| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 3 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 4 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 5 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0042407: cristae formation | 0.00E+00 |
| 7 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 8 | GO:0006573: valine metabolic process | 0.00E+00 |
| 9 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 10 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 11 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 12 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 13 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 14 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 15 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 16 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 17 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 18 | GO:0017038: protein import | 0.00E+00 |
| 19 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 20 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 21 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 22 | GO:0009658: chloroplast organization | 1.11E-07 |
| 23 | GO:0046739: transport of virus in multicellular host | 2.58E-06 |
| 24 | GO:0018026: peptidyl-lysine monomethylation | 3.08E-05 |
| 25 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.08E-05 |
| 26 | GO:1900871: chloroplast mRNA modification | 3.08E-05 |
| 27 | GO:1901259: chloroplast rRNA processing | 4.61E-05 |
| 28 | GO:0009451: RNA modification | 6.80E-05 |
| 29 | GO:0010027: thylakoid membrane organization | 1.23E-04 |
| 30 | GO:0015995: chlorophyll biosynthetic process | 1.74E-04 |
| 31 | GO:1900865: chloroplast RNA modification | 2.32E-04 |
| 32 | GO:0040008: regulation of growth | 2.83E-04 |
| 33 | GO:0009793: embryo development ending in seed dormancy | 2.95E-04 |
| 34 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.92E-04 |
| 35 | GO:0009416: response to light stimulus | 5.22E-04 |
| 36 | GO:0010207: photosystem II assembly | 5.96E-04 |
| 37 | GO:0016554: cytidine to uridine editing | 6.79E-04 |
| 38 | GO:0042793: transcription from plastid promoter | 6.79E-04 |
| 39 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 8.61E-04 |
| 40 | GO:0043266: regulation of potassium ion transport | 8.61E-04 |
| 41 | GO:0010063: positive regulation of trichoblast fate specification | 8.61E-04 |
| 42 | GO:0010480: microsporocyte differentiation | 8.61E-04 |
| 43 | GO:1904964: positive regulation of phytol biosynthetic process | 8.61E-04 |
| 44 | GO:0006438: valyl-tRNA aminoacylation | 8.61E-04 |
| 45 | GO:0006551: leucine metabolic process | 8.61E-04 |
| 46 | GO:0090558: plant epidermis development | 8.61E-04 |
| 47 | GO:0042371: vitamin K biosynthetic process | 8.61E-04 |
| 48 | GO:0043686: co-translational protein modification | 8.61E-04 |
| 49 | GO:2000021: regulation of ion homeostasis | 8.61E-04 |
| 50 | GO:0035987: endodermal cell differentiation | 8.61E-04 |
| 51 | GO:0051247: positive regulation of protein metabolic process | 8.61E-04 |
| 52 | GO:1902458: positive regulation of stomatal opening | 8.61E-04 |
| 53 | GO:0015904: tetracycline transport | 8.61E-04 |
| 54 | GO:2000905: negative regulation of starch metabolic process | 8.61E-04 |
| 55 | GO:0048363: mucilage pectin metabolic process | 8.61E-04 |
| 56 | GO:0009090: homoserine biosynthetic process | 8.61E-04 |
| 57 | GO:0070509: calcium ion import | 8.61E-04 |
| 58 | GO:0006419: alanyl-tRNA aminoacylation | 8.61E-04 |
| 59 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 8.61E-04 |
| 60 | GO:0044262: cellular carbohydrate metabolic process | 8.61E-04 |
| 61 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 8.61E-04 |
| 62 | GO:0042659: regulation of cell fate specification | 8.61E-04 |
| 63 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 8.61E-04 |
| 64 | GO:0000025: maltose catabolic process | 8.61E-04 |
| 65 | GO:1904966: positive regulation of vitamin E biosynthetic process | 8.61E-04 |
| 66 | GO:0009099: valine biosynthetic process | 8.97E-04 |
| 67 | GO:0030488: tRNA methylation | 8.97E-04 |
| 68 | GO:0042372: phylloquinone biosynthetic process | 8.97E-04 |
| 69 | GO:0009082: branched-chain amino acid biosynthetic process | 8.97E-04 |
| 70 | GO:0048437: floral organ development | 1.14E-03 |
| 71 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.49E-03 |
| 72 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.74E-03 |
| 73 | GO:0009657: plastid organization | 1.74E-03 |
| 74 | GO:0009097: isoleucine biosynthetic process | 1.74E-03 |
| 75 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.87E-03 |
| 76 | GO:0060359: response to ammonium ion | 1.87E-03 |
| 77 | GO:0048255: mRNA stabilization | 1.87E-03 |
| 78 | GO:0071668: plant-type cell wall assembly | 1.87E-03 |
| 79 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.87E-03 |
| 80 | GO:0080009: mRNA methylation | 1.87E-03 |
| 81 | GO:0009786: regulation of asymmetric cell division | 1.87E-03 |
| 82 | GO:0031648: protein destabilization | 1.87E-03 |
| 83 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.87E-03 |
| 84 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.87E-03 |
| 85 | GO:0006568: tryptophan metabolic process | 1.87E-03 |
| 86 | GO:2000123: positive regulation of stomatal complex development | 1.87E-03 |
| 87 | GO:0010024: phytochromobilin biosynthetic process | 1.87E-03 |
| 88 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.87E-03 |
| 89 | GO:0030187: melatonin biosynthetic process | 1.87E-03 |
| 90 | GO:0034599: cellular response to oxidative stress | 1.92E-03 |
| 91 | GO:0009742: brassinosteroid mediated signaling pathway | 1.95E-03 |
| 92 | GO:0006662: glycerol ether metabolic process | 2.21E-03 |
| 93 | GO:0010305: leaf vascular tissue pattern formation | 2.21E-03 |
| 94 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.48E-03 |
| 95 | GO:0009098: leucine biosynthetic process | 2.48E-03 |
| 96 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.91E-03 |
| 97 | GO:0010623: programmed cell death involved in cell development | 3.10E-03 |
| 98 | GO:0006696: ergosterol biosynthetic process | 3.10E-03 |
| 99 | GO:0009405: pathogenesis | 3.10E-03 |
| 100 | GO:0006788: heme oxidation | 3.10E-03 |
| 101 | GO:0043157: response to cation stress | 3.10E-03 |
| 102 | GO:0005977: glycogen metabolic process | 3.10E-03 |
| 103 | GO:0030029: actin filament-based process | 3.10E-03 |
| 104 | GO:0048586: regulation of long-day photoperiodism, flowering | 3.10E-03 |
| 105 | GO:0006954: inflammatory response | 3.10E-03 |
| 106 | GO:0033591: response to L-ascorbic acid | 3.10E-03 |
| 107 | GO:0034051: negative regulation of plant-type hypersensitive response | 3.10E-03 |
| 108 | GO:0090708: specification of plant organ axis polarity | 3.10E-03 |
| 109 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 3.10E-03 |
| 110 | GO:0009773: photosynthetic electron transport in photosystem I | 3.37E-03 |
| 111 | GO:0005983: starch catabolic process | 3.87E-03 |
| 112 | GO:0019048: modulation by virus of host morphology or physiology | 4.52E-03 |
| 113 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 4.52E-03 |
| 114 | GO:0043572: plastid fission | 4.52E-03 |
| 115 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 4.52E-03 |
| 116 | GO:0042989: sequestering of actin monomers | 4.52E-03 |
| 117 | GO:2001141: regulation of RNA biosynthetic process | 4.52E-03 |
| 118 | GO:0090308: regulation of methylation-dependent chromatin silencing | 4.52E-03 |
| 119 | GO:0031048: chromatin silencing by small RNA | 4.52E-03 |
| 120 | GO:0009067: aspartate family amino acid biosynthetic process | 4.52E-03 |
| 121 | GO:0016556: mRNA modification | 4.52E-03 |
| 122 | GO:0010071: root meristem specification | 4.52E-03 |
| 123 | GO:0051513: regulation of monopolar cell growth | 4.52E-03 |
| 124 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.52E-03 |
| 125 | GO:0007231: osmosensory signaling pathway | 4.52E-03 |
| 126 | GO:0009647: skotomorphogenesis | 4.52E-03 |
| 127 | GO:0010306: rhamnogalacturonan II biosynthetic process | 4.52E-03 |
| 128 | GO:0009102: biotin biosynthetic process | 4.52E-03 |
| 129 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 4.52E-03 |
| 130 | GO:0010239: chloroplast mRNA processing | 4.52E-03 |
| 131 | GO:0010020: chloroplast fission | 4.98E-03 |
| 132 | GO:0070588: calcium ion transmembrane transport | 5.60E-03 |
| 133 | GO:0006221: pyrimidine nucleotide biosynthetic process | 6.11E-03 |
| 134 | GO:0010021: amylopectin biosynthetic process | 6.11E-03 |
| 135 | GO:0051567: histone H3-K9 methylation | 6.11E-03 |
| 136 | GO:0010508: positive regulation of autophagy | 6.11E-03 |
| 137 | GO:0008295: spermidine biosynthetic process | 6.11E-03 |
| 138 | GO:0010109: regulation of photosynthesis | 6.11E-03 |
| 139 | GO:0030104: water homeostasis | 6.11E-03 |
| 140 | GO:0033500: carbohydrate homeostasis | 6.11E-03 |
| 141 | GO:2000038: regulation of stomatal complex development | 6.11E-03 |
| 142 | GO:0042274: ribosomal small subunit biogenesis | 6.11E-03 |
| 143 | GO:2000306: positive regulation of photomorphogenesis | 6.11E-03 |
| 144 | GO:0006418: tRNA aminoacylation for protein translation | 7.68E-03 |
| 145 | GO:0010236: plastoquinone biosynthetic process | 7.87E-03 |
| 146 | GO:0031365: N-terminal protein amino acid modification | 7.87E-03 |
| 147 | GO:0080110: sporopollenin biosynthetic process | 7.87E-03 |
| 148 | GO:0016123: xanthophyll biosynthetic process | 7.87E-03 |
| 149 | GO:0016131: brassinosteroid metabolic process | 7.87E-03 |
| 150 | GO:0030041: actin filament polymerization | 7.87E-03 |
| 151 | GO:0032876: negative regulation of DNA endoreduplication | 7.87E-03 |
| 152 | GO:0032543: mitochondrial translation | 7.87E-03 |
| 153 | GO:0010375: stomatal complex patterning | 7.87E-03 |
| 154 | GO:0016458: gene silencing | 9.80E-03 |
| 155 | GO:0032973: amino acid export | 9.80E-03 |
| 156 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 9.80E-03 |
| 157 | GO:0010405: arabinogalactan protein metabolic process | 9.80E-03 |
| 158 | GO:0000741: karyogamy | 9.80E-03 |
| 159 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 9.80E-03 |
| 160 | GO:0006655: phosphatidylglycerol biosynthetic process | 9.80E-03 |
| 161 | GO:1902456: regulation of stomatal opening | 9.80E-03 |
| 162 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.80E-03 |
| 163 | GO:0009959: negative gravitropism | 9.80E-03 |
| 164 | GO:0033365: protein localization to organelle | 9.80E-03 |
| 165 | GO:0010189: vitamin E biosynthetic process | 1.19E-02 |
| 166 | GO:0042026: protein refolding | 1.19E-02 |
| 167 | GO:0009088: threonine biosynthetic process | 1.19E-02 |
| 168 | GO:2000033: regulation of seed dormancy process | 1.19E-02 |
| 169 | GO:0080086: stamen filament development | 1.19E-02 |
| 170 | GO:0009648: photoperiodism | 1.19E-02 |
| 171 | GO:2000067: regulation of root morphogenesis | 1.19E-02 |
| 172 | GO:0006458: 'de novo' protein folding | 1.19E-02 |
| 173 | GO:0017148: negative regulation of translation | 1.19E-02 |
| 174 | GO:0048280: vesicle fusion with Golgi apparatus | 1.19E-02 |
| 175 | GO:0009733: response to auxin | 1.22E-02 |
| 176 | GO:0010087: phloem or xylem histogenesis | 1.30E-02 |
| 177 | GO:0010197: polar nucleus fusion | 1.40E-02 |
| 178 | GO:0010182: sugar mediated signaling pathway | 1.40E-02 |
| 179 | GO:0009741: response to brassinosteroid | 1.40E-02 |
| 180 | GO:0010268: brassinosteroid homeostasis | 1.40E-02 |
| 181 | GO:0006400: tRNA modification | 1.41E-02 |
| 182 | GO:0051510: regulation of unidimensional cell growth | 1.41E-02 |
| 183 | GO:0030307: positive regulation of cell growth | 1.41E-02 |
| 184 | GO:0015693: magnesium ion transport | 1.41E-02 |
| 185 | GO:0010098: suspensor development | 1.41E-02 |
| 186 | GO:0048528: post-embryonic root development | 1.41E-02 |
| 187 | GO:0009772: photosynthetic electron transport in photosystem II | 1.41E-02 |
| 188 | GO:0043090: amino acid import | 1.41E-02 |
| 189 | GO:0009646: response to absence of light | 1.51E-02 |
| 190 | GO:0032875: regulation of DNA endoreduplication | 1.64E-02 |
| 191 | GO:2000070: regulation of response to water deprivation | 1.64E-02 |
| 192 | GO:0055075: potassium ion homeostasis | 1.64E-02 |
| 193 | GO:0046620: regulation of organ growth | 1.64E-02 |
| 194 | GO:0006353: DNA-templated transcription, termination | 1.64E-02 |
| 195 | GO:0000105: histidine biosynthetic process | 1.64E-02 |
| 196 | GO:0009231: riboflavin biosynthetic process | 1.64E-02 |
| 197 | GO:0001522: pseudouridine synthesis | 1.64E-02 |
| 198 | GO:0048564: photosystem I assembly | 1.64E-02 |
| 199 | GO:0006605: protein targeting | 1.64E-02 |
| 200 | GO:0000302: response to reactive oxygen species | 1.74E-02 |
| 201 | GO:0015979: photosynthesis | 1.83E-02 |
| 202 | GO:0032502: developmental process | 1.86E-02 |
| 203 | GO:0010583: response to cyclopentenone | 1.86E-02 |
| 204 | GO:0016032: viral process | 1.86E-02 |
| 205 | GO:0007186: G-protein coupled receptor signaling pathway | 1.89E-02 |
| 206 | GO:0032544: plastid translation | 1.89E-02 |
| 207 | GO:0071482: cellular response to light stimulus | 1.89E-02 |
| 208 | GO:0015996: chlorophyll catabolic process | 1.89E-02 |
| 209 | GO:0009734: auxin-activated signaling pathway | 1.91E-02 |
| 210 | GO:0055114: oxidation-reduction process | 2.03E-02 |
| 211 | GO:0007166: cell surface receptor signaling pathway | 2.04E-02 |
| 212 | GO:0000373: Group II intron splicing | 2.15E-02 |
| 213 | GO:0048507: meristem development | 2.15E-02 |
| 214 | GO:0000902: cell morphogenesis | 2.15E-02 |
| 215 | GO:0051865: protein autoubiquitination | 2.15E-02 |
| 216 | GO:0080144: amino acid homeostasis | 2.15E-02 |
| 217 | GO:0046916: cellular transition metal ion homeostasis | 2.15E-02 |
| 218 | GO:0051607: defense response to virus | 2.38E-02 |
| 219 | GO:0009086: methionine biosynthetic process | 2.43E-02 |
| 220 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 2.43E-02 |
| 221 | GO:0016573: histone acetylation | 2.43E-02 |
| 222 | GO:0031425: chloroplast RNA processing | 2.43E-02 |
| 223 | GO:2000280: regulation of root development | 2.43E-02 |
| 224 | GO:0016571: histone methylation | 2.43E-02 |
| 225 | GO:0009638: phototropism | 2.43E-02 |
| 226 | GO:0043067: regulation of programmed cell death | 2.43E-02 |
| 227 | GO:0005975: carbohydrate metabolic process | 2.53E-02 |
| 228 | GO:0006896: Golgi to vacuole transport | 2.71E-02 |
| 229 | GO:0030422: production of siRNA involved in RNA interference | 2.71E-02 |
| 230 | GO:0048829: root cap development | 2.71E-02 |
| 231 | GO:0009641: shade avoidance | 2.71E-02 |
| 232 | GO:0009299: mRNA transcription | 2.71E-02 |
| 233 | GO:0010162: seed dormancy process | 2.71E-02 |
| 234 | GO:0006352: DNA-templated transcription, initiation | 3.00E-02 |
| 235 | GO:0048229: gametophyte development | 3.00E-02 |
| 236 | GO:0006415: translational termination | 3.00E-02 |
| 237 | GO:0010216: maintenance of DNA methylation | 3.00E-02 |
| 238 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.00E-02 |
| 239 | GO:0009073: aromatic amino acid family biosynthetic process | 3.00E-02 |
| 240 | GO:0043085: positive regulation of catalytic activity | 3.00E-02 |
| 241 | GO:0006816: calcium ion transport | 3.00E-02 |
| 242 | GO:0016311: dephosphorylation | 3.13E-02 |
| 243 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.31E-02 |
| 244 | GO:0045037: protein import into chloroplast stroma | 3.31E-02 |
| 245 | GO:0010588: cotyledon vascular tissue pattern formation | 3.63E-02 |
| 246 | GO:2000012: regulation of auxin polar transport | 3.63E-02 |
| 247 | GO:0006006: glucose metabolic process | 3.63E-02 |
| 248 | GO:0009691: cytokinin biosynthetic process | 3.63E-02 |
| 249 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.63E-02 |
| 250 | GO:0010075: regulation of meristem growth | 3.63E-02 |
| 251 | GO:0009725: response to hormone | 3.63E-02 |
| 252 | GO:0030048: actin filament-based movement | 3.63E-02 |
| 253 | GO:0010628: positive regulation of gene expression | 3.63E-02 |
| 254 | GO:0009910: negative regulation of flower development | 3.80E-02 |
| 255 | GO:0006541: glutamine metabolic process | 3.95E-02 |
| 256 | GO:0009266: response to temperature stimulus | 3.95E-02 |
| 257 | GO:0009934: regulation of meristem structural organization | 3.95E-02 |
| 258 | GO:0048366: leaf development | 4.05E-02 |
| 259 | GO:0009845: seed germination | 4.13E-02 |
| 260 | GO:0016051: carbohydrate biosynthetic process | 4.17E-02 |
| 261 | GO:0045087: innate immune response | 4.17E-02 |
| 262 | GO:0090351: seedling development | 4.29E-02 |
| 263 | GO:0010030: positive regulation of seed germination | 4.29E-02 |
| 264 | GO:0019853: L-ascorbic acid biosynthetic process | 4.29E-02 |
| 265 | GO:0009790: embryo development | 4.53E-02 |
| 266 | GO:0007275: multicellular organism development | 4.61E-02 |
| 267 | GO:0006071: glycerol metabolic process | 4.63E-02 |
| 268 | GO:0006833: water transport | 4.63E-02 |
| 269 | GO:0000162: tryptophan biosynthetic process | 4.63E-02 |
| 270 | GO:0006839: mitochondrial transport | 4.74E-02 |
| 271 | GO:0030001: metal ion transport | 4.74E-02 |
| 272 | GO:0051017: actin filament bundle assembly | 4.98E-02 |
| 273 | GO:0006338: chromatin remodeling | 4.98E-02 |
| 274 | GO:0007010: cytoskeleton organization | 4.98E-02 |