co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G34250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046865: terpenoid transport	0.00E+00
2	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:1902065: response to L-glutamate	1.37E-04
5	GO:0032491: detection of molecule of fungal origin	1.37E-04
6	GO:0034975: protein folding in endoplasmic reticulum	1.37E-04
7	GO:1990641: response to iron ion starvation	1.37E-04
8	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.37E-04
9	GO:0000266: mitochondrial fission	2.75E-04
10	GO:0002240: response to molecule of oomycetes origin	3.16E-04
11	GO:0009727: detection of ethylene stimulus	3.16E-04
12	GO:0006101: citrate metabolic process	3.16E-04
13	GO:0080183: response to photooxidative stress	3.16E-04
14	GO:0010155: regulation of proton transport	3.16E-04
15	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.16E-04
16	GO:0009812: flavonoid metabolic process	3.16E-04
17	GO:0002237: response to molecule of bacterial origin	3.55E-04
18	GO:0009901: anther dehiscence	3.99E-04
19	GO:0080168: abscisic acid transport	5.20E-04
20	GO:0006065: UDP-glucuronate biosynthetic process	5.20E-04
21	GO:0015783: GDP-fucose transport	5.20E-04
22	GO:0015692: lead ion transport	5.20E-04
23	GO:0052546: cell wall pectin metabolic process	5.20E-04
24	GO:0009738: abscisic acid-activated signaling pathway	6.33E-04
25	GO:0010731: protein glutathionylation	7.44E-04
26	GO:0071323: cellular response to chitin	7.44E-04
27	GO:0045088: regulation of innate immune response	9.85E-04
28	GO:0022622: root system development	9.85E-04
29	GO:0030041: actin filament polymerization	1.25E-03
30	GO:0006097: glyoxylate cycle	1.25E-03
31	GO:0009229: thiamine diphosphate biosynthetic process	1.25E-03
32	GO:0009247: glycolipid biosynthetic process	1.25E-03
33	GO:0006464: cellular protein modification process	1.41E-03
34	GO:0009228: thiamine biosynthetic process	1.53E-03
35	GO:0033365: protein localization to organelle	1.53E-03
36	GO:0002238: response to molecule of fungal origin	1.53E-03
37	GO:0048317: seed morphogenesis	1.53E-03
38	GO:0031930: mitochondria-nucleus signaling pathway	1.83E-03
39	GO:0045926: negative regulation of growth	1.83E-03
40	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.83E-03
41	GO:0071470: cellular response to osmotic stress	1.83E-03
42	GO:0007166: cell surface receptor signaling pathway	2.14E-03
43	GO:0010044: response to aluminum ion	2.15E-03
44	GO:0046470: phosphatidylcholine metabolic process	2.15E-03
45	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.49E-03
46	GO:0019375: galactolipid biosynthetic process	2.49E-03
47	GO:0045010: actin nucleation	2.49E-03
48	GO:0006102: isocitrate metabolic process	2.49E-03
49	GO:0010928: regulation of auxin mediated signaling pathway	2.49E-03
50	GO:0045087: innate immune response	2.75E-03
51	GO:0010204: defense response signaling pathway, resistance gene-independent	2.85E-03
52	GO:0010112: regulation of systemic acquired resistance	3.22E-03
53	GO:0015780: nucleotide-sugar transport	3.22E-03
54	GO:0007338: single fertilization	3.22E-03
55	GO:0009086: methionine biosynthetic process	3.60E-03
56	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.60E-03
57	GO:0008202: steroid metabolic process	3.60E-03
58	GO:0006896: Golgi to vacuole transport	4.00E-03
59	GO:0010200: response to chitin	4.30E-03
60	GO:0009089: lysine biosynthetic process via diaminopimelate	4.42E-03
61	GO:0042538: hyperosmotic salinity response	4.43E-03
62	GO:0045037: protein import into chloroplast stroma	4.85E-03
63	GO:2000028: regulation of photoperiodism, flowering	5.30E-03
64	GO:0018107: peptidyl-threonine phosphorylation	5.30E-03
65	GO:0009620: response to fungus	6.17E-03
66	GO:0070588: calcium ion transmembrane transport	6.23E-03
67	GO:0034976: response to endoplasmic reticulum stress	6.71E-03
68	GO:0018105: peptidyl-serine phosphorylation	6.96E-03
69	GO:0009863: salicylic acid mediated signaling pathway	7.22E-03
70	GO:0045333: cellular respiration	7.22E-03
71	GO:0080147: root hair cell development	7.22E-03
72	GO:0009814: defense response, incompatible interaction	8.79E-03
73	GO:0031348: negative regulation of defense response	8.79E-03
74	GO:0071456: cellular response to hypoxia	8.79E-03
75	GO:0042742: defense response to bacterium	9.08E-03
76	GO:0071369: cellular response to ethylene stimulus	9.35E-03
77	GO:0009306: protein secretion	9.92E-03
78	GO:0010584: pollen exine formation	9.92E-03
79	GO:0010150: leaf senescence	1.17E-02
80	GO:0010197: polar nucleus fusion	1.17E-02
81	GO:0009960: endosperm development	1.17E-02
82	GO:0006623: protein targeting to vacuole	1.29E-02
83	GO:0006470: protein dephosphorylation	1.34E-02
84	GO:0071554: cell wall organization or biogenesis	1.36E-02
85	GO:0002229: defense response to oomycetes	1.36E-02
86	GO:0010193: response to ozone	1.36E-02
87	GO:0008380: RNA splicing	1.40E-02
88	GO:0009567: double fertilization forming a zygote and endosperm	1.55E-02
89	GO:0006904: vesicle docking involved in exocytosis	1.62E-02
90	GO:0006952: defense response	1.62E-02
91	GO:0010029: regulation of seed germination	1.83E-02
92	GO:0009607: response to biotic stimulus	1.83E-02
93	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.83E-02
94	GO:0055085: transmembrane transport	1.89E-02
95	GO:0006906: vesicle fusion	1.90E-02
96	GO:0009817: defense response to fungus, incompatible interaction	2.12E-02
97	GO:0008219: cell death	2.12E-02
98	GO:0016192: vesicle-mediated transport	2.37E-02
99	GO:0006099: tricarboxylic acid cycle	2.60E-02
100	GO:0006887: exocytosis	2.84E-02
101	GO:0006897: endocytosis	2.84E-02
102	GO:0042542: response to hydrogen peroxide	2.93E-02
103	GO:0006869: lipid transport	2.96E-02
104	GO:0051707: response to other organism	3.01E-02
105	GO:0006468: protein phosphorylation	3.03E-02
106	GO:0000209: protein polyubiquitination	3.10E-02
107	GO:0008643: carbohydrate transport	3.19E-02
108	GO:0009408: response to heat	3.32E-02
109	GO:0006855: drug transmembrane transport	3.36E-02
110	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.45E-02
111	GO:0000165: MAPK cascade	3.45E-02
112	GO:0031347: regulation of defense response	3.45E-02
113	GO:0006857: oligopeptide transport	3.91E-02
114	GO:0015031: protein transport	4.56E-02
115	GO:0006396: RNA processing	4.88E-02
116	GO:0006351: transcription, DNA-templated	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0050334: thiaminase activity	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.37E-04
5	GO:0046481: digalactosyldiacylglycerol synthase activity	1.37E-04
6	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.37E-04
7	GO:0003994: aconitate hydratase activity	3.16E-04
8	GO:0032934: sterol binding	3.16E-04
9	GO:0005457: GDP-fucose transmembrane transporter activity	5.20E-04
10	GO:0003979: UDP-glucose 6-dehydrogenase activity	5.20E-04
11	GO:0035529: NADH pyrophosphatase activity	7.44E-04
12	GO:0035250: UDP-galactosyltransferase activity	7.44E-04
13	GO:0009916: alternative oxidase activity	9.85E-04
14	GO:0047631: ADP-ribose diphosphatase activity	1.25E-03
15	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.50E-03
16	GO:0000210: NAD+ diphosphatase activity	1.53E-03
17	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.65E-03
18	GO:0004656: procollagen-proline 4-dioxygenase activity	1.83E-03
19	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.45E-03
20	GO:0004708: MAP kinase kinase activity	2.49E-03
21	GO:0005524: ATP binding	2.83E-03
22	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.85E-03
23	GO:0008142: oxysterol binding	2.85E-03
24	GO:0004630: phospholipase D activity	2.85E-03
25	GO:0051287: NAD binding	4.27E-03
26	GO:0016301: kinase activity	4.42E-03
27	GO:0015198: oligopeptide transporter activity	4.85E-03
28	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.30E-03
29	GO:0005388: calcium-transporting ATPase activity	5.30E-03
30	GO:0008061: chitin binding	6.23E-03
31	GO:0016874: ligase activity	6.36E-03
32	GO:0015035: protein disulfide oxidoreductase activity	6.96E-03
33	GO:0031418: L-ascorbic acid binding	7.22E-03
34	GO:0046872: metal ion binding	7.47E-03
35	GO:0005509: calcium ion binding	8.04E-03
36	GO:0004707: MAP kinase activity	8.26E-03
37	GO:0005515: protein binding	8.39E-03
38	GO:0008810: cellulase activity	9.35E-03
39	GO:0003756: protein disulfide isomerase activity	9.92E-03
40	GO:0015297: antiporter activity	1.12E-02
41	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.49E-02
42	GO:0008483: transaminase activity	1.62E-02
43	GO:0016413: O-acetyltransferase activity	1.69E-02
44	GO:0008375: acetylglucosaminyltransferase activity	1.90E-02
45	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.90E-02
46	GO:0030247: polysaccharide binding	1.98E-02
47	GO:0004683: calmodulin-dependent protein kinase activity	1.98E-02
48	GO:0005516: calmodulin binding	2.35E-02
49	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.51E-02
50	GO:0000149: SNARE binding	2.68E-02
51	GO:0051539: 4 iron, 4 sulfur cluster binding	2.76E-02
52	GO:0016787: hydrolase activity	2.84E-02
53	GO:0004722: protein serine/threonine phosphatase activity	2.96E-02
54	GO:0005484: SNAP receptor activity	3.01E-02
55	GO:0051537: 2 iron, 2 sulfur cluster binding	3.19E-02
56	GO:0043565: sequence-specific DNA binding	3.81E-02
57	GO:0022857: transmembrane transporter activity	4.58E-02
58	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.65E-02
59	GO:0003779: actin binding	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0005789: endoplasmic reticulum membrane	3.35E-04
2	GO:0005783: endoplasmic reticulum	3.87E-04
3	GO:0016021: integral component of membrane	3.99E-04
4	GO:0000139: Golgi membrane	1.03E-03
5	GO:0005886: plasma membrane	2.65E-03
6	GO:0031902: late endosome membrane	3.26E-03
7	GO:0030665: clathrin-coated vesicle membrane	3.60E-03
8	GO:0017119: Golgi transport complex	4.00E-03
9	GO:0070469: respiratory chain	7.73E-03
10	GO:0005741: mitochondrial outer membrane	8.26E-03
11	GO:0009524: phragmoplast	8.92E-03
12	GO:0030136: clathrin-coated vesicle	1.05E-02
13	GO:0016020: membrane	1.10E-02
14	GO:0005794: Golgi apparatus	1.27E-02
15	GO:0016592: mediator complex	1.42E-02
16	GO:0005788: endoplasmic reticulum lumen	1.83E-02
17	GO:0000151: ubiquitin ligase complex	2.12E-02
18	GO:0009707: chloroplast outer membrane	2.12E-02
19	GO:0000325: plant-type vacuole	2.36E-02
20	GO:0005618: cell wall	2.50E-02
21	GO:0031201: SNARE complex	2.84E-02
22	GO:0009506: plasmodesma	3.52E-02
23	GO:0043231: intracellular membrane-bounded organelle	3.66E-02
24	GO:0005681: spliceosomal complex	4.19E-02
25	GO:0016607: nuclear speck	4.29E-02
26	GO:0010008: endosome membrane	4.29E-02
27	GO:0005887: integral component of plasma membrane	4.50E-02
28	GO:0009706: chloroplast inner membrane	4.78E-02