0008237: metallopeptidase activity	2.11E-03
56	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.19E-03
57	GO:0004180: carboxypeptidase activity	2.19E-03
58	GO:0070330: aromatase activity	2.19E-03
59	GO:0017150: tRNA dihydrouridine synthase activity	2.19E-03
60	GO:0003913: DNA photolyase activity	2.19E-03
61	GO:0045174: glutathione dehydrogenase (ascorbate) activity	2.19E-03
62	GO:0004148: dihydrolipoyl dehydrogenase activity	2.19E-03
63	GO:0016805: dipeptidase activity	2.19E-03
64	GO:0005262: calcium channel activity	2.66E-03
65	GO:0008266: poly(U) RNA binding	3.00E-03
66	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	3.19E-03
67	GO:0009041: uridylate kinase activity	3.19E-03
68	GO:0016851: magnesium chelatase activity	3.19E-03
69	GO:0005528: FK506 binding	4.18E-03
70	GO:0004519: endonuclease activity	4.28E-03
71	GO:0004659: prenyltransferase activity	4.30E-03
72	GO:0003959: NADPH dehydrogenase activity	5.52E-03
73	GO:0016846: carbon-sulfur lyase activity	5.52E-03
74	GO:0018685: alkane 1-monooxygenase activity	5.52E-03
75	GO:0016773: phosphotransferase activity, alcohol group as acceptor	5.52E-03
76	GO:0003989: acetyl-CoA carboxylase activity	5.52E-03
77	GO:0003727: single-stranded RNA binding	6.61E-03
78	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.85E-03
79	GO:0004526: ribonuclease P activity	6.85E-03
80	GO:0004556: alpha-amylase activity	6.85E-03
81	GO:0016208: AMP binding	6.85E-03
82	GO:2001070: starch binding	6.85E-03
83	GO:0043621: protein self-association	7.15E-03
84	GO:0008195: phosphatidate phosphatase activity	8.28E-03
85	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	8.28E-03
86	GO:0080019: fatty-acyl-CoA reductase (alcohol-forming) activity	8.28E-03
87	GO:0042802: identical protein binding	1.11E-02
88	GO:0005525: GTP binding	1.11E-02
89	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	1.14E-02
90	GO:0004033: aldo-keto reductase (NADP) activity	1.14E-02
91	GO:0046914: transition metal ion binding	1.32E-02
92	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.50E-02
93	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.50E-02
94	GO:0015035: protein disulfide oxidoreductase activity	1.54E-02
95	GO:0016788: hydrolase activity, acting on ester bonds	1.54E-02
96	GO:0016787: hydrolase activity	1.69E-02
97	GO:0102483: scopolin beta-glucosidase activity	1.78E-02
98	GO:0008047: enzyme activator activity	1.88E-02
99	GO:0015020: glucuronosyltransferase activity	1.88E-02
100	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.97E-02
101	GO:0015238: drug transmembrane transporter activity	2.07E-02
102	GO:0008559: xenobiotic-transporting ATPase activity	2.08E-02
103	GO:0044183: protein binding involved in protein folding	2.08E-02
104	GO:0004222: metalloendopeptidase activity	2.18E-02
105	GO:0030170: pyridoxal phosphate binding	2.26E-02
106	GO:0000049: tRNA binding	2.30E-02
107	GO:0009982: pseudouridine synthase activity	2.52E-02
108	GO:0015266: protein channel activity	2.52E-02
109	GO:0004089: carbonate dehydratase activity	2.52E-02
110	GO:0031072: heat shock protein binding	2.52E-02
111	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.72E-02
112	GO:0003774: motor activity	2.74E-02
113	GO:0008083: growth factor activity	2.74E-02
114	GO:0008422: beta-glucosidase activity	2.74E-02
115	GO:0000149: SNARE binding	2.74E-02
116	GO:0008146: sulfotransferase activity	2.97E-02
117	GO:0005484: SNAP receptor activity	3.23E-02
118	GO:0005524: ATP binding	3.37E-02
119	GO:0035091: phosphatidylinositol binding	3.49E-02
120	GO:0005198: structural molecule activity	3.63E-02
121	GO:0003924: GTPase activity	3.67E-02
122	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.77E-02
123	GO:0033612: receptor serine/threonine kinase binding	3.97E-02
124	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.23E-02
125	GO:0016298: lipase activity	4.49E-02
126	GO:0008810: cellulase activity	4.50E-02
127	GO:0003777: microtubule motor activity	4.80E-02
128	GO:0015171: amino acid transmembrane transporter activity	4.80E-02
129	GO:0000287: magnesium ion binding	4.96E-02
130	GO:0003824: catalytic activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.95E-26
2	GO:0009570: chloroplast stroma	2.82E-21
3	GO:0009941: chloroplast envelope	2.93E-10
4	GO:0009534: chloroplast thylakoid	9.80E-06
5	GO:0009508: plastid chromosome	1.43E-05
6	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.65E-05
7	GO:0009295: nucleoid	3.12E-05
8	GO:0042646: plastid nucleoid	1.15E-04
9	GO:0042644: chloroplast nucleoid	1.27E-03
10	GO:0031357: integral component of chloroplast inner membrane	1.33E-03
11	GO:0009536: plastid	1.60E-03
12	GO:0010319: stromule	2.11E-03
13	GO:0009528: plastid inner membrane	2.19E-03
14	GO:0010007: magnesium chelatase complex	2.19E-03
15	GO:0009317: acetyl-CoA carboxylase complex	2.19E-03
16	GO:0030529: intracellular ribonucleoprotein complex	2.45E-03
17	GO:0009706: chloroplast inner membrane	3.33E-03
18	GO:0009527: plastid outer membrane	4.30E-03
19	GO:0009532: plastid stroma	5.08E-03
20	GO:0031969: chloroplast membrane	6.00E-03
21	GO:0009535: chloroplast thylakoid membrane	8.27E-03
22	GO:0005655: nucleolar ribonuclease P complex	8.28E-03
23	GO:0048226: Casparian strip	1.14E-02
24	GO:0012507: ER to Golgi transport vesicle membrane	1.14E-02
25	GO:0009501: amyloplast	1.14E-02
26	GO:0043231: intracellular membrane-bounded organelle	1.40E-02
27	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.50E-02
28	GO:0009579: thylakoid	1.58E-02
29	GO:0000418: DNA-directed RNA polymerase IV complex	1.88E-02
30	GO:0016459: myosin complex	1.88E-02
31	GO:0009707: chloroplast outer membrane	1.97E-02
32	GO:0009543: chloroplast thylakoid lumen	1.98E-02
33	GO:0090404: pollen tube tip	2.08E-02
34	GO:0031201: SNARE complex	2.98E-02
35	GO:0042651: thylakoid membrane	3.71E-02
36	GO:0046658: anchored component of plasma membrane	4.20E-02
37	GO:0015629: actin cytoskeleton	4.50E-02
38	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.78E-02