co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G31890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
2	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
3	GO:0043488: regulation of mRNA stability	0.00E+00
4	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
5	GO:0017038: protein import	0.00E+00
6	GO:0090279: regulation of calcium ion import	0.00E+00
7	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
8	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
9	GO:0042820: vitamin B6 catabolic process	0.00E+00
10	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
11	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
12	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
13	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
14	GO:0042821: pyridoxal biosynthetic process	0.00E+00
15	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
16	GO:0042407: cristae formation	0.00E+00
17	GO:0008298: intracellular mRNA localization	0.00E+00
18	GO:0071474: cellular hyperosmotic response	0.00E+00
19	GO:0015882: L-ascorbic acid transport	0.00E+00
20	GO:0007172: signal complex assembly	0.00E+00
21	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
22	GO:0009658: chloroplast organization	3.57E-07
23	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.32E-05
24	GO:0005977: glycogen metabolic process	4.40E-05
25	GO:0009657: plastid organization	4.91E-05
26	GO:0010239: chloroplast mRNA processing	9.37E-05
27	GO:0046739: transport of virus in multicellular host	9.37E-05
28	GO:0010021: amylopectin biosynthetic process	1.61E-04
29	GO:0045038: protein import into chloroplast thylakoid membrane	2.46E-04
30	GO:0010027: thylakoid membrane organization	2.83E-04
31	GO:0015979: photosynthesis	3.99E-04
32	GO:0042372: phylloquinone biosynthetic process	4.62E-04
33	GO:1901259: chloroplast rRNA processing	4.62E-04
34	GO:0043007: maintenance of rDNA	5.49E-04
35	GO:1902458: positive regulation of stomatal opening	5.49E-04
36	GO:0010028: xanthophyll cycle	5.49E-04
37	GO:0005991: trehalose metabolic process	5.49E-04
38	GO:0000476: maturation of 4.5S rRNA	5.49E-04
39	GO:0009443: pyridoxal 5'-phosphate salvage	5.49E-04
40	GO:0000967: rRNA 5'-end processing	5.49E-04
41	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	5.49E-04
42	GO:0031426: polycistronic mRNA processing	5.49E-04
43	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	5.49E-04
44	GO:1904966: positive regulation of vitamin E biosynthetic process	5.49E-04
45	GO:0043266: regulation of potassium ion transport	5.49E-04
46	GO:0010442: guard cell morphogenesis	5.49E-04
47	GO:0010063: positive regulation of trichoblast fate specification	5.49E-04
48	GO:0005980: glycogen catabolic process	5.49E-04
49	GO:0010480: microsporocyte differentiation	5.49E-04
50	GO:1904964: positive regulation of phytol biosynthetic process	5.49E-04
51	GO:0042371: vitamin K biosynthetic process	5.49E-04
52	GO:0043686: co-translational protein modification	5.49E-04
53	GO:2000021: regulation of ion homeostasis	5.49E-04
54	GO:0048437: floral organ development	5.91E-04
55	GO:0006353: DNA-templated transcription, termination	7.35E-04
56	GO:0010497: plasmodesmata-mediated intercellular transport	8.95E-04
57	GO:0048507: meristem development	1.07E-03
58	GO:0008616: queuosine biosynthetic process	1.18E-03
59	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.18E-03
60	GO:0006568: tryptophan metabolic process	1.18E-03
61	GO:0010024: phytochromobilin biosynthetic process	1.18E-03
62	GO:0051262: protein tetramerization	1.18E-03
63	GO:0034470: ncRNA processing	1.18E-03
64	GO:0052541: plant-type cell wall cellulose metabolic process	1.18E-03
65	GO:0060359: response to ammonium ion	1.18E-03
66	GO:0018026: peptidyl-lysine monomethylation	1.18E-03
67	GO:0000256: allantoin catabolic process	1.18E-03
68	GO:1904143: positive regulation of carotenoid biosynthetic process	1.18E-03
69	GO:0006423: cysteinyl-tRNA aminoacylation	1.18E-03
70	GO:0001682: tRNA 5'-leader removal	1.18E-03
71	GO:0019684: photosynthesis, light reaction	1.70E-03
72	GO:0009773: photosynthetic electron transport in photosystem I	1.70E-03
73	GO:0006954: inflammatory response	1.94E-03
74	GO:0010136: ureide catabolic process	1.94E-03
75	GO:0034051: negative regulation of plant-type hypersensitive response	1.94E-03
76	GO:0006788: heme oxidation	1.94E-03
77	GO:0090153: regulation of sphingolipid biosynthetic process	1.94E-03
78	GO:0043157: response to cation stress	1.94E-03
79	GO:0016024: CDP-diacylglycerol biosynthetic process	1.95E-03
80	GO:0015995: chlorophyll biosynthetic process	2.39E-03
81	GO:0009934: regulation of meristem structural organization	2.50E-03
82	GO:0010207: photosystem II assembly	2.50E-03
83	GO:0010020: chloroplast fission	2.50E-03
84	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.81E-03
85	GO:0010071: root meristem specification	2.81E-03
86	GO:0009102: biotin biosynthetic process	2.81E-03
87	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.81E-03
88	GO:0009152: purine ribonucleotide biosynthetic process	2.81E-03
89	GO:0046653: tetrahydrofolate metabolic process	2.81E-03
90	GO:0019853: L-ascorbic acid biosynthetic process	2.81E-03
91	GO:0019048: modulation by virus of host morphology or physiology	2.81E-03
92	GO:0006145: purine nucleobase catabolic process	2.81E-03
93	GO:0043572: plastid fission	2.81E-03
94	GO:0031048: chromatin silencing by small RNA	2.81E-03
95	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	2.81E-03
96	GO:2001141: regulation of RNA biosynthetic process	2.81E-03
97	GO:0016556: mRNA modification	2.81E-03
98	GO:0010109: regulation of photosynthesis	3.79E-03
99	GO:0010107: potassium ion import	3.79E-03
100	GO:0006021: inositol biosynthetic process	3.79E-03
101	GO:0022622: root system development	3.79E-03
102	GO:0051567: histone H3-K9 methylation	3.79E-03
103	GO:0006418: tRNA aminoacylation for protein translation	3.84E-03
104	GO:0007017: microtubule-based process	3.84E-03
105	GO:0061077: chaperone-mediated protein folding	4.23E-03
106	GO:0009790: embryo development	4.50E-03
107	GO:0006730: one-carbon metabolic process	4.63E-03
108	GO:0016123: xanthophyll biosynthetic process	4.86E-03
109	GO:0080110: sporopollenin biosynthetic process	4.86E-03
110	GO:0032543: mitochondrial translation	4.86E-03
111	GO:0098719: sodium ion import across plasma membrane	4.86E-03
112	GO:0006564: L-serine biosynthetic process	4.86E-03
113	GO:0010236: plastoquinone biosynthetic process	4.86E-03
114	GO:0031365: N-terminal protein amino acid modification	4.86E-03
115	GO:0006508: proteolysis	5.13E-03
116	GO:0009959: negative gravitropism	6.02E-03
117	GO:0006655: phosphatidylglycerol biosynthetic process	6.02E-03
118	GO:0042793: transcription from plastid promoter	6.02E-03
119	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	6.02E-03
120	GO:0016554: cytidine to uridine editing	6.02E-03
121	GO:0016458: gene silencing	6.02E-03
122	GO:0050665: hydrogen peroxide biosynthetic process	6.02E-03
123	GO:0032973: amino acid export	6.02E-03
124	GO:0000741: karyogamy	6.02E-03
125	GO:0046855: inositol phosphate dephosphorylation	6.02E-03
126	GO:0009451: RNA modification	6.03E-03
127	GO:0009958: positive gravitropism	6.96E-03
128	GO:0006662: glycerol ether metabolic process	6.96E-03
129	GO:0010197: polar nucleus fusion	6.96E-03
130	GO:0010182: sugar mediated signaling pathway	6.96E-03
131	GO:0010305: leaf vascular tissue pattern formation	6.96E-03
132	GO:0080086: stamen filament development	7.28E-03
133	GO:0006458: 'de novo' protein folding	7.28E-03
134	GO:0017148: negative regulation of translation	7.28E-03
135	GO:0048280: vesicle fusion with Golgi apparatus	7.28E-03
136	GO:0042026: protein refolding	7.28E-03
137	GO:0009854: oxidative photosynthetic carbon pathway	7.28E-03
138	GO:0009646: response to absence of light	7.49E-03
139	GO:0009416: response to light stimulus	7.80E-03
140	GO:0019252: starch biosynthetic process	8.04E-03
141	GO:0032880: regulation of protein localization	8.61E-03
142	GO:0009772: photosynthetic electron transport in photosystem II	8.61E-03
143	GO:0043090: amino acid import	8.61E-03
144	GO:0010444: guard mother cell differentiation	8.61E-03
145	GO:0032502: developmental process	9.21E-03
146	GO:0006397: mRNA processing	9.26E-03
147	GO:0048367: shoot system development	9.67E-03
148	GO:0007155: cell adhesion	1.00E-02
149	GO:0048564: photosystem I assembly	1.00E-02
150	GO:0006605: protein targeting	1.00E-02
151	GO:0010078: maintenance of root meristem identity	1.00E-02
152	GO:2000070: regulation of response to water deprivation	1.00E-02
153	GO:0042255: ribosome assembly	1.00E-02
154	GO:0046620: regulation of organ growth	1.00E-02
155	GO:0055075: potassium ion homeostasis	1.00E-02
156	GO:0070413: trehalose metabolism in response to stress	1.00E-02
157	GO:0017004: cytochrome complex assembly	1.15E-02
158	GO:0071482: cellular response to light stimulus	1.15E-02
159	GO:0015996: chlorophyll catabolic process	1.15E-02
160	GO:0007186: G-protein coupled receptor signaling pathway	1.15E-02
161	GO:0010204: defense response signaling pathway, resistance gene-independent	1.15E-02
162	GO:0032544: plastid translation	1.15E-02
163	GO:0043562: cellular response to nitrogen levels	1.15E-02
164	GO:0009742: brassinosteroid mediated signaling pathway	1.27E-02
165	GO:0000902: cell morphogenesis	1.31E-02
166	GO:0009821: alkaloid biosynthetic process	1.31E-02
167	GO:0098656: anion transmembrane transport	1.31E-02
168	GO:0046685: response to arsenic-containing substance	1.31E-02
169	GO:0080144: amino acid homeostasis	1.31E-02
170	GO:0090333: regulation of stomatal closure	1.31E-02
171	GO:0046916: cellular transition metal ion homeostasis	1.31E-02
172	GO:0051453: regulation of intracellular pH	1.48E-02
173	GO:0009638: phototropism	1.48E-02
174	GO:0043067: regulation of programmed cell death	1.48E-02
175	GO:0006779: porphyrin-containing compound biosynthetic process	1.48E-02
176	GO:1900865: chloroplast RNA modification	1.48E-02
177	GO:0031425: chloroplast RNA processing	1.48E-02
178	GO:0048481: plant ovule development	1.64E-02
179	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.65E-02
180	GO:0006896: Golgi to vacuole transport	1.65E-02
181	GO:0006782: protoporphyrinogen IX biosynthetic process	1.65E-02
182	GO:0030422: production of siRNA involved in RNA interference	1.65E-02
183	GO:0045036: protein targeting to chloroplast	1.65E-02
184	GO:0009058: biosynthetic process	1.68E-02
185	GO:0009684: indoleacetic acid biosynthetic process	1.83E-02
186	GO:0009089: lysine biosynthetic process via diaminopimelate	1.83E-02
187	GO:0055114: oxidation-reduction process	1.83E-02
188	GO:0009073: aromatic amino acid family biosynthetic process	1.83E-02
189	GO:0006352: DNA-templated transcription, initiation	1.83E-02
190	GO:0018119: peptidyl-cysteine S-nitrosylation	1.83E-02
191	GO:0048229: gametophyte development	1.83E-02
192	GO:0006415: translational termination	1.83E-02
193	GO:0048527: lateral root development	1.90E-02
194	GO:0006790: sulfur compound metabolic process	2.01E-02
195	GO:0045037: protein import into chloroplast stroma	2.01E-02
196	GO:0045454: cell redox homeostasis	2.05E-02
197	GO:0045087: innate immune response	2.08E-02
198	GO:0006413: translational initiation	2.16E-02
199	GO:0034599: cellular response to oxidative stress	2.18E-02
200	GO:0050826: response to freezing	2.20E-02
201	GO:0009718: anthocyanin-containing compound biosynthetic process	2.20E-02
202	GO:0010075: regulation of meristem growth	2.20E-02
203	GO:0009767: photosynthetic electron transport chain	2.20E-02
204	GO:0010628: positive regulation of gene expression	2.20E-02
205	GO:0010588: cotyledon vascular tissue pattern formation	2.20E-02
206	GO:2000012: regulation of auxin polar transport	2.20E-02
207	GO:0009266: response to temperature stimulus	2.40E-02
208	GO:0048467: gynoecium development	2.40E-02
209	GO:0010143: cutin biosynthetic process	2.40E-02
210	GO:0010030: positive regulation of seed germination	2.61E-02
211	GO:0046854: phosphatidylinositol phosphorylation	2.61E-02
212	GO:0016042: lipid catabolic process	2.68E-02
213	GO:0007166: cell surface receptor signaling pathway	2.79E-02
214	GO:0006071: glycerol metabolic process	2.82E-02
215	GO:0008380: RNA splicing	2.94E-02
216	GO:0009793: embryo development ending in seed dormancy	2.95E-02
217	GO:0005992: trehalose biosynthetic process	3.03E-02
218	GO:0006855: drug transmembrane transport	3.13E-02
219	GO:0010026: trichome differentiation	3.25E-02
220	GO:0042538: hyperosmotic salinity response	3.37E-02
221	GO:0019915: lipid storage	3.48E-02
222	GO:0006306: DNA methylation	3.48E-02
223	GO:0019748: secondary metabolic process	3.71E-02
224	GO:0030245: cellulose catabolic process	3.71E-02
225	GO:0051603: proteolysis involved in cellular protein catabolic process	3.74E-02
226	GO:0006012: galactose metabolic process	3.95E-02
227	GO:0009686: gibberellin biosynthetic process	3.95E-02
228	GO:0006417: regulation of translation	4.00E-02
229	GO:0010584: pollen exine formation	4.19E-02
230	GO:0042127: regulation of cell proliferation	4.19E-02
231	GO:0016117: carotenoid biosynthetic process	4.44E-02
232	GO:0008284: positive regulation of cell proliferation	4.44E-02
233	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.44E-02
234	GO:0042147: retrograde transport, endosome to Golgi	4.44E-02
235	GO:0048653: anther development	4.69E-02
236	GO:0042631: cellular response to water deprivation	4.69E-02
237	GO:0080022: primary root development	4.69E-02
238	GO:0008033: tRNA processing	4.69E-02
239	GO:0010087: phloem or xylem histogenesis	4.69E-02
240	GO:0006342: chromatin silencing	4.94E-02
241	GO:0009741: response to brassinosteroid	4.94E-02
242	GO:0010268: brassinosteroid homeostasis	4.94E-02
243	GO:0006885: regulation of pH	4.94E-02
244	GO:0048868: pollen tube development	4.94E-02
245	GO:0048366: leaf development	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004076: biotin synthase activity	0.00E+00
2	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
3	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
4	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
5	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
6	GO:0004823: leucine-tRNA ligase activity	0.00E+00
7	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
8	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
9	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
10	GO:0019156: isoamylase activity	1.32E-05
11	GO:0002161: aminoacyl-tRNA editing activity	4.40E-05
12	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.46E-04
13	GO:0004556: alpha-amylase activity	3.46E-04
14	GO:0005528: FK506 binding	3.81E-04
15	GO:0010347: L-galactose-1-phosphate phosphatase activity	5.49E-04
16	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	5.49E-04
17	GO:0005227: calcium activated cation channel activity	5.49E-04
18	GO:0051777: ent-kaurenoate oxidase activity	5.49E-04
19	GO:0004425: indole-3-glycerol-phosphate synthase activity	5.49E-04
20	GO:0004856: xylulokinase activity	5.49E-04
21	GO:0004645: phosphorylase activity	5.49E-04
22	GO:0016776: phosphotransferase activity, phosphate group as acceptor	5.49E-04
23	GO:0008184: glycogen phosphorylase activity	5.49E-04
24	GO:0008158: hedgehog receptor activity	5.49E-04
25	GO:0080042: ADP-glucose pyrophosphohydrolase activity	5.49E-04
26	GO:0005080: protein kinase C binding	5.49E-04
27	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	5.49E-04
28	GO:0042586: peptide deformylase activity	5.49E-04
29	GO:0003727: single-stranded RNA binding	6.91E-04
30	GO:0004033: aldo-keto reductase (NADP) activity	7.35E-04
31	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.17E-03
32	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.18E-03
33	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.18E-03
34	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.18E-03
35	GO:0004617: phosphoglycerate dehydrogenase activity	1.18E-03
36	GO:0052832: inositol monophosphate 3-phosphatase activity	1.18E-03
37	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.18E-03
38	GO:0004312: fatty acid synthase activity	1.18E-03
39	GO:0004817: cysteine-tRNA ligase activity	1.18E-03
40	GO:0008479: queuine tRNA-ribosyltransferase activity	1.18E-03
41	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.18E-03
42	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.18E-03
43	GO:0008934: inositol monophosphate 1-phosphatase activity	1.18E-03
44	GO:0052833: inositol monophosphate 4-phosphatase activity	1.18E-03
45	GO:0008864: formyltetrahydrofolate deformylase activity	1.94E-03
46	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.94E-03
47	GO:0015462: ATPase-coupled protein transmembrane transporter activity	1.94E-03
48	GO:0004180: carboxypeptidase activity	1.94E-03
49	GO:0003913: DNA photolyase activity	1.94E-03
50	GO:0004751: ribose-5-phosphate isomerase activity	1.94E-03
51	GO:0004848: ureidoglycolate hydrolase activity	1.94E-03
52	GO:0004148: dihydrolipoyl dehydrogenase activity	1.94E-03
53	GO:0016805: dipeptidase activity	1.94E-03
54	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.94E-03
55	GO:0070402: NADPH binding	1.94E-03
56	GO:0003723: RNA binding	2.13E-03
57	GO:0008266: poly(U) RNA binding	2.50E-03
58	GO:0005525: GTP binding	2.62E-03
59	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.81E-03
60	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	2.81E-03
61	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.81E-03
62	GO:0048027: mRNA 5'-UTR binding	2.81E-03
63	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.81E-03
64	GO:0043023: ribosomal large subunit binding	2.81E-03
65	GO:0035197: siRNA binding	2.81E-03
66	GO:0016851: magnesium chelatase activity	2.81E-03
67	GO:0016788: hydrolase activity, acting on ester bonds	3.07E-03
68	GO:0004222: metalloendopeptidase activity	3.09E-03
69	GO:0001053: plastid sigma factor activity	3.79E-03
70	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.79E-03
71	GO:0004045: aminoacyl-tRNA hydrolase activity	3.79E-03
72	GO:0016987: sigma factor activity	3.79E-03
73	GO:0004392: heme oxygenase (decyclizing) activity	3.79E-03
74	GO:0008891: glycolate oxidase activity	3.79E-03
75	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	3.79E-03
76	GO:0043495: protein anchor	3.79E-03
77	GO:0004659: prenyltransferase activity	3.79E-03
78	GO:0016279: protein-lysine N-methyltransferase activity	3.79E-03
79	GO:0003993: acid phosphatase activity	3.91E-03
80	GO:0033612: receptor serine/threonine kinase binding	4.23E-03
81	GO:0016846: carbon-sulfur lyase activity	4.86E-03
82	GO:0004185: serine-type carboxypeptidase activity	5.11E-03
83	GO:0052689: carboxylic ester hydrolase activity	5.18E-03
84	GO:0003824: catalytic activity	5.36E-03
85	GO:0004812: aminoacyl-tRNA ligase activity	5.97E-03
86	GO:0047134: protein-disulfide reductase activity	5.97E-03
87	GO:0004526: ribonuclease P activity	6.02E-03
88	GO:0016208: AMP binding	6.02E-03
89	GO:0015081: sodium ion transmembrane transporter activity	6.02E-03
90	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	6.02E-03
91	GO:0008200: ion channel inhibitor activity	6.02E-03
92	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	6.02E-03
93	GO:0008195: phosphatidate phosphatase activity	7.28E-03
94	GO:0003730: mRNA 3'-UTR binding	7.28E-03
95	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	7.28E-03
96	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	7.28E-03
97	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	7.28E-03
98	GO:0005261: cation channel activity	7.28E-03
99	GO:0004791: thioredoxin-disulfide reductase activity	7.49E-03
100	GO:0003924: GTPase activity	8.60E-03
101	GO:0019899: enzyme binding	8.61E-03
102	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	9.82E-03
103	GO:0004519: endonuclease activity	9.96E-03
104	GO:0016791: phosphatase activity	1.05E-02
105	GO:0005200: structural constituent of cytoskeleton	1.11E-02
106	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.11E-02
107	GO:0008237: metallopeptidase activity	1.11E-02
108	GO:0046914: transition metal ion binding	1.15E-02
109	GO:0016597: amino acid binding	1.18E-02
110	GO:0003747: translation release factor activity	1.31E-02
111	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.31E-02
112	GO:0016844: strictosidine synthase activity	1.48E-02
113	GO:0015020: glucuronosyltransferase activity	1.65E-02
114	GO:0015238: drug transmembrane transporter activity	1.72E-02
115	GO:0044183: protein binding involved in protein folding	1.83E-02
116	GO:0047372: acylglycerol lipase activity	1.83E-02
117	GO:0015386: potassium:proton antiporter activity	1.83E-02
118	GO:0008559: xenobiotic-transporting ATPase activity	1.83E-02
119	GO:0008378: galactosyltransferase activity	2.01E-02
120	GO:0004521: endoribonuclease activity	2.01E-02
121	GO:0000049: tRNA binding	2.01E-02
122	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.16E-02
123	GO:0031072: heat shock protein binding	2.20E-02
124	GO:0009982: pseudouridine synthase activity	2.20E-02
125	GO:0003725: double-stranded RNA binding	2.20E-02
126	GO:0005315: inorganic phosphate transmembrane transporter activity	2.20E-02
127	GO:0004089: carbonate dehydratase activity	2.20E-02
128	GO:0008083: growth factor activity	2.40E-02
129	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.40E-02
130	GO:0003743: translation initiation factor activity	2.86E-02
131	GO:0043621: protein self-association	2.91E-02
132	GO:0035091: phosphatidylinositol binding	2.91E-02
133	GO:0042802: identical protein binding	3.18E-02
134	GO:0004176: ATP-dependent peptidase activity	3.48E-02
135	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.62E-02
136	GO:0003690: double-stranded DNA binding	3.74E-02
137	GO:0022891: substrate-specific transmembrane transporter activity	3.95E-02
138	GO:0030570: pectate lyase activity	3.95E-02
139	GO:0008810: cellulase activity	3.95E-02
140	GO:0008514: organic anion transmembrane transporter activity	4.19E-02
141	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.41E-02
142	GO:0008080: N-acetyltransferase activity	4.94E-02
143	GO:0016491: oxidoreductase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	3.78E-31
3	GO:0009570: chloroplast stroma	9.50E-24
4	GO:0009941: chloroplast envelope	1.54E-07
5	GO:0009295: nucleoid	1.07E-06
6	GO:0009535: chloroplast thylakoid membrane	1.55E-06
7	GO:0031969: chloroplast membrane	8.39E-06
8	GO:0009508: plastid chromosome	9.78E-06
9	GO:0009543: chloroplast thylakoid lumen	1.97E-05
10	GO:0030529: intracellular ribonucleoprotein complex	2.69E-05
11	GO:0009536: plastid	3.35E-04
12	GO:0009654: photosystem II oxygen evolving complex	4.35E-04
13	GO:0009706: chloroplast inner membrane	5.21E-04
14	GO:0009344: nitrite reductase complex [NAD(P)H]	5.49E-04
15	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.07E-03
16	GO:0080085: signal recognition particle, chloroplast targeting	1.18E-03
17	GO:0009579: thylakoid	1.22E-03
18	GO:0009528: plastid inner membrane	1.94E-03
19	GO:0010007: magnesium chelatase complex	1.94E-03
20	GO:0009707: chloroplast outer membrane	2.72E-03
21	GO:0015630: microtubule cytoskeleton	2.81E-03
22	GO:0005719: nuclear euchromatin	2.81E-03
23	GO:0030658: transport vesicle membrane	2.81E-03
24	GO:0030663: COPI-coated vesicle membrane	3.79E-03
25	GO:0009527: plastid outer membrane	3.79E-03
26	GO:0009534: chloroplast thylakoid	3.82E-03
27	GO:0019898: extrinsic component of membrane	8.04E-03
28	GO:0012507: ER to Golgi transport vesicle membrane	1.00E-02
29	GO:0009501: amyloplast	1.00E-02
30	GO:0010319: stromule	1.11E-02
31	GO:0009539: photosystem II reaction center	1.15E-02
32	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.15E-02
33	GO:0042644: chloroplast nucleoid	1.31E-02
34	GO:0045298: tubulin complex	1.31E-02
35	GO:0015030: Cajal body	1.48E-02
36	GO:0030125: clathrin vesicle coat	1.65E-02
37	GO:0000418: DNA-directed RNA polymerase IV complex	1.65E-02
38	GO:0000325: plant-type vacuole	1.90E-02
39	GO:0030095: chloroplast photosystem II	2.40E-02
40	GO:0031977: thylakoid lumen	2.48E-02
41	GO:0016021: integral component of membrane	2.80E-02
42	GO:0005886: plasma membrane	3.01E-02
43	GO:0043231: intracellular membrane-bounded organelle	3.23E-02
44	GO:0042651: thylakoid membrane	3.25E-02
45	GO:0046658: anchored component of plasma membrane	3.35E-02
46	GO:0009532: plastid stroma	3.48E-02
47	GO:0005618: cell wall	4.63E-02