Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G33820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070979: protein K11-linked ubiquitination0.00E+00
2GO:0044154: histone H3-K14 acetylation0.00E+00
3GO:0045176: apical protein localization0.00E+00
4GO:0010081: regulation of inflorescence meristem growth0.00E+00
5GO:0071000: response to magnetism0.00E+00
6GO:0009583: detection of light stimulus0.00E+00
7GO:0000372: Group I intron splicing0.00E+00
8GO:0043972: histone H3-K23 acetylation0.00E+00
9GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
10GO:0033528: S-methylmethionine cycle0.00E+00
11GO:1905177: tracheary element differentiation0.00E+00
12GO:0006114: glycerol biosynthetic process0.00E+00
13GO:0006399: tRNA metabolic process0.00E+00
14GO:0000373: Group II intron splicing1.81E-06
15GO:0009793: embryo development ending in seed dormancy1.32E-04
16GO:0009658: chloroplast organization1.81E-04
17GO:0010207: photosystem II assembly2.51E-04
18GO:0010158: abaxial cell fate specification2.52E-04
19GO:0034757: negative regulation of iron ion transport5.57E-04
20GO:0006419: alanyl-tRNA aminoacylation5.57E-04
21GO:0009090: homoserine biosynthetic process5.57E-04
22GO:0048657: anther wall tapetum cell differentiation5.57E-04
23GO:0043971: histone H3-K18 acetylation5.57E-04
24GO:0000012: single strand break repair5.57E-04
25GO:0043266: regulation of potassium ion transport5.57E-04
26GO:0010080: regulation of floral meristem growth5.57E-04
27GO:1902025: nitrate import5.57E-04
28GO:0042547: cell wall modification involved in multidimensional cell growth5.57E-04
29GO:0072387: flavin adenine dinucleotide metabolic process5.57E-04
30GO:0043087: regulation of GTPase activity5.57E-04
31GO:2000021: regulation of ion homeostasis5.57E-04
32GO:0043609: regulation of carbon utilization5.57E-04
33GO:0006436: tryptophanyl-tRNA aminoacylation5.57E-04
34GO:0090548: response to nitrate starvation5.57E-04
35GO:0051510: regulation of unidimensional cell growth6.04E-04
36GO:0048564: photosystem I assembly7.52E-04
37GO:0006353: DNA-templated transcription, termination7.52E-04
38GO:0071482: cellular response to light stimulus9.15E-04
39GO:0009657: plastid organization9.15E-04
40GO:0010343: singlet oxygen-mediated programmed cell death1.20E-03
41GO:1901529: positive regulation of anion channel activity1.20E-03
42GO:0060359: response to ammonium ion1.20E-03
43GO:0048255: mRNA stabilization1.20E-03
44GO:0010617: circadian regulation of calcium ion oscillation1.20E-03
45GO:0010271: regulation of chlorophyll catabolic process1.20E-03
46GO:0099402: plant organ development1.20E-03
47GO:0006435: threonyl-tRNA aminoacylation1.20E-03
48GO:0001736: establishment of planar polarity1.20E-03
49GO:0009086: methionine biosynthetic process1.29E-03
50GO:0006415: translational termination1.74E-03
51GO:0080117: secondary growth1.97E-03
52GO:1902448: positive regulation of shade avoidance1.97E-03
53GO:0006000: fructose metabolic process1.97E-03
54GO:0031145: anaphase-promoting complex-dependent catabolic process1.97E-03
55GO:0010623: programmed cell death involved in cell development1.97E-03
56GO:0010022: meristem determinacy1.97E-03
57GO:1901672: positive regulation of systemic acquired resistance1.97E-03
58GO:0006696: ergosterol biosynthetic process1.97E-03
59GO:0043157: response to cation stress1.97E-03
60GO:0030029: actin filament-based process1.97E-03
61GO:0010582: floral meristem determinacy2.00E-03
62GO:0006094: gluconeogenesis2.27E-03
63GO:0030071: regulation of mitotic metaphase/anaphase transition2.86E-03
64GO:0051639: actin filament network formation2.86E-03
65GO:0034059: response to anoxia2.86E-03
66GO:0010239: chloroplast mRNA processing2.86E-03
67GO:0009800: cinnamic acid biosynthetic process2.86E-03
68GO:1901332: negative regulation of lateral root development2.86E-03
69GO:0042989: sequestering of actin monomers2.86E-03
70GO:2001141: regulation of RNA biosynthetic process2.86E-03
71GO:0046836: glycolipid transport2.86E-03
72GO:0009067: aspartate family amino acid biosynthetic process2.86E-03
73GO:0051513: regulation of monopolar cell growth2.86E-03
74GO:0090351: seedling development2.88E-03
75GO:0005992: trehalose biosynthetic process3.56E-03
76GO:0051781: positive regulation of cell division3.85E-03
77GO:0051764: actin crosslink formation3.85E-03
78GO:0048442: sepal development3.85E-03
79GO:0051322: anaphase3.85E-03
80GO:0006661: phosphatidylinositol biosynthetic process3.85E-03
81GO:0015846: polyamine transport3.85E-03
82GO:0010508: positive regulation of autophagy3.85E-03
83GO:1902347: response to strigolactone3.85E-03
84GO:0008295: spermidine biosynthetic process3.85E-03
85GO:0016123: xanthophyll biosynthetic process4.94E-03
86GO:0080110: sporopollenin biosynthetic process4.94E-03
87GO:0032876: negative regulation of DNA endoreduplication4.94E-03
88GO:0006465: signal peptide processing4.94E-03
89GO:0030041: actin filament polymerization4.94E-03
90GO:0010117: photoprotection4.94E-03
91GO:0046283: anthocyanin-containing compound metabolic process4.94E-03
92GO:0031365: N-terminal protein amino acid modification4.94E-03
93GO:1902183: regulation of shoot apical meristem development4.94E-03
94GO:0010584: pollen exine formation5.63E-03
95GO:0016117: carotenoid biosynthetic process6.11E-03
96GO:0009789: positive regulation of abscisic acid-activated signaling pathway6.11E-03
97GO:0009959: negative gravitropism6.12E-03
98GO:0060918: auxin transport6.12E-03
99GO:0048831: regulation of shoot system development6.12E-03
100GO:0010190: cytochrome b6f complex assembly6.12E-03
101GO:0009920: cell plate formation involved in plant-type cell wall biogenesis6.12E-03
102GO:1901371: regulation of leaf morphogenesis6.12E-03
103GO:0006559: L-phenylalanine catabolic process6.12E-03
104GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione6.12E-03
105GO:0048827: phyllome development6.12E-03
106GO:0009451: RNA modification6.25E-03
107GO:0010087: phloem or xylem histogenesis6.61E-03
108GO:0010268: brassinosteroid homeostasis7.13E-03
109GO:0009958: positive gravitropism7.13E-03
110GO:0045489: pectin biosynthetic process7.13E-03
111GO:0046323: glucose import7.13E-03
112GO:0010310: regulation of hydrogen peroxide metabolic process7.40E-03
113GO:0042372: phylloquinone biosynthetic process7.40E-03
114GO:0010076: maintenance of floral meristem identity7.40E-03
115GO:0010244: response to low fluence blue light stimulus by blue low-fluence system7.40E-03
116GO:0048509: regulation of meristem development7.40E-03
117GO:0009088: threonine biosynthetic process7.40E-03
118GO:0007059: chromosome segregation7.67E-03
119GO:0009416: response to light stimulus8.18E-03
120GO:0006955: immune response8.76E-03
121GO:0010098: suspensor development8.76E-03
122GO:0010050: vegetative phase change8.76E-03
123GO:0006400: tRNA modification8.76E-03
124GO:0016132: brassinosteroid biosynthetic process8.82E-03
125GO:0007264: small GTPase mediated signal transduction9.43E-03
126GO:0048316: seed development9.97E-03
127GO:0009850: auxin metabolic process1.02E-02
128GO:0032875: regulation of DNA endoreduplication1.02E-02
129GO:0042255: ribosome assembly1.02E-02
130GO:0070413: trehalose metabolism in response to stress1.02E-02
131GO:0045010: actin nucleation1.02E-02
132GO:0000105: histidine biosynthetic process1.02E-02
133GO:0016125: sterol metabolic process1.07E-02
134GO:0006002: fructose 6-phosphate metabolic process1.17E-02
135GO:0022900: electron transport chain1.17E-02
136GO:0009827: plant-type cell wall modification1.17E-02
137GO:0032544: plastid translation1.17E-02
138GO:0044030: regulation of DNA methylation1.17E-02
139GO:0009911: positive regulation of flower development1.28E-02
140GO:0090305: nucleic acid phosphodiester bond hydrolysis1.33E-02
141GO:0010206: photosystem II repair1.33E-02
142GO:0006098: pentose-phosphate shunt1.33E-02
143GO:2000024: regulation of leaf development1.33E-02
144GO:0010029: regulation of seed germination1.36E-02
145GO:0009638: phototropism1.50E-02
146GO:0016571: histone methylation1.50E-02
147GO:0010018: far-red light signaling pathway1.50E-02
148GO:0016573: histone acetylation1.50E-02
149GO:1900426: positive regulation of defense response to bacterium1.50E-02
150GO:0006259: DNA metabolic process1.68E-02
151GO:0009299: mRNA transcription1.68E-02
152GO:0006535: cysteine biosynthetic process from serine1.68E-02
153GO:0048441: petal development1.68E-02
154GO:0018298: protein-chromophore linkage1.68E-02
155GO:0048829: root cap development1.68E-02
156GO:0006949: syncytium formation1.68E-02
157GO:0000160: phosphorelay signal transduction system1.76E-02
158GO:0006265: DNA topological change1.86E-02
159GO:0009089: lysine biosynthetic process via diaminopimelate1.86E-02
160GO:0006352: DNA-templated transcription, initiation1.86E-02
161GO:0048765: root hair cell differentiation1.86E-02
162GO:0045037: protein import into chloroplast stroma2.05E-02
163GO:0009637: response to blue light2.13E-02
164GO:0009767: photosynthetic electron transport chain2.24E-02
165GO:0009785: blue light signaling pathway2.24E-02
166GO:0010229: inflorescence development2.24E-02
167GO:0030036: actin cytoskeleton organization2.24E-02
168GO:0010075: regulation of meristem growth2.24E-02
169GO:0009725: response to hormone2.24E-02
170GO:0006302: double-strand break repair2.44E-02
171GO:0048440: carpel development2.44E-02
172GO:0010020: chloroplast fission2.44E-02
173GO:0010540: basipetal auxin transport2.44E-02
174GO:0009266: response to temperature stimulus2.44E-02
175GO:0080188: RNA-directed DNA methylation2.65E-02
176GO:0006508: proteolysis2.72E-02
177GO:0008283: cell proliferation2.75E-02
178GO:0010114: response to red light2.75E-02
179GO:0042753: positive regulation of circadian rhythm2.86E-02
180GO:0042546: cell wall biogenesis2.86E-02
181GO:0006863: purine nucleobase transport2.86E-02
182GO:0019344: cysteine biosynthetic process3.08E-02
183GO:0009944: polarity specification of adaxial/abaxial axis3.08E-02
184GO:0030150: protein import into mitochondrial matrix3.08E-02
185GO:0006338: chromatin remodeling3.08E-02
186GO:0051017: actin filament bundle assembly3.08E-02
187GO:0007010: cytoskeleton organization3.08E-02
188GO:0006289: nucleotide-excision repair3.08E-02
189GO:2000377: regulation of reactive oxygen species metabolic process3.08E-02
190GO:0009636: response to toxic substance3.09E-02
191GO:0006418: tRNA aminoacylation for protein translation3.31E-02
192GO:0010073: meristem maintenance3.31E-02
193GO:0006825: copper ion transport3.31E-02
194GO:0009664: plant-type cell wall organization3.45E-02
195GO:0003333: amino acid transmembrane transport3.54E-02
196GO:0016998: cell wall macromolecule catabolic process3.54E-02
197GO:0015992: proton transport3.54E-02
198GO:0048511: rhythmic process3.54E-02
199GO:0009736: cytokinin-activated signaling pathway3.70E-02
200GO:0006364: rRNA processing3.70E-02
201GO:0009814: defense response, incompatible interaction3.78E-02
202GO:0016226: iron-sulfur cluster assembly3.78E-02
203GO:0035428: hexose transmembrane transport3.78E-02
204GO:0006730: one-carbon metabolic process3.78E-02
205GO:0031348: negative regulation of defense response3.78E-02
206GO:0080092: regulation of pollen tube growth3.78E-02
207GO:0051603: proteolysis involved in cellular protein catabolic process3.83E-02
208GO:0009826: unidimensional cell growth3.99E-02
209GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.02E-02
210GO:0071215: cellular response to abscisic acid stimulus4.02E-02
211GO:0048443: stamen development4.26E-02
212GO:0006284: base-excision repair4.26E-02
213GO:0019722: calcium-mediated signaling4.26E-02
214GO:0010089: xylem development4.26E-02
215GO:0070417: cellular response to cold4.51E-02
216GO:0006970: response to osmotic stress4.57E-02
217GO:0008033: tRNA processing4.77E-02
218GO:0010118: stomatal movement4.77E-02
RankGO TermAdjusted P value
1GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
2GO:0043136: glycerol-3-phosphatase activity0.00E+00
3GO:0000121: glycerol-1-phosphatase activity0.00E+00
4GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity0.00E+00
5GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
6GO:0019808: polyamine binding0.00E+00
7GO:0050613: delta14-sterol reductase activity0.00E+00
8GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
9GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
10GO:0046905: phytoene synthase activity0.00E+00
11GO:0005227: calcium activated cation channel activity5.57E-04
12GO:0042834: peptidoglycan binding5.57E-04
13GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity5.57E-04
14GO:0004813: alanine-tRNA ligase activity5.57E-04
15GO:0004008: copper-exporting ATPase activity5.57E-04
16GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity5.57E-04
17GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.57E-04
18GO:0051996: squalene synthase activity5.57E-04
19GO:0004830: tryptophan-tRNA ligase activity5.57E-04
20GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity5.57E-04
21GO:0003879: ATP phosphoribosyltransferase activity5.57E-04
22GO:0043022: ribosome binding7.52E-04
23GO:0003747: translation release factor activity1.09E-03
24GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity1.20E-03
25GO:0004047: aminomethyltransferase activity1.20E-03
26GO:0004766: spermidine synthase activity1.20E-03
27GO:0004829: threonine-tRNA ligase activity1.20E-03
28GO:0008805: carbon-monoxide oxygenase activity1.20E-03
29GO:0004412: homoserine dehydrogenase activity1.20E-03
30GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.20E-03
31GO:0050736: O-malonyltransferase activity1.20E-03
32GO:0009884: cytokinin receptor activity1.20E-03
33GO:0048531: beta-1,3-galactosyltransferase activity1.20E-03
34GO:0050017: L-3-cyanoalanine synthase activity1.20E-03
35GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.20E-03
36GO:0043425: bHLH transcription factor binding1.20E-03
37GO:0004805: trehalose-phosphatase activity1.51E-03
38GO:0005089: Rho guanyl-nucleotide exchange factor activity1.74E-03
39GO:0008430: selenium binding1.97E-03
40GO:0032549: ribonucleoside binding1.97E-03
41GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.97E-03
42GO:0045548: phenylalanine ammonia-lyase activity1.97E-03
43GO:0003913: DNA photolyase activity1.97E-03
44GO:0004148: dihydrolipoyl dehydrogenase activity1.97E-03
45GO:0016805: dipeptidase activity1.97E-03
46GO:0005034: osmosensor activity1.97E-03
47GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.56E-03
48GO:0001872: (1->3)-beta-D-glucan binding2.86E-03
49GO:0017089: glycolipid transporter activity2.86E-03
50GO:0004072: aspartate kinase activity2.86E-03
51GO:0005354: galactose transmembrane transporter activity2.86E-03
52GO:0009678: hydrogen-translocating pyrophosphatase activity2.86E-03
53GO:0016149: translation release factor activity, codon specific2.86E-03
54GO:0017172: cysteine dioxygenase activity2.86E-03
55GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.86E-03
56GO:0009882: blue light photoreceptor activity2.86E-03
57GO:0004300: enoyl-CoA hydratase activity2.86E-03
58GO:0004222: metalloendopeptidase activity3.18E-03
59GO:0010011: auxin binding3.85E-03
60GO:0051861: glycolipid binding3.85E-03
61GO:0070628: proteasome binding3.85E-03
62GO:0016987: sigma factor activity3.85E-03
63GO:0010328: auxin influx transmembrane transporter activity3.85E-03
64GO:0010385: double-stranded methylated DNA binding3.85E-03
65GO:0042277: peptide binding3.85E-03
66GO:0001053: plastid sigma factor activity3.85E-03
67GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.88E-03
68GO:0008725: DNA-3-methyladenine glycosylase activity4.94E-03
69GO:0003785: actin monomer binding4.94E-03
70GO:0005471: ATP:ADP antiporter activity4.94E-03
71GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.94E-03
72GO:0046872: metal ion binding5.12E-03
73GO:0030570: pectate lyase activity5.18E-03
74GO:0004332: fructose-bisphosphate aldolase activity6.12E-03
75GO:0031593: polyubiquitin binding6.12E-03
76GO:0004462: lactoylglutathione lyase activity6.12E-03
77GO:2001070: starch binding6.12E-03
78GO:0004124: cysteine synthase activity7.40E-03
79GO:0004656: procollagen-proline 4-dioxygenase activity7.40E-03
80GO:0019900: kinase binding7.40E-03
81GO:0005355: glucose transmembrane transporter activity7.67E-03
82GO:0003690: double-stranded DNA binding8.07E-03
83GO:0008235: metalloexopeptidase activity8.76E-03
84GO:0004427: inorganic diphosphatase activity8.76E-03
85GO:0009881: photoreceptor activity8.76E-03
86GO:0003924: GTPase activity8.96E-03
87GO:0004518: nuclease activity9.43E-03
88GO:0005375: copper ion transmembrane transporter activity1.17E-02
89GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.17E-02
90GO:0016597: amino acid binding1.21E-02
91GO:0071949: FAD binding1.33E-02
92GO:0019843: rRNA binding1.62E-02
93GO:0004673: protein histidine kinase activity1.68E-02
94GO:0005096: GTPase activator activity1.76E-02
95GO:0001054: RNA polymerase I activity1.86E-02
96GO:0004177: aminopeptidase activity1.86E-02
97GO:0015144: carbohydrate transmembrane transporter activity2.03E-02
98GO:0000049: tRNA binding2.05E-02
99GO:0005525: GTP binding2.13E-02
100GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.22E-02
101GO:0008081: phosphoric diester hydrolase activity2.24E-02
102GO:0015266: protein channel activity2.24E-02
103GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.24E-02
104GO:0000155: phosphorelay sensor kinase activity2.24E-02
105GO:0005351: sugar:proton symporter activity2.36E-02
106GO:0004185: serine-type carboxypeptidase activity2.75E-02
107GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.86E-02
108GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.86E-02
109GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.86E-02
110GO:0043130: ubiquitin binding3.08E-02
111GO:0031418: L-ascorbic acid binding3.08E-02
112GO:0042802: identical protein binding3.28E-02
113GO:0004519: endonuclease activity3.28E-02
114GO:0043424: protein histidine kinase binding3.31E-02
115GO:0005345: purine nucleobase transmembrane transporter activity3.31E-02
116GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.70E-02
117GO:0003727: single-stranded RNA binding4.26E-02
118GO:0004812: aminoacyl-tRNA ligase activity4.51E-02
119GO:0004402: histone acetyltransferase activity4.77E-02
RankGO TermAdjusted P value
1GO:0009537: proplastid0.00E+00
2GO:0042597: periplasmic space0.00E+00
3GO:0035452: extrinsic component of plastid membrane0.00E+00
4GO:0009507: chloroplast8.20E-13
5GO:0046658: anchored component of plasma membrane5.79E-04
6GO:0031225: anchored component of membrane8.36E-04
7GO:0009513: etioplast1.20E-03
8GO:0016604: nuclear body1.29E-03
9GO:0009509: chromoplast1.97E-03
10GO:0016605: PML body1.97E-03
11GO:0009574: preprophase band2.27E-03
12GO:0009570: chloroplast stroma2.61E-03
13GO:0032432: actin filament bundle2.86E-03
14GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)3.85E-03
15GO:0042651: thylakoid membrane3.93E-03
16GO:0009535: chloroplast thylakoid membrane5.36E-03
17GO:0031209: SCAR complex6.12E-03
18GO:0009986: cell surface8.76E-03
19GO:0031305: integral component of mitochondrial inner membrane1.02E-02
20GO:0009501: amyloplast1.02E-02
21GO:0030529: intracellular ribonucleoprotein complex1.28E-02
22GO:0005736: DNA-directed RNA polymerase I complex1.33E-02
23GO:0005680: anaphase-promoting complex1.33E-02
24GO:0016324: apical plasma membrane1.68E-02
25GO:0005886: plasma membrane1.75E-02
26GO:0005884: actin filament1.86E-02
27GO:0000311: plastid large ribosomal subunit2.05E-02
28GO:0005938: cell cortex2.24E-02
29GO:0016602: CCAAT-binding factor complex2.24E-02
30GO:0005578: proteinaceous extracellular matrix2.24E-02
31GO:0030176: integral component of endoplasmic reticulum membrane2.65E-02
32GO:0009532: plastid stroma3.54E-02
33GO:0015629: actin cytoskeleton4.02E-02
34GO:0005744: mitochondrial inner membrane presequence translocase complex4.26E-02
35GO:0005871: kinesin complex4.51E-02
36GO:0009536: plastid4.55E-02
37GO:0009505: plant-type cell wall4.73E-02
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Gene type



Gene DE type