GO Enrichment Analysis of Co-expressed Genes with
AT2G32500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0032544: plastid translation | 3.75E-07 |
| 3 | GO:0042254: ribosome biogenesis | 4.48E-07 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 1.45E-06 |
| 5 | GO:0006412: translation | 5.81E-06 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 9.76E-05 |
| 7 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.76E-05 |
| 8 | GO:0009735: response to cytokinin | 1.13E-04 |
| 9 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.77E-04 |
| 10 | GO:0015979: photosynthesis | 2.40E-04 |
| 11 | GO:0071484: cellular response to light intensity | 4.32E-04 |
| 12 | GO:0051085: chaperone mediated protein folding requiring cofactor | 4.32E-04 |
| 13 | GO:0006241: CTP biosynthetic process | 4.32E-04 |
| 14 | GO:0006165: nucleoside diphosphate phosphorylation | 4.32E-04 |
| 15 | GO:0006228: UTP biosynthetic process | 4.32E-04 |
| 16 | GO:0010731: protein glutathionylation | 4.32E-04 |
| 17 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.75E-04 |
| 18 | GO:0006183: GTP biosynthetic process | 5.75E-04 |
| 19 | GO:0045727: positive regulation of translation | 5.75E-04 |
| 20 | GO:0006461: protein complex assembly | 7.29E-04 |
| 21 | GO:0006751: glutathione catabolic process | 8.91E-04 |
| 22 | GO:0006828: manganese ion transport | 8.91E-04 |
| 23 | GO:0010190: cytochrome b6f complex assembly | 8.91E-04 |
| 24 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 8.91E-04 |
| 25 | GO:0042026: protein refolding | 1.06E-03 |
| 26 | GO:0009772: photosynthetic electron transport in photosystem II | 1.24E-03 |
| 27 | GO:0009657: plastid organization | 1.63E-03 |
| 28 | GO:0010206: photosystem II repair | 1.83E-03 |
| 29 | GO:0006783: heme biosynthetic process | 1.83E-03 |
| 30 | GO:0006754: ATP biosynthetic process | 1.83E-03 |
| 31 | GO:0006364: rRNA processing | 2.08E-03 |
| 32 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.28E-03 |
| 33 | GO:0006096: glycolytic process | 2.46E-03 |
| 34 | GO:0006816: calcium ion transport | 2.51E-03 |
| 35 | GO:0006415: translational termination | 2.51E-03 |
| 36 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.51E-03 |
| 37 | GO:0000272: polysaccharide catabolic process | 2.51E-03 |
| 38 | GO:0005983: starch catabolic process | 2.75E-03 |
| 39 | GO:0019253: reductive pentose-phosphate cycle | 3.25E-03 |
| 40 | GO:0010207: photosystem II assembly | 3.25E-03 |
| 41 | GO:0071732: cellular response to nitric oxide | 3.51E-03 |
| 42 | GO:0009409: response to cold | 4.00E-03 |
| 43 | GO:0000027: ribosomal large subunit assembly | 4.06E-03 |
| 44 | GO:0051017: actin filament bundle assembly | 4.06E-03 |
| 45 | GO:0043622: cortical microtubule organization | 4.34E-03 |
| 46 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.34E-03 |
| 47 | GO:0061077: chaperone-mediated protein folding | 4.63E-03 |
| 48 | GO:0007005: mitochondrion organization | 4.93E-03 |
| 49 | GO:0035428: hexose transmembrane transport | 4.93E-03 |
| 50 | GO:0006012: galactose metabolic process | 5.23E-03 |
| 51 | GO:0009411: response to UV | 5.23E-03 |
| 52 | GO:0071369: cellular response to ethylene stimulus | 5.23E-03 |
| 53 | GO:0000413: protein peptidyl-prolyl isomerization | 6.18E-03 |
| 54 | GO:0042631: cellular response to water deprivation | 6.18E-03 |
| 55 | GO:0046323: glucose import | 6.51E-03 |
| 56 | GO:0006457: protein folding | 6.68E-03 |
| 57 | GO:0015986: ATP synthesis coupled proton transport | 6.84E-03 |
| 58 | GO:0019252: starch biosynthetic process | 7.19E-03 |
| 59 | GO:0000302: response to reactive oxygen species | 7.53E-03 |
| 60 | GO:0009658: chloroplast organization | 7.82E-03 |
| 61 | GO:0071281: cellular response to iron ion | 8.25E-03 |
| 62 | GO:0010027: thylakoid membrane organization | 9.74E-03 |
| 63 | GO:0009627: systemic acquired resistance | 1.05E-02 |
| 64 | GO:0008219: cell death | 1.17E-02 |
| 65 | GO:0007568: aging | 1.30E-02 |
| 66 | GO:0009853: photorespiration | 1.39E-02 |
| 67 | GO:0055114: oxidation-reduction process | 1.41E-02 |
| 68 | GO:0034599: cellular response to oxidative stress | 1.43E-02 |
| 69 | GO:0042542: response to hydrogen peroxide | 1.61E-02 |
| 70 | GO:0006810: transport | 1.92E-02 |
| 71 | GO:0009585: red, far-red light phototransduction | 2.05E-02 |
| 72 | GO:0046686: response to cadmium ion | 2.07E-02 |
| 73 | GO:0042744: hydrogen peroxide catabolic process | 3.39E-02 |
| 74 | GO:0009793: embryo development ending in seed dormancy | 3.39E-02 |
| 75 | GO:0006633: fatty acid biosynthetic process | 3.64E-02 |
| 76 | GO:0040008: regulation of growth | 3.77E-02 |
| 77 | GO:0007623: circadian rhythm | 3.89E-02 |
| 78 | GO:0010468: regulation of gene expression | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 3 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 4 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 5 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 6 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 8 | GO:0051060: pullulanase activity | 0.00E+00 |
| 9 | GO:0019843: rRNA binding | 1.82E-11 |
| 10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.77E-09 |
| 11 | GO:0005528: FK506 binding | 5.08E-08 |
| 12 | GO:0003735: structural constituent of ribosome | 7.78E-08 |
| 13 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 7.39E-05 |
| 14 | GO:0004853: uroporphyrinogen decarboxylase activity | 7.39E-05 |
| 15 | GO:0004618: phosphoglycerate kinase activity | 1.77E-04 |
| 16 | GO:0010297: heteropolysaccharide binding | 1.77E-04 |
| 17 | GO:0003839: gamma-glutamylcyclotransferase activity | 1.77E-04 |
| 18 | GO:0008967: phosphoglycolate phosphatase activity | 1.77E-04 |
| 19 | GO:0016630: protochlorophyllide reductase activity | 1.77E-04 |
| 20 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.77E-04 |
| 21 | GO:0070402: NADPH binding | 2.99E-04 |
| 22 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 2.99E-04 |
| 23 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 2.99E-04 |
| 24 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.99E-04 |
| 25 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 2.99E-04 |
| 26 | GO:0008097: 5S rRNA binding | 4.32E-04 |
| 27 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.32E-04 |
| 28 | GO:0016149: translation release factor activity, codon specific | 4.32E-04 |
| 29 | GO:0004550: nucleoside diphosphate kinase activity | 4.32E-04 |
| 30 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 5.75E-04 |
| 31 | GO:0003959: NADPH dehydrogenase activity | 7.29E-04 |
| 32 | GO:0004709: MAP kinase kinase kinase activity | 8.91E-04 |
| 33 | GO:0004130: cytochrome-c peroxidase activity | 8.91E-04 |
| 34 | GO:0004556: alpha-amylase activity | 8.91E-04 |
| 35 | GO:0051920: peroxiredoxin activity | 1.06E-03 |
| 36 | GO:0016209: antioxidant activity | 1.43E-03 |
| 37 | GO:0004034: aldose 1-epimerase activity | 1.43E-03 |
| 38 | GO:0004033: aldo-keto reductase (NADP) activity | 1.43E-03 |
| 39 | GO:0003747: translation release factor activity | 1.83E-03 |
| 40 | GO:0047617: acyl-CoA hydrolase activity | 2.05E-03 |
| 41 | GO:0005384: manganese ion transmembrane transporter activity | 2.05E-03 |
| 42 | GO:0030234: enzyme regulator activity | 2.28E-03 |
| 43 | GO:0044183: protein binding involved in protein folding | 2.51E-03 |
| 44 | GO:0015095: magnesium ion transmembrane transporter activity | 3.00E-03 |
| 45 | GO:0031409: pigment binding | 3.78E-03 |
| 46 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.51E-03 |
| 47 | GO:0016853: isomerase activity | 6.84E-03 |
| 48 | GO:0005355: glucose transmembrane transporter activity | 6.84E-03 |
| 49 | GO:0050662: coenzyme binding | 6.84E-03 |
| 50 | GO:0004601: peroxidase activity | 7.82E-03 |
| 51 | GO:0051015: actin filament binding | 8.25E-03 |
| 52 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 8.98E-03 |
| 53 | GO:0008237: metallopeptidase activity | 8.98E-03 |
| 54 | GO:0016168: chlorophyll binding | 1.01E-02 |
| 55 | GO:0004222: metalloendopeptidase activity | 1.26E-02 |
| 56 | GO:0004364: glutathione transferase activity | 1.61E-02 |
| 57 | GO:0016491: oxidoreductase activity | 1.67E-02 |
| 58 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.76E-02 |
| 59 | GO:0051082: unfolded protein binding | 2.64E-02 |
| 60 | GO:0015144: carbohydrate transmembrane transporter activity | 3.52E-02 |
| 61 | GO:0005351: sugar:proton symporter activity | 3.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.97E-45 |
| 3 | GO:0009941: chloroplast envelope | 1.24E-33 |
| 4 | GO:0009570: chloroplast stroma | 1.61E-31 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 6.58E-30 |
| 6 | GO:0009579: thylakoid | 5.54E-28 |
| 7 | GO:0009534: chloroplast thylakoid | 8.56E-18 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 6.44E-17 |
| 9 | GO:0031977: thylakoid lumen | 3.10E-15 |
| 10 | GO:0005840: ribosome | 3.71E-09 |
| 11 | GO:0010319: stromule | 7.67E-07 |
| 12 | GO:0031969: chloroplast membrane | 8.20E-07 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.64E-05 |
| 14 | GO:0030095: chloroplast photosystem II | 1.50E-04 |
| 15 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.77E-04 |
| 16 | GO:0005960: glycine cleavage complex | 4.32E-04 |
| 17 | GO:0009544: chloroplast ATP synthase complex | 5.75E-04 |
| 18 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 8.91E-04 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 1.24E-03 |
| 20 | GO:0048046: apoplast | 1.34E-03 |
| 21 | GO:0010287: plastoglobule | 3.49E-03 |
| 22 | GO:0030076: light-harvesting complex | 3.51E-03 |
| 23 | GO:0009654: photosystem II oxygen evolving complex | 4.34E-03 |
| 24 | GO:0022626: cytosolic ribosome | 4.55E-03 |
| 25 | GO:0015935: small ribosomal subunit | 4.63E-03 |
| 26 | GO:0015629: actin cytoskeleton | 5.23E-03 |
| 27 | GO:0009523: photosystem II | 7.19E-03 |
| 28 | GO:0019898: extrinsic component of membrane | 7.19E-03 |
| 29 | GO:0016020: membrane | 9.45E-03 |
| 30 | GO:0022625: cytosolic large ribosomal subunit | 1.02E-02 |
| 31 | GO:0009707: chloroplast outer membrane | 1.17E-02 |
| 32 | GO:0015934: large ribosomal subunit | 1.30E-02 |
| 33 | GO:0009536: plastid | 1.53E-02 |
| 34 | GO:0005856: cytoskeleton | 1.80E-02 |
| 35 | GO:0009706: chloroplast inner membrane | 2.64E-02 |